RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
LIMD2-211ENST00000583211 SPON1Q9HCB6 807 aa23.81■■□□□ 1.4
LIMD2-211ENST00000583211 ZBTB7AO95365 584 aa23.8■■□□□ 1.4
LIMD2-211ENST00000583211 NGEFQ8N5V2 710 aa23.8■■□□□ 1.4
LIMD2-211ENST00000583211 CHL1O00533 1208 aa23.79■■□□□ 1.4
LIMD2-211ENST00000583211 PHF14O94880 888 aa23.79■■□□□ 1.4
LIMD2-211ENST00000583211 EIF4A1P60842 406 aaKnown RBP23.79■■□□□ 1.4
LIMD2-211ENST00000583211 TRAPPC3LQ5T215 181 aa23.79■■□□□ 1.4
LIMD2-211ENST00000583211 CFAP44Q96MT7 982 aa23.79■■□□□ 1.4
LIMD2-211ENST00000583211 MSH5O43196 834 aa23.78■■□□□ 1.4
LIMD2-211ENST00000583211 MIER1Q8N108 512 aa23.78■■□□□ 1.4
LIMD2-211ENST00000583211 GIGYF1O75420 1035 aaPredicted RBP23.76■■□□□ 1.39
LIMD2-211ENST00000583211 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
LIMD2-211ENST00000583211 IFT57Q9NWB7 429 aa23.76■■□□□ 1.39
LIMD2-211ENST00000583211 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
LIMD2-211ENST00000583211 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
LIMD2-211ENST00000583211 ZNF853P0CG23 659 aa23.75■■□□□ 1.39
LIMD2-211ENST00000583211 GNAI1P63096 354 aa23.75■■□□□ 1.39
LIMD2-211ENST00000583211 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
LIMD2-211ENST00000583211 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
LIMD2-211ENST00000583211 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
LIMD2-211ENST00000583211 ARHGEF1Q92888 912 aaKnown RBP23.74■■□□□ 1.39
LIMD2-211ENST00000583211 ATF5Q9Y2D1 282 aaPredicted RBP23.74■■□□□ 1.39
LIMD2-211ENST00000583211 PRAMEF22A3QJZ6 481 aa23.73■■□□□ 1.39
LIMD2-211ENST00000583211 RFC4P35249 363 aa23.73■■□□□ 1.39
LIMD2-211ENST00000583211 PTGER2P43116 358 aa23.73■■□□□ 1.39
LIMD2-211ENST00000583211 SGIP1Q9BQI5 828 aa23.73■■□□□ 1.39
LIMD2-211ENST00000583211 COL15A1P39059 1388 aa23.73■■□□□ 1.39
LIMD2-211ENST00000583211 IL16Q14005 1332 aa23.71■■□□□ 1.39
LIMD2-211ENST00000583211 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
LIMD2-211ENST00000583211 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
LIMD2-211ENST00000583211 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
LIMD2-211ENST00000583211 SCN7AQ01118 1682 aa23.7■■□□□ 1.39
LIMD2-211ENST00000583211 SENP3-EIF4A1A0A087X0R7 540 aa23.7■■□□□ 1.38
LIMD2-211ENST00000583211 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
LIMD2-211ENST00000583211 BCORQ6W2J9 1755 aa23.7■■□□□ 1.38
LIMD2-211ENST00000583211 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
LIMD2-211ENST00000583211 A0A087WZG4 1122 aa23.69■■□□□ 1.38
LIMD2-211ENST00000583211 A1BGP04217 495 aa23.69■■□□□ 1.38
LIMD2-211ENST00000583211 POLD1P28340 1107 aa23.69■■□□□ 1.38
LIMD2-211ENST00000583211 WDR63Q8IWG1 891 aa23.69■■□□□ 1.38
LIMD2-211ENST00000583211 ERBB4Q15303 1308 aa23.67■■□□□ 1.38
LIMD2-211ENST00000583211 HOXB7P09629 217 aa23.67■■□□□ 1.38
LIMD2-211ENST00000583211 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
LIMD2-211ENST00000583211 ZPR1O75312 459 aa23.66■■□□□ 1.38
LIMD2-211ENST00000583211 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
LIMD2-211ENST00000583211 NLGN1Q8N2Q7 840 aa23.66■■□□□ 1.38
LIMD2-211ENST00000583211 PPP1R1BQ9UD71 204 aaPredicted RBP23.66■■□□□ 1.38
LIMD2-211ENST00000583211 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
LIMD2-211ENST00000583211 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
LIMD2-211ENST00000583211 GYS1P13807 737 aa23.65■■□□□ 1.38
LIMD2-211ENST00000583211 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
LIMD2-211ENST00000583211 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
LIMD2-211ENST00000583211 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
LIMD2-211ENST00000583211 SRCAPQ6ZRS2 3230 aa23.63■■□□□ 1.37
LIMD2-211ENST00000583211 ARXQ96QS3 562 aa23.63■■□□□ 1.37
LIMD2-211ENST00000583211 SRP68Q9UHB9 627 aaKnown RBP23.63■■□□□ 1.37
LIMD2-211ENST00000583211 ZNF330Q9Y3S2 320 aaPredicted RBP23.63■■□□□ 1.37
LIMD2-211ENST00000583211 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
LIMD2-211ENST00000583211 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
LIMD2-211ENST00000583211 PIP4K2AP48426 406 aaPredicted RBP23.61■■□□□ 1.37
LIMD2-211ENST00000583211 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
LIMD2-211ENST00000583211 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
LIMD2-211ENST00000583211 EIF2S2P20042 333 aaKnown RBP23.6■■□□□ 1.37
LIMD2-211ENST00000583211 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
LIMD2-211ENST00000583211 NUP98P52948 1817 aa23.6■■□□□ 1.37
LIMD2-211ENST00000583211 KIF13BQ9NQT8 1826 aa23.59■■□□□ 1.37
LIMD2-211ENST00000583211 TSR2Q969E8 191 aaKnown RBP23.59■■□□□ 1.37
LIMD2-211ENST00000583211 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
LIMD2-211ENST00000583211 RGL2O15211 777 aa23.58■■□□□ 1.37
LIMD2-211ENST00000583211 MMP10P09238 476 aa23.58■■□□□ 1.37
LIMD2-211ENST00000583211 FKBP8Q14318 412 aa23.58■■□□□ 1.37
LIMD2-211ENST00000583211 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.37
LIMD2-211ENST00000583211 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
LIMD2-211ENST00000583211 TBC1D2BQ9UPU7 963 aa23.58■■□□□ 1.37
LIMD2-211ENST00000583211 FANCIQ9NVI1 1328 aa23.58■■□□□ 1.36
LIMD2-211ENST00000583211 HDGFL1Q5TGJ6 251 aa23.57■■□□□ 1.36
LIMD2-211ENST00000583211 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
LIMD2-211ENST00000583211 BCL2L12Q9HB09 334 aa23.57■■□□□ 1.36
LIMD2-211ENST00000583211 NRXN2Q9P2S2 1712 aa23.56■■□□□ 1.36
LIMD2-211ENST00000583211 CAMTA2O94983 1202 aa23.56■■□□□ 1.36
LIMD2-211ENST00000583211 PDIA6Q15084 440 aa23.56■■□□□ 1.36
LIMD2-211ENST00000583211 C8orf58Q8NAV2 365 aa23.56■■□□□ 1.36
LIMD2-211ENST00000583211 MYL6BP14649 208 aa23.55■■□□□ 1.36
LIMD2-211ENST00000583211 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
LIMD2-211ENST00000583211 DDX21Q9NR30 783 aaKnown RBP eCLIP23.55■■□□□ 1.36
LIMD2-211ENST00000583211 TM4SF1P30408 202 aa23.54■■□□□ 1.36
LIMD2-211ENST00000583211 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
LIMD2-211ENST00000583211 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
LIMD2-211ENST00000583211 FHDC1Q9C0D6 1143 aaPredicted RBP23.54■■□□□ 1.36
LIMD2-211ENST00000583211 DBF4Q9UBU7 674 aaPredicted RBP23.54■■□□□ 1.36
LIMD2-211ENST00000583211 ZNF652Q9Y2D9 606 aa23.54■■□□□ 1.36
LIMD2-211ENST00000583211 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
LIMD2-211ENST00000583211 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
LIMD2-211ENST00000583211 NECTIN2Q92692 538 aa23.53■■□□□ 1.36
LIMD2-211ENST00000583211 SPINK5Q9NQ38 1064 aaPredicted RBP23.53■■□□□ 1.36
LIMD2-211ENST00000583211 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
LIMD2-211ENST00000583211 ERVV-1B6SEH8 477 aa23.52■■□□□ 1.36
LIMD2-211ENST00000583211 NFIXQ14938 502 aa23.52■■□□□ 1.36
LIMD2-211ENST00000583211 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms