RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 COL24A1Q17RW2 1714 aa28.55■■■□□ 2.16
R3HDM4-202ENST00000586080 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
R3HDM4-202ENST00000586080 CANXP27824 592 aaKnown RBP28.54■■■□□ 2.16
R3HDM4-202ENST00000586080 TEX13AQ9BXU3 409 aaPredicted RBP28.54■■■□□ 2.16
R3HDM4-202ENST00000586080 SRP68Q9UHB9 627 aaKnown RBP28.54■■■□□ 2.16
R3HDM4-202ENST00000586080 DCAF8L1A6NGE4 600 aa28.53■■■□□ 2.16
R3HDM4-202ENST00000586080 LMOD3Q0VAK6 560 aa28.53■■■□□ 2.16
R3HDM4-202ENST00000586080 PNISRQ8TF01 805 aaKnown RBP28.52■■■□□ 2.16
R3HDM4-202ENST00000586080 MMP10P09238 476 aa28.51■■■□□ 2.15
R3HDM4-202ENST00000586080 GYS1P13807 737 aa28.51■■■□□ 2.15
R3HDM4-202ENST00000586080 CCDC184Q52MB2 194 aa28.51■■■□□ 2.15
R3HDM4-202ENST00000586080 ZNF330Q9Y3S2 320 aaPredicted RBP28.51■■■□□ 2.15
R3HDM4-202ENST00000586080 DLG5Q8TDM6 1919 aa28.51■■■□□ 2.15
R3HDM4-202ENST00000586080 COL15A1P39059 1388 aa28.5■■■□□ 2.15
R3HDM4-202ENST00000586080 USP42Q9H9J4 1324 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-202ENST00000586080 NLGN1Q8N2Q7 840 aa28.5■■■□□ 2.15
R3HDM4-202ENST00000586080 ZPR1O75312 459 aa28.49■■■□□ 2.15
R3HDM4-202ENST00000586080 SNRPA1P09661 255 aaKnown RBP28.49■■■□□ 2.15
R3HDM4-202ENST00000586080 PRAMEF22A3QJZ6 481 aa28.48■■■□□ 2.15
R3HDM4-202ENST00000586080 NLGN2Q8NFZ4 835 aa28.47■■■□□ 2.15
R3HDM4-202ENST00000586080 MRS2Q9HD23 443 aa28.47■■■□□ 2.15
R3HDM4-202ENST00000586080 C4AP0C0L4 1744 aa28.46■■■□□ 2.15
R3HDM4-202ENST00000586080 A1BGP04217 495 aa28.46■■■□□ 2.15
R3HDM4-202ENST00000586080 USPL1Q5W0Q7 1092 aa28.46■■■□□ 2.15
R3HDM4-202ENST00000586080 TSPYL4Q9UJ04 414 aa28.46■■■□□ 2.15
R3HDM4-202ENST00000586080 USP16Q9Y5T5 823 aa28.46■■■□□ 2.15
R3HDM4-202ENST00000586080 FKBP8Q14318 412 aa28.45■■■□□ 2.14
R3HDM4-202ENST00000586080 NPM2Q86SE8 214 aaKnown RBP28.45■■■□□ 2.14
R3HDM4-202ENST00000586080 PIP4K2AP48426 406 aaPredicted RBP28.43■■■□□ 2.14
R3HDM4-202ENST00000586080 EIF5P55010 431 aaKnown RBP28.43■■■□□ 2.14
R3HDM4-202ENST00000586080 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
R3HDM4-202ENST00000586080 PARP3Q9Y6F1 533 aa28.43■■■□□ 2.14
R3HDM4-202ENST00000586080 A0A087WZG4 1122 aa28.42■■■□□ 2.14
R3HDM4-202ENST00000586080 APAF1O14727 1248 aa28.42■■■□□ 2.14
R3HDM4-202ENST00000586080 NARFQ9UHQ1 456 aa28.42■■■□□ 2.14
R3HDM4-202ENST00000586080 CD2APQ9Y5K6 639 aa28.42■■■□□ 2.14
R3HDM4-202ENST00000586080 EIF4A1P60842 406 aaKnown RBP28.41■■■□□ 2.14
R3HDM4-202ENST00000586080 TRIM35Q9UPQ4 493 aa28.41■■■□□ 2.14
R3HDM4-202ENST00000586080 IL6STP40189 918 aaPredicted RBP28.4■■■□□ 2.14
R3HDM4-202ENST00000586080 LAS1LQ9Y4W2 734 aaKnown RBP28.4■■■□□ 2.14
R3HDM4-202ENST00000586080 KDM3BQ7LBC6 1761 aa28.38■■■□□ 2.13
R3HDM4-202ENST00000586080 GPR162Q16538 588 aa28.38■■■□□ 2.13
R3HDM4-202ENST00000586080 TBC1D2BQ9UPU7 963 aa28.38■■■□□ 2.13
R3HDM4-202ENST00000586080 GIGYF1O75420 1035 aaPredicted RBP28.36■■■□□ 2.13
R3HDM4-202ENST00000586080 DDR1Q08345 913 aa28.35■■■□□ 2.13
R3HDM4-202ENST00000586080 BCL2L12Q9HB09 334 aa28.35■■■□□ 2.13
R3HDM4-202ENST00000586080 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
R3HDM4-202ENST00000586080 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
R3HDM4-202ENST00000586080 BICDL1Q6ZP65 573 aa28.33■■■□□ 2.13
R3HDM4-202ENST00000586080 DZIP3Q86Y13 1208 aaKnown RBP28.33■■■□□ 2.13
R3HDM4-202ENST00000586080 NBPF26B4DH59 902 aa28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 POLRMTO00411 1230 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 NFIXQ14938 502 aa28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 NBPF10Q6P3W6 841 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 NBPF15Q8N660 670 aa28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 WWC3Q9ULE0 1092 aa28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 C10orf71Q711Q0 1435 aa28.32■■■□□ 2.12
R3HDM4-202ENST00000586080 TM4SF1P30408 202 aa28.31■■■□□ 2.12
R3HDM4-202ENST00000586080 CHL1O00533 1208 aa28.29■■■□□ 2.12
R3HDM4-202ENST00000586080 CAMTA2O94983 1202 aa28.29■■■□□ 2.12
R3HDM4-202ENST00000586080 NGEFQ8N5V2 710 aa28.29■■■□□ 2.12
R3HDM4-202ENST00000586080 EIF2S2P20042 333 aaKnown RBP28.28■■■□□ 2.12
R3HDM4-202ENST00000586080 LAMB4A4D0S4 1761 aa28.28■■■□□ 2.12
R3HDM4-202ENST00000586080 CALD1Q05682 793 aaKnown RBP28.27■■■□□ 2.12
R3HDM4-202ENST00000586080 TBC1D9BQ66K14 1250 aa28.27■■■□□ 2.12
R3HDM4-202ENST00000586080 SCN7AQ01118 1682 aa28.26■■■□□ 2.12
R3HDM4-202ENST00000586080 MYL6BP14649 208 aa28.26■■■□□ 2.11
R3HDM4-202ENST00000586080 YBX3P16989 372 aaKnown RBP eCLIP28.26■■■□□ 2.11
R3HDM4-202ENST00000586080 CFAP44Q96MT7 982 aa28.26■■■□□ 2.11
R3HDM4-202ENST00000586080 SERPINB2P05120 415 aa28.25■■■□□ 2.11
R3HDM4-202ENST00000586080 KRT24Q2M2I5 525 aa28.25■■■□□ 2.11
R3HDM4-202ENST00000586080 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
R3HDM4-202ENST00000586080 PXDNLA1KZ92 1463 aa28.25■■■□□ 2.11
R3HDM4-202ENST00000586080 TGFB2P61812 414 aa28.24■■■□□ 2.11
R3HDM4-202ENST00000586080 NECTIN2Q92692 538 aa28.24■■■□□ 2.11
R3HDM4-202ENST00000586080 A0A0G2JLW4 131 aa28.23■■■□□ 2.11
R3HDM4-202ENST00000586080 ZNF652Q9Y2D9 606 aa28.23■■■□□ 2.11
R3HDM4-202ENST00000586080 YY1P25490 414 aa28.22■■■□□ 2.11
R3HDM4-202ENST00000586080 MBIPQ9NS73 344 aa28.22■■■□□ 2.11
R3HDM4-202ENST00000586080 IFT57Q9NWB7 429 aa28.22■■■□□ 2.11
R3HDM4-202ENST00000586080 UTRNP46939 3433 aa28.22■■■□□ 2.11
R3HDM4-202ENST00000586080 ERBB4Q15303 1308 aa28.21■■■□□ 2.11
R3HDM4-202ENST00000586080 DPEP1P16444 411 aa28.21■■■□□ 2.11
R3HDM4-202ENST00000586080 GNAI1P63096 354 aa28.21■■■□□ 2.11
R3HDM4-202ENST00000586080 SETDB2Q96T68 719 aa28.21■■■□□ 2.11
R3HDM4-202ENST00000586080 CARMIL3Q8ND23 1372 aa28.21■■■□□ 2.11
R3HDM4-202ENST00000586080 NPHP1O15259 732 aa28.2■■■□□ 2.1
R3HDM4-202ENST00000586080 GRIN3BO60391 1043 aa28.2■■■□□ 2.1
R3HDM4-202ENST00000586080 KIF6Q6ZMV9 814 aa28.2■■■□□ 2.1
R3HDM4-202ENST00000586080 GOLGB1Q14789 3259 aaKnown RBP28.2■■■□□ 2.1
R3HDM4-202ENST00000586080 SALL2Q9Y467 1007 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-202ENST00000586080 CLEC4GQ6UXB4 293 aa28.18■■■□□ 2.1
R3HDM4-202ENST00000586080 BCORQ6W2J9 1755 aa28.17■■■□□ 2.1
R3HDM4-202ENST00000586080 ANXA1P04083 346 aa28.17■■■□□ 2.1
R3HDM4-202ENST00000586080 ZNF853P0CG23 659 aa28.17■■■□□ 2.1
R3HDM4-202ENST00000586080 TTLL7Q6ZT98 887 aa28.17■■■□□ 2.1
R3HDM4-202ENST00000586080 KIF13BQ9NQT8 1826 aa28.17■■■□□ 2.1
R3HDM4-202ENST00000586080 CHRNA5P30532 468 aa28.16■■■□□ 2.1
R3HDM4-202ENST00000586080 BCS1LQ9Y276 419 aa28.16■■■□□ 2.1
R3HDM4-202ENST00000586080 HLFQ16534 295 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms