RNA–Protein interactions for RNA: ENST00000582169.5

EIF4A1-223, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 4

Gene EIF4A1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-223	ENST00000582169	TWISTNB	Q3B726	338 aa	Predicted RBP	13.95	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ZNF428	Q96B54	188 aa		13.95	□□□□□ -0.18
EIF4A1-223	ENST00000582169	CNTNAP4	Q9C0A0	1308 aa		13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	PRAMEF22	A3QJZ6	481 aa		13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	STARD3NL	O95772	234 aa		13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	SNRPA1	P09661	255 aa	Known RBP	13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	KCNQ4	P56696	695 aa		13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	TUBGCP6	Q96RT7	1819 aa		13.94	□□□□□ -0.18
EIF4A1-223	ENST00000582169	CACNA1F	O60840	1977 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ELL2	O00472	640 aa	Predicted RBP	13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ITPK1	Q13572	414 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	SLC15A2	Q16348	729 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	LINC00116	Q8NCU8	138 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	TFCP2L1	Q9NZI6	479 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	USP16	Q9Y5T5	823 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	UBR3	Q6ZT12	1888 aa		13.93	□□□□□ -0.18
EIF4A1-223	ENST00000582169	RARS	P54136	660 aa	Known RBP	13.92	□□□□□ -0.18
EIF4A1-223	ENST00000582169	BRPF1	P55201	1214 aa	Predicted RBP	13.92	□□□□□ -0.18
EIF4A1-223	ENST00000582169	GNPAT	O15228	680 aa		13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ZNF827	Q17R98	1081 aa		13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	RC3H1	Q5TC82	1133 aa	Known RBP	13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	DNAJC10	Q8IXB1	793 aa		13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	FLAD1	Q8NFF5	587 aa		13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	AKT1S1	Q96B36	256 aa		13.91	□□□□□ -0.18
EIF4A1-223	ENST00000582169	SSFA2	P28290	1259 aa		13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	CRKL	P46109	303 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	R3HDM1	Q15032	1099 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	ALDH1L2	Q3SY69	923 aa		13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	SSH1	Q8WYL5	1049 aa		13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	CCDC87	Q9NVE4	849 aa		13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	RCAN3	Q9UKA8	241 aa		13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	RTCB	Q9Y3I0	505 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	MYH14	Q7Z406	1995 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-223	ENST00000582169	CASZ1	Q86V15	1759 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CYP19A1	P11511	503 aa	Predicted RBP	13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	ADRA2B	P18089	450 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	PDIA6	Q15084	440 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	LRP10	Q7Z4F1	713 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	NPM2	Q86SE8	214 aa	Known RBP	13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CHMP4A	Q9BY43	222 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	C4A	P0C0L4	1744 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	RNF123	Q5XPI4	1314 aa		13.89	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CENPB	P07199	599 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-223	ENST00000582169	HDGFL1	Q5TGJ6	251 aa		13.88	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CCDC30	Q5VVM6	783 aa		13.88	□□□□□ -0.19
EIF4A1-223	ENST00000582169	MRPL50	Q8N5N7	158 aa	Known RBP	13.88	□□□□□ -0.19
EIF4A1-223	ENST00000582169	ERBB4	Q15303	1308 aa		13.88	□□□□□ -0.19
EIF4A1-223	ENST00000582169	PSD	A5PKW4	1024 aa	Predicted RBP	13.87	□□□□□ -0.19
EIF4A1-223	ENST00000582169	NBPF26	B4DH59	902 aa		13.87	□□□□□ -0.19
EIF4A1-223	ENST00000582169	NBPF10	Q6P3W6	841 aa	Known RBP	13.87	□□□□□ -0.19
EIF4A1-223	ENST00000582169	NBPF15	Q8N660	670 aa		13.87	□□□□□ -0.19
EIF4A1-223	ENST00000582169	PNPLA7	Q6ZV29	1317 aa		13.87	□□□□□ -0.19
EIF4A1-223	ENST00000582169	COL15A1	P39059	1388 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	RPS6KA4	O75676	772 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	BCAR3	O75815	825 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	PHF14	O94880	888 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	A1BG	P04217	495 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	EIF2S2	P20042	333 aa	Known RBP	13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	INTS5	Q6P9B9	1019 aa	Known RBP	13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.86	□□□□□ -0.19	5e-7	■□□□□ 10.1
EIF4A1-223	ENST00000582169	ZBTB1	Q9Y2K1	713 aa		13.86	□□□□□ -0.19
EIF4A1-223	ENST00000582169	TCERG1	O14776	1098 aa	Known RBP	13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	MSH5	O43196	834 aa		13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	IL6ST	P40189	918 aa	Predicted RBP	13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	PROSER3	Q2NL68	480 aa		13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	TRAPPC3L	Q5T215	181 aa		13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CHPF2	Q9P2E5	772 aa		13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	DBF4	Q9UBU7	674 aa	Predicted RBP	13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169	SCN7A	Q01118	1682 aa		13.85	□□□□□ -0.19
EIF4A1-223	ENST00000582169		A0A087WZG4	1122 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	SLC4A2	P04920	1241 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	CANX	P27824	592 aa	Known RBP	13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	RFC4	P35249	363 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	G2E3	Q7L622	706 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	SLC16A10	Q8TF71	515 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	NECTIN2	Q92692	538 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	BCL2L13	Q9BXK5	485 aa		13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.84	□□□□□ -0.19
EIF4A1-223	ENST00000582169	SMC4	Q9NTJ3	1288 aa		13.83	□□□□□ -0.2
EIF4A1-223	ENST00000582169	HYPK	Q9NX55	129 aa		13.83	□□□□□ -0.2
EIF4A1-223	ENST00000582169	BCOR	Q6W2J9	1755 aa		13.83	□□□□□ -0.2
EIF4A1-223	ENST00000582169	ANXA1	P04083	346 aa		13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	EIF5	P55010	431 aa	Known RBP	13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	COL23A1	Q86Y22	540 aa	Predicted RBP	13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	ARHGAP45	Q92619	1136 aa		13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	STK31	Q9BXU1	1019 aa		13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	MTFR1L	Q9H019	292 aa		13.82	□□□□□ -0.2
EIF4A1-223	ENST00000582169	ZPR1	O75312	459 aa		13.81	□□□□□ -0.2
EIF4A1-223	ENST00000582169	PIP4K2A	P48426	406 aa	Predicted RBP	13.81	□□□□□ -0.2
EIF4A1-223	ENST00000582169	PHAX	Q9H814	394 aa	Known RBP	13.81	□□□□□ -0.2
EIF4A1-223	ENST00000582169	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.81	□□□□□ -0.2
EIF4A1-223	ENST00000582169	LRP5	O75197	1615 aa		13.81	□□□□□ -0.2
EIF4A1-223	ENST00000582169	FLII	Q13045	1269 aa		13.8	□□□□□ -0.2
EIF4A1-223	ENST00000582169	AMIGO3	Q86WK7	504 aa		13.8	□□□□□ -0.2
EIF4A1-223	ENST00000582169	ARHGEF1	Q92888	912 aa	Known RBP	13.8	□□□□□ -0.2
EIF4A1-223	ENST00000582169	NOB1	Q9ULX3	412 aa	Known RBP	13.8	□□□□□ -0.2
EIF4A1-223	ENST00000582169	PTPRC	P08575	1304 aa		13.8	□□□□□ -0.2
EIF4A1-223	ENST00000582169	KIF16B	Q96L93	1317 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms