RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 DPEP1P16444 411 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 NARFQ9UHQ1 456 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
HDAC5-203ENST00000586339 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
HDAC5-203ENST00000586339 STARD3NLO95772 234 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 TM4SF1P30408 202 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 USPL1Q5W0Q7 1092 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 IL17REQ8NFR9 667 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 RSPH6AQ9H0K4 717 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 CEP350Q5VT06 3117 aa18.85■□□□□ 0.61
HDAC5-203ENST00000586339 HEG1Q9ULI3 1381 aa18.84■□□□□ 0.61
HDAC5-203ENST00000586339 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
HDAC5-203ENST00000586339 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
HDAC5-203ENST00000586339 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
HDAC5-203ENST00000586339 FCHSD2O94868 740 aa18.83■□□□□ 0.6
HDAC5-203ENST00000586339 KCNA3P22001 575 aa18.83■□□□□ 0.6
HDAC5-203ENST00000586339 PPP2R1AP30153 589 aa18.83■□□□□ 0.6
HDAC5-203ENST00000586339 SBF1O95248 1867 aa18.83■□□□□ 0.6
HDAC5-203ENST00000586339 ZNF496Q96IT1 587 aaPredicted RBP18.82■□□□□ 0.6
HDAC5-203ENST00000586339 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
HDAC5-203ENST00000586339 A0A087WZG4 1122 aa18.81■□□□□ 0.6
HDAC5-203ENST00000586339 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
HDAC5-203ENST00000586339 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
HDAC5-203ENST00000586339 EIF5P55010 431 aaKnown RBP18.8■□□□□ 0.6
HDAC5-203ENST00000586339 NFIXQ14938 502 aa18.8■□□□□ 0.6
HDAC5-203ENST00000586339 FMNL2Q96PY5 1086 aa18.8■□□□□ 0.6
HDAC5-203ENST00000586339 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
HDAC5-203ENST00000586339 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
HDAC5-203ENST00000586339 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
HDAC5-203ENST00000586339 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
HDAC5-203ENST00000586339 DALRD3Q5D0E6 543 aaKnown RBP18.79■□□□□ 0.6
HDAC5-203ENST00000586339 BCL2L12Q9HB09 334 aa18.79■□□□□ 0.6
HDAC5-203ENST00000586339 ARHGAP27Q6ZUM4 889 aa18.78■□□□□ 0.6
HDAC5-203ENST00000586339 ZNF526Q8TF50 670 aaPredicted RBP18.78■□□□□ 0.6
HDAC5-203ENST00000586339 ANKRD31Q8N7Z5 1873 aa18.77■□□□□ 0.6
HDAC5-203ENST00000586339 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-203ENST00000586339 BTBD11A6QL63 1104 aa18.76■□□□□ 0.59
HDAC5-203ENST00000586339 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
HDAC5-203ENST00000586339 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
HDAC5-203ENST00000586339 SERPINB2P05120 415 aa18.75■□□□□ 0.59
HDAC5-203ENST00000586339 CHRNA5P30532 468 aa18.75■□□□□ 0.59
HDAC5-203ENST00000586339 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
HDAC5-203ENST00000586339 CCDC88AQ3V6T2 1871 aa18.74■□□□□ 0.59
HDAC5-203ENST00000586339 KIF3CO14782 793 aa18.74■□□□□ 0.59
HDAC5-203ENST00000586339 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
HDAC5-203ENST00000586339 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
HDAC5-203ENST00000586339 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
HDAC5-203ENST00000586339 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
HDAC5-203ENST00000586339 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
HDAC5-203ENST00000586339 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
HDAC5-203ENST00000586339 COL11A2P13942 1736 aaPredicted RBP18.71■□□□□ 0.59
HDAC5-203ENST00000586339 ARFGEF2Q9Y6D5 1785 aa18.71■□□□□ 0.59
HDAC5-203ENST00000586339 KCNQ3O43525 872 aa18.71■□□□□ 0.59
HDAC5-203ENST00000586339 NEFMP07197 916 aa18.71■□□□□ 0.59
HDAC5-203ENST00000586339 MCM10Q7L590 875 aa18.71■□□□□ 0.59
HDAC5-203ENST00000586339 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
HDAC5-203ENST00000586339 A1BGP04217 495 aa18.7■□□□□ 0.58
HDAC5-203ENST00000586339 SNRPA1P09661 255 aaKnown RBP18.7■□□□□ 0.58
HDAC5-203ENST00000586339 HSPA6P17066 643 aa18.7■□□□□ 0.58
HDAC5-203ENST00000586339 TBC1D9BQ66K14 1250 aa18.7■□□□□ 0.58
HDAC5-203ENST00000586339 TBC1D2BQ9UPU7 963 aa18.7■□□□□ 0.58
HDAC5-203ENST00000586339 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
HDAC5-203ENST00000586339 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
HDAC5-203ENST00000586339 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 TTLL6Q8N841 843 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 FER1L6Q2WGJ9 1857 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 TIAM2Q8IVF5 1701 aa18.69■□□□□ 0.58
HDAC5-203ENST00000586339 H0YIN7 160 aa18.68■□□□□ 0.58
HDAC5-203ENST00000586339 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
HDAC5-203ENST00000586339 BRIP1Q9BX63 1249 aa18.68■□□□□ 0.58
HDAC5-203ENST00000586339 RNF181Q9P0P0 153 aa18.68■□□□□ 0.58
HDAC5-203ENST00000586339 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
HDAC5-203ENST00000586339 RGL2O15211 777 aa18.67■□□□□ 0.58
HDAC5-203ENST00000586339 TOMM70O94826 608 aa18.67■□□□□ 0.58
HDAC5-203ENST00000586339 PDE6BP35913 854 aa18.67■□□□□ 0.58
HDAC5-203ENST00000586339 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
HDAC5-203ENST00000586339 DZIP3Q86Y13 1208 aaKnown RBP18.67■□□□□ 0.58
HDAC5-203ENST00000586339 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
HDAC5-203ENST00000586339 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
HDAC5-203ENST00000586339 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
HDAC5-203ENST00000586339 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
HDAC5-203ENST00000586339 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
HDAC5-203ENST00000586339 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
HDAC5-203ENST00000586339 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
HDAC5-203ENST00000586339 NMRK2Q9NPI5 230 aa18.65■□□□□ 0.58
HDAC5-203ENST00000586339 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
HDAC5-203ENST00000586339 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
HDAC5-203ENST00000586339 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
HDAC5-203ENST00000586339 NUP98P52948 1817 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 LMNB1P20700 586 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 ST5P78524 1137 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 RASSF7Q02833 373 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 SLX4Q8IY92 1834 aa18.63■□□□□ 0.57
HDAC5-203ENST00000586339 NPHP1O15259 732 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms