RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 NMRK2Q9NPI5 230 aa17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 ZPR1O75312 459 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 WDR90Q96KV7 1748 aa17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-201ENST00000585325 CAPN15O75808 1086 aa17.9■□□□□ 0.46
PRKCSH-201ENST00000585325 HTRA3P83110 453 aa17.9■□□□□ 0.46
PRKCSH-201ENST00000585325 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
PRKCSH-201ENST00000585325 COL15A1P39059 1388 aa17.9■□□□□ 0.46
PRKCSH-201ENST00000585325 DPEP1P16444 411 aa17.89■□□□□ 0.45
PRKCSH-201ENST00000585325 DDR1Q08345 913 aa17.89■□□□□ 0.45
PRKCSH-201ENST00000585325 KLRG1Q96E93 195 aa17.89■□□□□ 0.45
PRKCSH-201ENST00000585325 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-201ENST00000585325 ZNF790Q6PG37 636 aa17.88■□□□□ 0.45
PRKCSH-201ENST00000585325 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
PRKCSH-201ENST00000585325 RBM46Q8TBY0 533 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-201ENST00000585325 ZNF496Q96IT1 587 aaPredicted RBP17.88■□□□□ 0.45
PRKCSH-201ENST00000585325 STARD3NLO95772 234 aa17.87■□□□□ 0.45
PRKCSH-201ENST00000585325 ARHGAP27Q6ZUM4 889 aa17.87■□□□□ 0.45
PRKCSH-201ENST00000585325 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
PRKCSH-201ENST00000585325 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
PRKCSH-201ENST00000585325 POLRMTO00411 1230 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-201ENST00000585325 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
PRKCSH-201ENST00000585325 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-201ENST00000585325 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 FCHSD2O94868 740 aa17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 TM4SF1P30408 202 aa17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
PRKCSH-201ENST00000585325 TNS4Q8IZW8 715 aa17.84■□□□□ 0.45
PRKCSH-201ENST00000585325 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-201ENST00000585325 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-201ENST00000585325 NFIXQ14938 502 aa17.83■□□□□ 0.44
PRKCSH-201ENST00000585325 MCM10Q7L590 875 aa17.83■□□□□ 0.44
PRKCSH-201ENST00000585325 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 A0A087WZG4 1122 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 KCNQ3O43525 872 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 KCNA3P22001 575 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 EIF5P55010 431 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 FSTL1Q12841 308 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 C9orf131Q5VYM1 1079 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 PIM2Q9P1W9 311 aa17.82■□□□□ 0.44
PRKCSH-201ENST00000585325 CHRNA5P30532 468 aa17.81■□□□□ 0.44
PRKCSH-201ENST00000585325 PRELPP51888 382 aa17.81■□□□□ 0.44
PRKCSH-201ENST00000585325 ARFGEF1Q9Y6D6 1849 aa17.81■□□□□ 0.44
PRKCSH-201ENST00000585325 NEFMP07197 916 aa17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 DCTN1Q14203 1278 aa17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
PRKCSH-201ENST00000585325 SERPINB2P05120 415 aa17.79■□□□□ 0.44
PRKCSH-201ENST00000585325 TBC1D2BQ9UPU7 963 aa17.79■□□□□ 0.44
PRKCSH-201ENST00000585325 A1BGP04217 495 aa17.78■□□□□ 0.44
PRKCSH-201ENST00000585325 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-201ENST00000585325 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.44
PRKCSH-201ENST00000585325 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-201ENST00000585325 TBC1D9BQ66K14 1250 aa17.76■□□□□ 0.43
PRKCSH-201ENST00000585325 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
PRKCSH-201ENST00000585325 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
PRKCSH-201ENST00000585325 PRAMEF22A3QJZ6 481 aa17.75■□□□□ 0.43
PRKCSH-201ENST00000585325 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-201ENST00000585325 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-201ENST00000585325 RRAGCQ9HB90 399 aa17.75■□□□□ 0.43
PRKCSH-201ENST00000585325 RNF181Q9P0P0 153 aa17.75■□□□□ 0.43
PRKCSH-201ENST00000585325 DLEC1Q9Y238 1755 aa17.74■□□□□ 0.43
PRKCSH-201ENST00000585325 CARMIL3Q8ND23 1372 aa17.74■□□□□ 0.43
PRKCSH-201ENST00000585325 BCORQ6W2J9 1755 aa17.74■□□□□ 0.43
PRKCSH-201ENST00000585325 TAF7Q15545 349 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-201ENST00000585325 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-201ENST00000585325 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
PRKCSH-201ENST00000585325 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
PRKCSH-201ENST00000585325 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
PRKCSH-201ENST00000585325 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 CAMTA2O94983 1202 aa17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 HSPA1AP0DMV8 641 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 HSPA1BP0DMV9 641 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
PRKCSH-201ENST00000585325 H0YIN7 160 aa17.71■□□□□ 0.43
PRKCSH-201ENST00000585325 NPHP1O15259 732 aa17.71■□□□□ 0.43
PRKCSH-201ENST00000585325 RALBP1Q15311 655 aa17.71■□□□□ 0.43
PRKCSH-201ENST00000585325 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
PRKCSH-201ENST00000585325 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
PRKCSH-201ENST00000585325 ANKRD31Q8N7Z5 1873 aa17.7■□□□□ 0.42
PRKCSH-201ENST00000585325 DDX10Q13206 875 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-201ENST00000585325 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
PRKCSH-201ENST00000585325 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms