RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CEP350Q5VT06 3117 aa20.21■□□□□ 0.83
VAPA-209ENST00000585042 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
VAPA-209ENST00000585042 ARFGEF1Q9Y6D6 1849 aa20.21■□□□□ 0.83
VAPA-209ENST00000585042 STARD3NLO95772 234 aa20.21■□□□□ 0.83
VAPA-209ENST00000585042 GNAT3A8MTJ3 354 aa20.2■□□□□ 0.82
VAPA-209ENST00000585042 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
VAPA-209ENST00000585042 TOMM70O94826 608 aa20.19■□□□□ 0.82
VAPA-209ENST00000585042 TEFQ10587 303 aa20.19■□□□□ 0.82
VAPA-209ENST00000585042 COL15A1P39059 1388 aa20.19■□□□□ 0.82
VAPA-209ENST00000585042 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
VAPA-209ENST00000585042 A0A087WZG4 1122 aa20.18■□□□□ 0.82
VAPA-209ENST00000585042 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
VAPA-209ENST00000585042 NFIXQ14938 502 aa20.18■□□□□ 0.82
VAPA-209ENST00000585042 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
VAPA-209ENST00000585042 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
VAPA-209ENST00000585042 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
VAPA-209ENST00000585042 C9orf131Q5VYM1 1079 aa20.17■□□□□ 0.82
VAPA-209ENST00000585042 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
VAPA-209ENST00000585042 UBR2Q8IWV8 1755 aa20.16■□□□□ 0.82
VAPA-209ENST00000585042 CHRNA5P30532 468 aa20.16■□□□□ 0.82
VAPA-209ENST00000585042 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
VAPA-209ENST00000585042 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
VAPA-209ENST00000585042 SERPINB2P05120 415 aa20.15■□□□□ 0.82
VAPA-209ENST00000585042 NRXN2Q9P2S2 1712 aa20.14■□□□□ 0.81
VAPA-209ENST00000585042 HEG1Q9ULI3 1381 aa20.14■□□□□ 0.81
VAPA-209ENST00000585042 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
VAPA-209ENST00000585042 ZNF496Q96IT1 587 aaPredicted RBP20.14■□□□□ 0.81
VAPA-209ENST00000585042 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
VAPA-209ENST00000585042 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
VAPA-209ENST00000585042 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
VAPA-209ENST00000585042 APLP1P51693 650 aa20.13■□□□□ 0.81
VAPA-209ENST00000585042 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
VAPA-209ENST00000585042 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
VAPA-209ENST00000585042 FMNL2Q96PY5 1086 aa20.12■□□□□ 0.81
VAPA-209ENST00000585042 AFDNP55196 1824 aaKnown RBP20.11■□□□□ 0.81
VAPA-209ENST00000585042 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
VAPA-209ENST00000585042 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
VAPA-209ENST00000585042 NMRK2Q9NPI5 230 aa20.11■□□□□ 0.81
VAPA-209ENST00000585042 RNF181Q9P0P0 153 aa20.11■□□□□ 0.81
VAPA-209ENST00000585042 H0YIN7 160 aa20.1■□□□□ 0.81
VAPA-209ENST00000585042 TTLL6Q8N841 843 aa20.1■□□□□ 0.81
VAPA-209ENST00000585042 RSPH6AQ9H0K4 717 aa20.1■□□□□ 0.81
VAPA-209ENST00000585042 SIPA1L3O60292 1781 aaPredicted RBP20.09■□□□□ 0.81
VAPA-209ENST00000585042 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
VAPA-209ENST00000585042 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
VAPA-209ENST00000585042 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
VAPA-209ENST00000585042 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
VAPA-209ENST00000585042 SBF1O95248 1867 aa20.08■□□□□ 0.81
VAPA-209ENST00000585042 BTBD11A6QL63 1104 aa20.08■□□□□ 0.81
VAPA-209ENST00000585042 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
VAPA-209ENST00000585042 PDE6BP35913 854 aa20.07■□□□□ 0.8
VAPA-209ENST00000585042 FSTL1Q12841 308 aa20.07■□□□□ 0.8
VAPA-209ENST00000585042 C2CD5Q86YS7 1000 aa20.07■□□□□ 0.8
VAPA-209ENST00000585042 BRIP1Q9BX63 1249 aa20.07■□□□□ 0.8
VAPA-209ENST00000585042 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
VAPA-209ENST00000585042 LMNB1P20700 586 aa20.06■□□□□ 0.8
VAPA-209ENST00000585042 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
VAPA-209ENST00000585042 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
VAPA-209ENST00000585042 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
VAPA-209ENST00000585042 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
VAPA-209ENST00000585042 RTF1Q92541 710 aaKnown RBP20.05■□□□□ 0.8
VAPA-209ENST00000585042 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
VAPA-209ENST00000585042 A1BGP04217 495 aa20.04■□□□□ 0.8
VAPA-209ENST00000585042 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
VAPA-209ENST00000585042 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.85e-7■■■■□ 23
VAPA-209ENST00000585042 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
VAPA-209ENST00000585042 SETDB2Q96T68 719 aa20.04■□□□□ 0.8
VAPA-209ENST00000585042 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
VAPA-209ENST00000585042 RGL2O15211 777 aa20.03■□□□□ 0.8
VAPA-209ENST00000585042 IFFO2Q5TF58 517 aa20.03■□□□□ 0.8
VAPA-209ENST00000585042 CLEC4GQ6UXB4 293 aa20.03■□□□□ 0.8
VAPA-209ENST00000585042 RRAGCQ9HB90 399 aa20.03■□□□□ 0.8
VAPA-209ENST00000585042 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
VAPA-209ENST00000585042 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.8
VAPA-209ENST00000585042 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.8
VAPA-209ENST00000585042 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
VAPA-209ENST00000585042 GLTPD2A6NH11 291 aa20.01■□□□□ 0.79
VAPA-209ENST00000585042 KCNQ3O43525 872 aa20.01■□□□□ 0.79
VAPA-209ENST00000585042 ZNF330Q9Y3S2 320 aaPredicted RBP20.01■□□□□ 0.79
VAPA-209ENST00000585042 RASSF7Q02833 373 aa20■□□□□ 0.79
VAPA-209ENST00000585042 DZIP3Q86Y13 1208 aaKnown RBP20■□□□□ 0.79
VAPA-209ENST00000585042 SCN7AQ01118 1682 aa20■□□□□ 0.79
VAPA-209ENST00000585042 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
VAPA-209ENST00000585042 VEGFAP15692 232 aaPredicted RBP19.99■□□□□ 0.79
VAPA-209ENST00000585042 ZNF622Q969S3 477 aaKnown RBP eCLIP19.99■□□□□ 0.79
VAPA-209ENST00000585042 ST5P78524 1137 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
VAPA-209ENST00000585042 STYK1Q6J9G0 422 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 MCM10Q7L590 875 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 SMC1BQ8NDV3 1235 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 CNKSR1Q969H4 720 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 ZNF652Q9Y2D9 606 aa19.98■□□□□ 0.79
VAPA-209ENST00000585042 NFKBIEO00221 500 aa19.97■□□□□ 0.79
VAPA-209ENST00000585042 PRELPP51888 382 aa19.97■□□□□ 0.79
VAPA-209ENST00000585042 DPY19L2Q6NUT2 758 aa19.97■□□□□ 0.79
VAPA-209ENST00000585042 LTBP3Q9NS15 1303 aa19.97■□□□□ 0.79
VAPA-209ENST00000585042 ANKRD31Q8N7Z5 1873 aa19.96■□□□□ 0.79
VAPA-209ENST00000585042 NPHP1O15259 732 aa19.96■□□□□ 0.79
VAPA-209ENST00000585042 NEFMP07197 916 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms