RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GTF2IP78347 998 aa9.06□□□□□ -0.96
SMCHD1-205ENST00000581383 ABHD17AQ96GS6 310 aa9.06□□□□□ -0.96
SMCHD1-205ENST00000581383 CHIC2Q9UKJ5 165 aa9.06□□□□□ -0.96
SMCHD1-205ENST00000581383 ATXN7L1Q9ULK2 861 aaPredicted RBP9.06□□□□□ -0.96
SMCHD1-205ENST00000581383 RBM19Q9Y4C8 960 aaKnown RBP9.06□□□□□ -0.96
SMCHD1-205ENST00000581383 LZTS3O60299 673 aaPredicted RBP9.05□□□□□ -0.96
SMCHD1-205ENST00000581383 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
SMCHD1-205ENST00000581383 GALNT6Q8NCL4 622 aa9.05□□□□□ -0.96
SMCHD1-205ENST00000581383 NEUROD4Q9HD90 331 aa9.05□□□□□ -0.96
SMCHD1-205ENST00000581383 A6NJY4 79 aa9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 FGFR3P22607 806 aa9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 NCOA4Q13772 614 aa9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 C1orf216Q8TAB5 229 aa9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 GDF2Q9UK05 429 aaPredicted RBP9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 CNTNAP5Q8WYK1 1306 aa9.04□□□□□ -0.96
SMCHD1-205ENST00000581383 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
SMCHD1-205ENST00000581383 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
SMCHD1-205ENST00000581383 KLRG1Q96E93 195 aa9.03□□□□□ -0.96
SMCHD1-205ENST00000581383 ARXQ96QS3 562 aa9.03□□□□□ -0.96
SMCHD1-205ENST00000581383 ZNF232Q9UNY5 417 aa9.03□□□□□ -0.96
SMCHD1-205ENST00000581383 ATXN7O15265 892 aaPredicted RBP9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 OIP5O43482 229 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 GOLGA6L1Q8N7Z2 621 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 CRISPLD1Q9H336 500 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 ALG2Q9H553 416 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 PCDHGC4Q9Y5F7 938 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
SMCHD1-205ENST00000581383 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 TMEM229AB2RXF0 380 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 CDK2AP1O14519 115 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 MSTNO14793 375 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
SMCHD1-205ENST00000581383 A0A1W2PNR3 127 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 DCDC2BA2VCK2 349 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 BNIP3LO60238 219 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 ATP1A2P50993 1020 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 NLRP8Q86W28 1048 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 EDARADDQ8WWZ3 215 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 LRRC4BQ9NT99 713 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
SMCHD1-205ENST00000581383 MKL2Q9ULH7 1088 aa8.99□□□□□ -0.97
SMCHD1-205ENST00000581383 THBS1P07996 1170 aa8.98□□□□□ -0.97
SMCHD1-205ENST00000581383 CTBSQ01459 385 aa8.98□□□□□ -0.97
SMCHD1-205ENST00000581383 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
SMCHD1-205ENST00000581383 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
SMCHD1-205ENST00000581383 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
SMCHD1-205ENST00000581383 HOMEZQ8IX15 550 aa8.97□□□□□ -0.97
SMCHD1-205ENST00000581383 TPCN2Q8NHX9 752 aa8.97□□□□□ -0.97
SMCHD1-205ENST00000581383 CALR3Q96L12 384 aaKnown RBP8.97□□□□□ -0.97
SMCHD1-205ENST00000581383 ZDHHC3Q9NYG2 299 aa8.97□□□□□ -0.97
SMCHD1-205ENST00000581383 PIK3R2O00459 728 aa8.96□□□□□ -0.98
SMCHD1-205ENST00000581383 ATP4AP20648 1035 aa8.96□□□□□ -0.98
SMCHD1-205ENST00000581383 TBCELQ5QJ74 424 aa8.96□□□□□ -0.98
SMCHD1-205ENST00000581383 Q8N3U1 123 aa8.96□□□□□ -0.98
SMCHD1-205ENST00000581383 CCDC97Q96F63 343 aaPredicted RBP8.96□□□□□ -0.98
SMCHD1-205ENST00000581383 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 NEURL1BA8MQ27 555 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 CD33P20138 364 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 MTFR1Q15390 333 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 CCDC102BQ68D86 513 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 GLMNQ92990 594 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 SPOCK3Q9BQ16 436 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 DNAAF2Q9NVR5 837 aaKnown RBP8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 SERPINA10Q9UK55 444 aa8.95□□□□□ -0.98
SMCHD1-205ENST00000581383 SHISA8B8ZZ34 492 aa8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 PLA2G4EQ3MJ16 856 aa8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 SLC9A9Q8IVB4 645 aa8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 SCHIP1Q9P0W5 487 aaPredicted RBP8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 MKRN1Q9UHC7 482 aaKnown RBP8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 USP3Q9Y6I4 520 aa8.94□□□□□ -0.98
SMCHD1-205ENST00000581383 SERTM1A2A2V5 107 aa8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 ATP9BO43861 1147 aa8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 NOS2P35228 1153 aa8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 UBAP2LQ14157 1087 aaKnown RBP8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 ZIC5Q96T25 663 aa8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 IQSEC3Q9UPP2 1182 aaPredicted RBP8.93□□□□□ -0.98
SMCHD1-205ENST00000581383 C2CD2LO14523 706 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 ARAFP10398 606 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 ADH6P28332 368 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 GRIN2CQ14957 1233 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 LRRC69Q6ZNQ3 347 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 SLCO4C1Q6ZQN7 724 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 RHPN1Q8TCX5 695 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 ADAMTS19Q8TE59 1207 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms