RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PHF14O94880 888 aa18.07■□□□□ 0.48
PRKCSH-202ENST00000585540 RFC4P35249 363 aa18.07■□□□□ 0.48
PRKCSH-202ENST00000585540 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 APAF1O14727 1248 aa18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 ARXQ96QS3 562 aa18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-202ENST00000585540 COL15A1P39059 1388 aa18.05■□□□□ 0.48
PRKCSH-202ENST00000585540 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
PRKCSH-202ENST00000585540 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-202ENST00000585540 TRIM35Q9UPQ4 493 aa18.05■□□□□ 0.48
PRKCSH-202ENST00000585540 RGL2O15211 777 aa18.04■□□□□ 0.48
PRKCSH-202ENST00000585540 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-202ENST00000585540 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
PRKCSH-202ENST00000585540 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
PRKCSH-202ENST00000585540 USP42Q9H9J4 1324 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-202ENST00000585540 MIER1Q8N108 512 aa18.03■□□□□ 0.48
PRKCSH-202ENST00000585540 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
PRKCSH-202ENST00000585540 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
PRKCSH-202ENST00000585540 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-202ENST00000585540 CHL1O00533 1208 aa18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 KCNQ3O43525 872 aa18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 HOXB7P09629 217 aa18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
PRKCSH-202ENST00000585540 ZPR1O75312 459 aa18.01■□□□□ 0.47
PRKCSH-202ENST00000585540 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-202ENST00000585540 GNAI1P63096 354 aa18.01■□□□□ 0.47
PRKCSH-202ENST00000585540 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
PRKCSH-202ENST00000585540 IL16Q14005 1332 aa18■□□□□ 0.47
PRKCSH-202ENST00000585540 SCN7AQ01118 1682 aa18■□□□□ 0.47
PRKCSH-202ENST00000585540 GYS1P13807 737 aa18■□□□□ 0.47
PRKCSH-202ENST00000585540 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-202ENST00000585540 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
PRKCSH-202ENST00000585540 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
PRKCSH-202ENST00000585540 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
PRKCSH-202ENST00000585540 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
PRKCSH-202ENST00000585540 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
PRKCSH-202ENST00000585540 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
PRKCSH-202ENST00000585540 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
PRKCSH-202ENST00000585540 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 A1BGP04217 495 aa17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 FHDC1Q9C0D6 1143 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
PRKCSH-202ENST00000585540 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
PRKCSH-202ENST00000585540 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
PRKCSH-202ENST00000585540 WWC1Q8IX03 1113 aa17.95■□□□□ 0.46
PRKCSH-202ENST00000585540 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
PRKCSH-202ENST00000585540 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
PRKCSH-202ENST00000585540 MMP10P09238 476 aa17.94■□□□□ 0.46
PRKCSH-202ENST00000585540 CLEC4GQ6UXB4 293 aa17.94■□□□□ 0.46
PRKCSH-202ENST00000585540 USPL1Q5W0Q7 1092 aa17.93■□□□□ 0.46
PRKCSH-202ENST00000585540 DZIP3Q86Y13 1208 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-202ENST00000585540 LAS1LQ9Y4W2 734 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-202ENST00000585540 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 SRP68Q9UHB9 627 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
PRKCSH-202ENST00000585540 TM4SF1P30408 202 aa17.91■□□□□ 0.46
PRKCSH-202ENST00000585540 FKBP8Q14318 412 aa17.91■□□□□ 0.46
PRKCSH-202ENST00000585540 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
PRKCSH-202ENST00000585540 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
PRKCSH-202ENST00000585540 ZNF330Q9Y3S2 320 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-202ENST00000585540 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
PRKCSH-202ENST00000585540 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 TGFB2P61812 414 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 KIF6Q6ZMV9 814 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 DDX21Q9NR30 783 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
PRKCSH-202ENST00000585540 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-202ENST00000585540 NFIXQ14938 502 aa17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
PRKCSH-202ENST00000585540 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-202ENST00000585540 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
PRKCSH-202ENST00000585540 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
PRKCSH-202ENST00000585540 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
PRKCSH-202ENST00000585540 DDR1Q08345 913 aa17.85■□□□□ 0.45
PRKCSH-202ENST00000585540 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
PRKCSH-202ENST00000585540 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-202ENST00000585540 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 SERPINB2P05120 415 aa17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 PDIA6Q15084 440 aa17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms