RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 BCL2L12Q9HB09 334 aa26.62■■□□□ 1.85
PTBP1-208ENST00000585956 SBF1O95248 1867 aa26.61■■□□□ 1.85
PTBP1-208ENST00000585956 NRXN2Q9P2S2 1712 aa26.6■■□□□ 1.85
PTBP1-208ENST00000585956 IFFO2Q5TF58 517 aa26.6■■□□□ 1.85
PTBP1-208ENST00000585956 PIM2Q9P1W9 311 aa26.6■■□□□ 1.85
PTBP1-208ENST00000585956 NFIXQ14938 502 aa26.59■■□□□ 1.85
PTBP1-208ENST00000585956 PRELPP51888 382 aa26.58■■□□□ 1.85
PTBP1-208ENST00000585956 DALRD3Q5D0E6 543 aaKnown RBP26.58■■□□□ 1.85
PTBP1-208ENST00000585956 PCNTO95613 3336 aa26.58■■□□□ 1.85
PTBP1-208ENST00000585956 COL15A1P39059 1388 aa26.58■■□□□ 1.84
PTBP1-208ENST00000585956 CARMIL3Q8ND23 1372 aa26.58■■□□□ 1.84
PTBP1-208ENST00000585956 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
PTBP1-208ENST00000585956 TOMM70O94826 608 aa26.55■■□□□ 1.84
PTBP1-208ENST00000585956 RASSF7Q02833 373 aa26.55■■□□□ 1.84
PTBP1-208ENST00000585956 DLEC1Q9Y238 1755 aa26.54■■□□□ 1.84
PTBP1-208ENST00000585956 DIAPH1O60610 1272 aaKnown RBP26.54■■□□□ 1.84
PTBP1-208ENST00000585956 ZPR1O75312 459 aa26.54■■□□□ 1.84
PTBP1-208ENST00000585956 HTRA3P83110 453 aa26.54■■□□□ 1.84
PTBP1-208ENST00000585956 DNAJC5GQ8N7S2 189 aa26.54■■□□□ 1.84
PTBP1-208ENST00000585956 NARFQ9UHQ1 456 aa26.54■■□□□ 1.84
PTBP1-208ENST00000585956 SIPA1L3O60292 1781 aaPredicted RBP26.53■■□□□ 1.84
PTBP1-208ENST00000585956 RNF181Q9P0P0 153 aa26.53■■□□□ 1.84
PTBP1-208ENST00000585956 CANXP27824 592 aaKnown RBP26.51■■□□□ 1.83
PTBP1-208ENST00000585956 IL17REQ8NFR9 667 aa26.5■■□□□ 1.83
PTBP1-208ENST00000585956 ANKRD31Q8N7Z5 1873 aa26.5■■□□□ 1.83
PTBP1-208ENST00000585956 WDR90Q96KV7 1748 aa26.5■■□□□ 1.83
PTBP1-208ENST00000585956 SERPINB2P05120 415 aa26.48■■□□□ 1.83
PTBP1-208ENST00000585956 APLP1P51693 650 aa26.48■■□□□ 1.83
PTBP1-208ENST00000585956 ZNF496Q96IT1 587 aaPredicted RBP26.48■■□□□ 1.83
PTBP1-208ENST00000585956 VSIG10Q8N0Z9 540 aa26.47■■□□□ 1.83
PTBP1-208ENST00000585956 SCN7AQ01118 1682 aa26.47■■□□□ 1.83
PTBP1-208ENST00000585956 COL11A2P13942 1736 aaPredicted RBP26.46■■□□□ 1.83
PTBP1-208ENST00000585956 EIF5P55010 431 aaKnown RBP26.46■■□□□ 1.83
PTBP1-208ENST00000585956 BICDL1Q6ZP65 573 aa26.46■■□□□ 1.83
PTBP1-208ENST00000585956 CCDC24Q8N4L8 307 aa26.46■■□□□ 1.83
PTBP1-208ENST00000585956 RRAGCQ9HB90 399 aa26.46■■□□□ 1.83
PTBP1-208ENST00000585956 KCNQ3O43525 872 aa26.45■■□□□ 1.82
PTBP1-208ENST00000585956 RBM46Q8TBY0 533 aaKnown RBP26.45■■□□□ 1.82
PTBP1-208ENST00000585956 TNRC6CQ9HCJ0 1690 aaKnown RBP26.44■■□□□ 1.82
PTBP1-208ENST00000585956 U2SURPO15042 1029 aaKnown RBP26.44■■□□□ 1.82
PTBP1-208ENST00000585956 TBC1D9BQ66K14 1250 aa26.44■■□□□ 1.82
PTBP1-208ENST00000585956 CCDC88AQ3V6T2 1871 aa26.44■■□□□ 1.82
PTBP1-208ENST00000585956 PHACTR3Q96KR7 559 aa26.43■■□□□ 1.82
PTBP1-208ENST00000585956 HEG1Q9ULI3 1381 aa26.43■■□□□ 1.82
PTBP1-208ENST00000585956 TIAM2Q8IVF5 1701 aa26.42■■□□□ 1.82
PTBP1-208ENST00000585956 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
PTBP1-208ENST00000585956 NPC1L1Q9UHC9 1359 aa26.42■■□□□ 1.82
PTBP1-208ENST00000585956 NFKBIEO00221 500 aa26.41■■□□□ 1.82
PTBP1-208ENST00000585956 ZNF790Q6PG37 636 aa26.41■■□□□ 1.82
PTBP1-208ENST00000585956 TBC1D2BQ9UPU7 963 aa26.4■■□□□ 1.82
PTBP1-208ENST00000585956 CEMIPQ8WUJ3 1361 aa26.39■■□□□ 1.82
PTBP1-208ENST00000585956 GNAT3A8MTJ3 354 aa26.39■■□□□ 1.82
PTBP1-208ENST00000585956 A1BGP04217 495 aa26.39■■□□□ 1.82
PTBP1-208ENST00000585956 TTC5Q8N0Z6 440 aa26.39■■□□□ 1.82
PTBP1-208ENST00000585956 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.81
PTBP1-208ENST00000585956 PRAMEF22A3QJZ6 481 aa26.38■■□□□ 1.81
PTBP1-208ENST00000585956 PIP4K2AP48426 406 aaPredicted RBP26.38■■□□□ 1.81
PTBP1-208ENST00000585956 TTLL6Q8N841 843 aa26.37■■□□□ 1.81
PTBP1-208ENST00000585956 ZNF330Q9Y3S2 320 aaPredicted RBP26.37■■□□□ 1.81
PTBP1-208ENST00000585956 BCORQ6W2J9 1755 aa26.36■■□□□ 1.81
PTBP1-208ENST00000585956 STARD3NLO95772 234 aa26.36■■□□□ 1.81
PTBP1-208ENST00000585956 TEFQ10587 303 aa26.36■■□□□ 1.81
PTBP1-208ENST00000585956 PRR5LQ6MZQ0 368 aa26.36■■□□□ 1.81
PTBP1-208ENST00000585956 RSPH6AQ9H0K4 717 aa26.36■■□□□ 1.81
PTBP1-208ENST00000585956 LMNB1P20700 586 aa26.35■■□□□ 1.81
PTBP1-208ENST00000585956 PRKAR2BP31323 418 aa26.35■■□□□ 1.81
PTBP1-208ENST00000585956 C16orf71Q8IYS4 520 aaPredicted RBP26.35■■□□□ 1.81
PTBP1-208ENST00000585956 GAS2L2Q8NHY3 880 aa26.35■■□□□ 1.81
PTBP1-208ENST00000585956 CAMTA2O94983 1202 aa26.34■■□□□ 1.81
PTBP1-208ENST00000585956 ZNF219Q9P2Y4 722 aaPredicted RBP26.34■■□□□ 1.81
PTBP1-208ENST00000585956 POTECB2RU33 542 aa26.33■■□□□ 1.81
PTBP1-208ENST00000585956 H0YIN7 160 aa26.33■■□□□ 1.81
PTBP1-208ENST00000585956 FSTL1Q12841 308 aa26.33■■□□□ 1.81
PTBP1-208ENST00000585956 CACNA1SQ13698 1873 aa26.33■■□□□ 1.81
PTBP1-208ENST00000585956 FER1L6Q2WGJ9 1857 aa26.33■■□□□ 1.81
PTBP1-208ENST00000585956 SLX4Q8IY92 1834 aa26.32■■□□□ 1.8
PTBP1-208ENST00000585956 KLRG1Q96E93 195 aa26.32■■□□□ 1.8
PTBP1-208ENST00000585956 USP16Q9Y5T5 823 aa26.32■■□□□ 1.8
PTBP1-208ENST00000585956 GLTPD2A6NH11 291 aa26.31■■□□□ 1.8
PTBP1-208ENST00000585956 IL6STP40189 918 aaPredicted RBP26.31■■□□□ 1.8
PTBP1-208ENST00000585956 A0A087WZG4 1122 aa26.3■■□□□ 1.8
PTBP1-208ENST00000585956 C21orf2O43822 256 aa26.3■■□□□ 1.8
PTBP1-208ENST00000585956 ZNF622Q969S3 477 aaKnown RBP eCLIP26.3■■□□□ 1.81e-20■□□□□ 8.4
PTBP1-208ENST00000585956 FMNL2Q96PY5 1086 aa26.3■■□□□ 1.8
PTBP1-208ENST00000585956 BRIP1Q9BX63 1249 aa26.29■■□□□ 1.8
PTBP1-208ENST00000585956 ZC3H4Q9UPT8 1303 aaKnown RBP26.29■■□□□ 1.8
PTBP1-208ENST00000585956 BTBD11A6QL63 1104 aa26.28■■□□□ 1.8
PTBP1-208ENST00000585956 MCM10Q7L590 875 aa26.28■■□□□ 1.8
PTBP1-208ENST00000585956 DICER1Q9UPY3 1922 aaKnown RBP26.27■■□□□ 1.8
PTBP1-208ENST00000585956 DCTN1Q14203 1278 aa26.27■■□□□ 1.8
PTBP1-208ENST00000585956 JMYQ8N9B5 988 aa26.27■■□□□ 1.8
PTBP1-208ENST00000585956 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
PTBP1-208ENST00000585956 SMC1BQ8NDV3 1235 aa26.25■■□□□ 1.79
PTBP1-208ENST00000585956 PPP2R1AP30153 589 aa26.24■■□□□ 1.79
PTBP1-208ENST00000585956 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
PTBP1-208ENST00000585956 ARFGEF2Q9Y6D5 1785 aa26.24■■□□□ 1.79
PTBP1-208ENST00000585956 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
PTBP1-208ENST00000585956 VEGFAP15692 232 aaPredicted RBP26.23■■□□□ 1.79
PTBP1-208ENST00000585956 PDE6BP35913 854 aa26.23■■□□□ 1.79
PTBP1-208ENST00000585956 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms