RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 THUMPD2Q9BTF0 503 aaKnown RBP22.13■■□□□ 1.13
VAT1-204ENST00000587147 KCNQ3O43525 872 aa22.12■■□□□ 1.13
VAT1-204ENST00000587147 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
VAT1-204ENST00000587147 MSH5O43196 834 aa22.11■■□□□ 1.13
VAT1-204ENST00000587147 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
VAT1-204ENST00000587147 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
VAT1-204ENST00000587147 SOS1Q07889 1333 aaPredicted RBP22.1■■□□□ 1.13
VAT1-204ENST00000587147 CHL1O00533 1208 aa22.1■■□□□ 1.13
VAT1-204ENST00000587147 PHF14O94880 888 aa22.1■■□□□ 1.13
VAT1-204ENST00000587147 POLD1P28340 1107 aa22.1■■□□□ 1.13
VAT1-204ENST00000587147 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
VAT1-204ENST00000587147 DIEXFQ68CQ4 756 aaKnown RBP22.1■■□□□ 1.13
VAT1-204ENST00000587147 CFAP44Q96MT7 982 aa22.09■■□□□ 1.13
VAT1-204ENST00000587147 ATF5Q9Y2D1 282 aaPredicted RBP22.09■■□□□ 1.13
VAT1-204ENST00000587147 RFC4P35249 363 aa22.08■■□□□ 1.13
VAT1-204ENST00000587147 IL6STP40189 918 aaPredicted RBP22.08■■□□□ 1.13
VAT1-204ENST00000587147 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
VAT1-204ENST00000587147 ZBTB1Q9Y2K1 713 aa22.08■■□□□ 1.13
VAT1-204ENST00000587147 A0A087WZG4 1122 aa22.07■■□□□ 1.12
VAT1-204ENST00000587147 GIGYF1O75420 1035 aaPredicted RBP22.07■■□□□ 1.12
VAT1-204ENST00000587147 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
VAT1-204ENST00000587147 MIS18AQ9NYP9 233 aa22.07■■□□□ 1.12
VAT1-204ENST00000587147 PPP1R1BQ9UD71 204 aaPredicted RBP22.07■■□□□ 1.12
VAT1-204ENST00000587147 COL15A1P39059 1388 aa22.07■■□□□ 1.12
VAT1-204ENST00000587147 EIF5P55010 431 aaKnown RBP22.06■■□□□ 1.12
VAT1-204ENST00000587147 GNAI1P63096 354 aa22.06■■□□□ 1.12
VAT1-204ENST00000587147 NLGN1Q8N2Q7 840 aa22.06■■□□□ 1.12
VAT1-204ENST00000587147 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
VAT1-204ENST00000587147 ZNF853P0CG23 659 aa22.05■■□□□ 1.12
VAT1-204ENST00000587147 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
VAT1-204ENST00000587147 IL16Q14005 1332 aa22.05■■□□□ 1.12
VAT1-204ENST00000587147 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
VAT1-204ENST00000587147 HOXB7P09629 217 aa22.04■■□□□ 1.12
VAT1-204ENST00000587147 ARXQ96QS3 562 aa22.04■■□□□ 1.12
VAT1-204ENST00000587147 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
VAT1-204ENST00000587147 RGL2O15211 777 aa22.03■■□□□ 1.12
VAT1-204ENST00000587147 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
VAT1-204ENST00000587147 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
VAT1-204ENST00000587147 ZPR1O75312 459 aa22.02■■□□□ 1.12
VAT1-204ENST00000587147 GYS1P13807 737 aa22.02■■□□□ 1.12
VAT1-204ENST00000587147 WWC1Q8IX03 1113 aa22.02■■□□□ 1.12
VAT1-204ENST00000587147 CANXP27824 592 aaKnown RBP22.01■■□□□ 1.11
VAT1-204ENST00000587147 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
VAT1-204ENST00000587147 SMIM5Q71RC9 77 aa22■■□□□ 1.11
VAT1-204ENST00000587147 WDR63Q8IWG1 891 aa22■■□□□ 1.11
VAT1-204ENST00000587147 PRAMEF22A3QJZ6 481 aa21.99■■□□□ 1.11
VAT1-204ENST00000587147 A1BGP04217 495 aa21.99■■□□□ 1.11
VAT1-204ENST00000587147 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
VAT1-204ENST00000587147 MSL1Q68DK7 614 aa21.98■■□□□ 1.11
VAT1-204ENST00000587147 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
VAT1-204ENST00000587147 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
VAT1-204ENST00000587147 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
VAT1-204ENST00000587147 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
VAT1-204ENST00000587147 MMP10P09238 476 aa21.95■■□□□ 1.1
VAT1-204ENST00000587147 USPL1Q5W0Q7 1092 aa21.95■■□□□ 1.1
VAT1-204ENST00000587147 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
VAT1-204ENST00000587147 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
VAT1-204ENST00000587147 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
VAT1-204ENST00000587147 CLEC4GQ6UXB4 293 aa21.94■■□□□ 1.1
VAT1-204ENST00000587147 FHDC1Q9C0D6 1143 aaPredicted RBP21.94■■□□□ 1.1
VAT1-204ENST00000587147 SRP68Q9UHB9 627 aaKnown RBP21.94■■□□□ 1.1
VAT1-204ENST00000587147 FKBP8Q14318 412 aa21.93■■□□□ 1.1
VAT1-204ENST00000587147 DZIP3Q86Y13 1208 aaKnown RBP21.93■■□□□ 1.1
VAT1-204ENST00000587147 SYT17Q9BSW7 474 aa21.93■■□□□ 1.1
VAT1-204ENST00000587147 KIF13BQ9NQT8 1826 aa21.93■■□□□ 1.1
VAT1-204ENST00000587147 TM4SF1P30408 202 aa21.92■■□□□ 1.1
VAT1-204ENST00000587147 ZNF652Q9Y2D9 606 aa21.92■■□□□ 1.1
VAT1-204ENST00000587147 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
VAT1-204ENST00000587147 ZNF521Q96K83 1311 aa21.91■■□□□ 1.1
VAT1-204ENST00000587147 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
VAT1-204ENST00000587147 MIER1Q8N108 512 aa21.91■■□□□ 1.1
VAT1-204ENST00000587147 BCL2L12Q9HB09 334 aa21.91■■□□□ 1.1
VAT1-204ENST00000587147 NRXN2Q9P2S2 1712 aa21.91■■□□□ 1.1
VAT1-204ENST00000587147 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
VAT1-204ENST00000587147 DUSP27Q5VZP5 1158 aa21.9■■□□□ 1.1
VAT1-204ENST00000587147 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
VAT1-204ENST00000587147 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
VAT1-204ENST00000587147 PDIA6Q15084 440 aa21.89■■□□□ 1.09
VAT1-204ENST00000587147 HDGFL1Q5TGJ6 251 aa21.89■■□□□ 1.09
VAT1-204ENST00000587147 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
VAT1-204ENST00000587147 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.09
VAT1-204ENST00000587147 EIF2S2P20042 333 aaKnown RBP21.88■■□□□ 1.09
VAT1-204ENST00000587147 LRP10Q7Z4F1 713 aa21.88■■□□□ 1.09
VAT1-204ENST00000587147 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
VAT1-204ENST00000587147 DBF4Q9UBU7 674 aaPredicted RBP21.88■■□□□ 1.09
VAT1-204ENST00000587147 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
VAT1-204ENST00000587147 NFIXQ14938 502 aa21.87■■□□□ 1.09
VAT1-204ENST00000587147 KIF6Q6ZMV9 814 aa21.87■■□□□ 1.09
VAT1-204ENST00000587147 CARMIL3Q8ND23 1372 aa21.87■■□□□ 1.09
VAT1-204ENST00000587147 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
VAT1-204ENST00000587147 DDR1Q08345 913 aa21.86■■□□□ 1.09
VAT1-204ENST00000587147 KRT24Q2M2I5 525 aa21.86■■□□□ 1.09
VAT1-204ENST00000587147 MAP3K15Q6ZN16 1313 aa21.85■■□□□ 1.09
VAT1-204ENST00000587147 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
VAT1-204ENST00000587147 MYL6BP14649 208 aa21.85■■□□□ 1.09
VAT1-204ENST00000587147 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
VAT1-204ENST00000587147 ATP10DQ9P241 1426 aa21.84■■□□□ 1.09
VAT1-204ENST00000587147 TGFB2P61812 414 aa21.84■■□□□ 1.09
VAT1-204ENST00000587147 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
VAT1-204ENST00000587147 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms