RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ZPR1O75312 459 aa28.49■■■□□ 2.15
PPP4R1-228ENST00000584074 NEFMP07197 916 aa28.49■■■□□ 2.15
PPP4R1-228ENST00000584074 WWC3Q9ULE0 1092 aa28.49■■■□□ 2.15
PPP4R1-228ENST00000584074 COL15A1P39059 1388 aa28.49■■■□□ 2.15
PPP4R1-228ENST00000584074 GRIN3BO60391 1043 aa28.48■■■□□ 2.15
PPP4R1-228ENST00000584074 USPL1Q5W0Q7 1092 aa28.48■■■□□ 2.15
PPP4R1-228ENST00000584074 TEX13AQ9BXU3 409 aaPredicted RBP28.47■■■□□ 2.15
PPP4R1-228ENST00000584074 DDR1Q08345 913 aa28.46■■■□□ 2.15
PPP4R1-228ENST00000584074 NARFQ9UHQ1 456 aa28.46■■■□□ 2.15
PPP4R1-228ENST00000584074 MYBBP1AQ9BQG0 1328 aaKnown RBP28.45■■■□□ 2.15
PPP4R1-228ENST00000584074 C10orf71Q711Q0 1435 aa28.45■■■□□ 2.15
PPP4R1-228ENST00000584074 EIF5P55010 431 aaKnown RBP28.44■■■□□ 2.14
PPP4R1-228ENST00000584074 NFE2L2Q16236 605 aa28.44■■■□□ 2.14
PPP4R1-228ENST00000584074 PXDNLA1KZ92 1463 aa28.43■■■□□ 2.14
PPP4R1-228ENST00000584074 TM4SF1P30408 202 aa28.43■■■□□ 2.14
PPP4R1-228ENST00000584074 PNNQ9H307 717 aaKnown RBP28.43■■■□□ 2.14
PPP4R1-228ENST00000584074 TGFB2P61812 414 aa28.42■■■□□ 2.14
PPP4R1-228ENST00000584074 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
PPP4R1-228ENST00000584074 ZNF784Q8NCA9 323 aaPredicted RBP28.42■■■□□ 2.14
PPP4R1-228ENST00000584074 BCL2L12Q9HB09 334 aa28.42■■■□□ 2.14
PPP4R1-228ENST00000584074 MAPK8IP3Q9UPT6 1336 aa28.42■■■□□ 2.14
PPP4R1-228ENST00000584074 A0A0G2JLW4 131 aa28.41■■■□□ 2.14
PPP4R1-228ENST00000584074 A1BGP04217 495 aa28.41■■■□□ 2.14
PPP4R1-228ENST00000584074 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
PPP4R1-228ENST00000584074 CHD4Q14839 1912 aa28.41■■■□□ 2.14
PPP4R1-228ENST00000584074 PRAMEF22A3QJZ6 481 aa28.4■■■□□ 2.14
PPP4R1-228ENST00000584074 POLRMTO00411 1230 aaKnown RBP28.4■■■□□ 2.14
PPP4R1-228ENST00000584074 ZNF330Q9Y3S2 320 aaPredicted RBP28.4■■■□□ 2.14
PPP4R1-228ENST00000584074 USP16Q9Y5T5 823 aa28.4■■■□□ 2.14
PPP4R1-228ENST00000584074 KIF13BQ9NQT8 1826 aa28.39■■■□□ 2.14
PPP4R1-228ENST00000584074 ZEB1P37275 1124 aaPredicted RBP28.39■■■□□ 2.14
PPP4R1-228ENST00000584074 THUMPD2Q9BTF0 503 aaKnown RBP28.39■■■□□ 2.14
PPP4R1-228ENST00000584074 DPEP1P16444 411 aa28.38■■■□□ 2.13
PPP4R1-228ENST00000584074 NFIXQ14938 502 aa28.38■■■□□ 2.13
PPP4R1-228ENST00000584074 KIAA1551Q9HCM1 1747 aa28.38■■■□□ 2.13
PPP4R1-228ENST00000584074 A0A087WZG4 1122 aa28.37■■■□□ 2.13
PPP4R1-228ENST00000584074 SNRPA1P09661 255 aaKnown RBP28.37■■■□□ 2.13
PPP4R1-228ENST00000584074 IL6STP40189 918 aaPredicted RBP28.37■■■□□ 2.13
PPP4R1-228ENST00000584074 PRKRIP1Q9H875 184 aaPredicted RBP28.35■■■□□ 2.13
PPP4R1-228ENST00000584074 TBC1D2BQ9UPU7 963 aa28.35■■■□□ 2.13
PPP4R1-228ENST00000584074 DLG5Q8TDM6 1919 aa28.34■■■□□ 2.13
PPP4R1-228ENST00000584074 PIP4K2AP48426 406 aaPredicted RBP28.34■■■□□ 2.13
PPP4R1-228ENST00000584074 N4BP2Q86UW6 1770 aaPredicted RBP28.34■■■□□ 2.13
PPP4R1-228ENST00000584074 KCNA3P22001 575 aa28.32■■■□□ 2.12
PPP4R1-228ENST00000584074 BICDL1Q6ZP65 573 aa28.32■■■□□ 2.12
PPP4R1-228ENST00000584074 BCS1LQ9Y276 419 aa28.32■■■□□ 2.12
PPP4R1-228ENST00000584074 RIPK4P57078 832 aa28.31■■■□□ 2.12
PPP4R1-228ENST00000584074 PNISRQ8TF01 805 aaKnown RBP28.31■■■□□ 2.12
PPP4R1-228ENST00000584074 SERPINB2P05120 415 aa28.3■■■□□ 2.12
PPP4R1-228ENST00000584074 NPM2Q86SE8 214 aaKnown RBP28.3■■■□□ 2.12
PPP4R1-228ENST00000584074 CCDC146Q8IYE0 955 aa28.3■■■□□ 2.12
PPP4R1-228ENST00000584074 TMPOP42166 694 aaKnown RBP28.29■■■□□ 2.12
PPP4R1-228ENST00000584074 TBC1D9BQ66K14 1250 aa28.29■■■□□ 2.12
PPP4R1-228ENST00000584074 CAMTA2O94983 1202 aa28.28■■■□□ 2.12
PPP4R1-228ENST00000584074 CHRNA5P30532 468 aa28.28■■■□□ 2.12
PPP4R1-228ENST00000584074 WDR43Q15061 677 aaKnown RBP eCLIP28.28■■■□□ 2.12
PPP4R1-228ENST00000584074 NBPF26B4DH59 902 aa28.27■■■□□ 2.12
PPP4R1-228ENST00000584074 NBPF10Q6P3W6 841 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-228ENST00000584074 DZIP3Q86Y13 1208 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-228ENST00000584074 NBPF15Q8N660 670 aa28.27■■■□□ 2.12
PPP4R1-228ENST00000584074 RRP7AQ9Y3A4 280 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-228ENST00000584074 EIF4A1P60842 406 aaKnown RBP28.26■■■□□ 2.11
PPP4R1-228ENST00000584074 PIM2Q9P1W9 311 aa28.26■■■□□ 2.11
PPP4R1-228ENST00000584074 ADAMTS8Q9UP79 889 aa28.26■■■□□ 2.11
PPP4R1-228ENST00000584074 SCN7AQ01118 1682 aa28.26■■■□□ 2.11
PPP4R1-228ENST00000584074 KDM3BQ7LBC6 1761 aa28.24■■■□□ 2.11
PPP4R1-228ENST00000584074 GIGYF1O75420 1035 aaPredicted RBP28.24■■■□□ 2.11
PPP4R1-228ENST00000584074 NRXN2Q9P2S2 1712 aa28.23■■■□□ 2.11
PPP4R1-228ENST00000584074 AFDNP55196 1824 aaKnown RBP28.23■■■□□ 2.11
PPP4R1-228ENST00000584074 NEUROD2Q15784 382 aa28.23■■■□□ 2.11
PPP4R1-228ENST00000584074 RUNDC1Q96C34 613 aa28.23■■■□□ 2.11
PPP4R1-228ENST00000584074 DALRD3Q5D0E6 543 aaKnown RBP28.22■■■□□ 2.11
PPP4R1-228ENST00000584074 ARHGAP27Q6ZUM4 889 aa28.22■■■□□ 2.11
PPP4R1-228ENST00000584074 CARMIL3Q8ND23 1372 aa28.22■■■□□ 2.11
PPP4R1-228ENST00000584074 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
PPP4R1-228ENST00000584074 TSPYL4Q9UJ04 414 aa28.21■■■□□ 2.11
PPP4R1-228ENST00000584074 SETDB2Q96T68 719 aa28.2■■■□□ 2.1
PPP4R1-228ENST00000584074 BRCA1P38398 1863 aaKnown RBP28.2■■■□□ 2.1
PPP4R1-228ENST00000584074 ATP10DQ9P241 1426 aa28.19■■■□□ 2.1
PPP4R1-228ENST00000584074 CCDC24Q8N4L8 307 aa28.18■■■□□ 2.1
PPP4R1-228ENST00000584074 ADCY9O60503 1353 aa28.18■■■□□ 2.1
PPP4R1-228ENST00000584074 PRR5LQ6MZQ0 368 aa28.17■■■□□ 2.1
PPP4R1-228ENST00000584074 TRIM35Q9UPQ4 493 aa28.17■■■□□ 2.1
PPP4R1-228ENST00000584074 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
PPP4R1-228ENST00000584074 CLEC4GQ6UXB4 293 aa28.16■■■□□ 2.1
PPP4R1-228ENST00000584074 C2CD5Q86YS7 1000 aa28.16■■■□□ 2.1
PPP4R1-228ENST00000584074 BCORQ6W2J9 1755 aa28.16■■■□□ 2.1
PPP4R1-228ENST00000584074 NGEFQ8N5V2 710 aa28.15■■■□□ 2.1
PPP4R1-228ENST00000584074 ZNF652Q9Y2D9 606 aa28.15■■■□□ 2.1
PPP4R1-228ENST00000584074 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
PPP4R1-228ENST00000584074 CNBD1Q8NA66 436 aa28.14■■■□□ 2.1
PPP4R1-228ENST00000584074 BABAM1Q9NWV8 329 aa28.14■■■□□ 2.1
PPP4R1-228ENST00000584074 H0YIN7 160 aa28.13■■■□□ 2.09
PPP4R1-228ENST00000584074 BRIP1Q9BX63 1249 aa28.13■■■□□ 2.09
PPP4R1-228ENST00000584074 NPHP1O15259 732 aa28.12■■■□□ 2.09
PPP4R1-228ENST00000584074 MYL6BP14649 208 aa28.12■■■□□ 2.09
PPP4R1-228ENST00000584074 HLFQ16534 295 aa28.12■■■□□ 2.09
PPP4R1-228ENST00000584074 ZNF526Q8TF50 670 aaPredicted RBP28.12■■■□□ 2.09
PPP4R1-228ENST00000584074 RGL2O15211 777 aa28.1■■■□□ 2.09
PPP4R1-228ENST00000584074 PDE6BP35913 854 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms