RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
NUP85-215ENST00000580879 RFC4P35249 363 aa17.47■□□□□ 0.39
NUP85-215ENST00000580879 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
NUP85-215ENST00000580879 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
NUP85-215ENST00000580879 STARD3NLO95772 234 aa17.46■□□□□ 0.39
NUP85-215ENST00000580879 COL24A1Q17RW2 1714 aa17.46■□□□□ 0.39
NUP85-215ENST00000580879 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
NUP85-215ENST00000580879 SYT17Q9BSW7 474 aa17.45■□□□□ 0.38
NUP85-215ENST00000580879 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
NUP85-215ENST00000580879 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
NUP85-215ENST00000580879 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
NUP85-215ENST00000580879 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
NUP85-215ENST00000580879 APAF1O14727 1248 aa17.43■□□□□ 0.38
NUP85-215ENST00000580879 A1BGP04217 495 aa17.43■□□□□ 0.38
NUP85-215ENST00000580879 GYS1P13807 737 aa17.43■□□□□ 0.38
NUP85-215ENST00000580879 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
NUP85-215ENST00000580879 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
NUP85-215ENST00000580879 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
NUP85-215ENST00000580879 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
NUP85-215ENST00000580879 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
NUP85-215ENST00000580879 COL15A1P39059 1388 aa17.42■□□□□ 0.38
NUP85-215ENST00000580879 MMP10P09238 476 aa17.42■□□□□ 0.38
NUP85-215ENST00000580879 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
NUP85-215ENST00000580879 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
NUP85-215ENST00000580879 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
NUP85-215ENST00000580879 ZPR1O75312 459 aa17.4■□□□□ 0.38
NUP85-215ENST00000580879 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
NUP85-215ENST00000580879 FKBP8Q14318 412 aa17.4■□□□□ 0.38
NUP85-215ENST00000580879 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
NUP85-215ENST00000580879 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
NUP85-215ENST00000580879 NLGN2Q8NFZ4 835 aa17.4■□□□□ 0.38
NUP85-215ENST00000580879 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
NUP85-215ENST00000580879 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
NUP85-215ENST00000580879 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
NUP85-215ENST00000580879 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
NUP85-215ENST00000580879 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
NUP85-215ENST00000580879 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
NUP85-215ENST00000580879 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
NUP85-215ENST00000580879 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
NUP85-215ENST00000580879 A0A087WZG4 1122 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 DDR1Q08345 913 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
NUP85-215ENST00000580879 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
NUP85-215ENST00000580879 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 PARP3Q9Y6F1 533 aa17.35■□□□□ 0.37
NUP85-215ENST00000580879 CHL1O00533 1208 aa17.34■□□□□ 0.37
NUP85-215ENST00000580879 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
NUP85-215ENST00000580879 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
NUP85-215ENST00000580879 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
NUP85-215ENST00000580879 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
NUP85-215ENST00000580879 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
NUP85-215ENST00000580879 NFIXQ14938 502 aa17.33■□□□□ 0.36
NUP85-215ENST00000580879 BICDL1Q6ZP65 573 aa17.33■□□□□ 0.36
NUP85-215ENST00000580879 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.36
NUP85-215ENST00000580879 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
NUP85-215ENST00000580879 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
NUP85-215ENST00000580879 TM4SF1P30408 202 aa17.32■□□□□ 0.36
NUP85-215ENST00000580879 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
NUP85-215ENST00000580879 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
NUP85-215ENST00000580879 LAMB4A4D0S4 1761 aa17.31■□□□□ 0.36
NUP85-215ENST00000580879 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
NUP85-215ENST00000580879 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
NUP85-215ENST00000580879 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
NUP85-215ENST00000580879 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
NUP85-215ENST00000580879 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
NUP85-215ENST00000580879 MYL6BP14649 208 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 GPR162Q16538 588 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 UTRNP46939 3433 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
NUP85-215ENST00000580879 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
NUP85-215ENST00000580879 ANXA1P04083 346 aa17.28■□□□□ 0.36
NUP85-215ENST00000580879 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
NUP85-215ENST00000580879 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
NUP85-215ENST00000580879 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
NUP85-215ENST00000580879 SERPINB2P05120 415 aa17.27■□□□□ 0.36
NUP85-215ENST00000580879 YBX3P16989 372 aaKnown RBP eCLIP17.27■□□□□ 0.36
NUP85-215ENST00000580879 GNAI1P63096 354 aa17.27■□□□□ 0.36
NUP85-215ENST00000580879 PROSER3Q2NL68 480 aa17.27■□□□□ 0.36
NUP85-215ENST00000580879 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
NUP85-215ENST00000580879 PXDNLA1KZ92 1463 aa17.26■□□□□ 0.35
NUP85-215ENST00000580879 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
NUP85-215ENST00000580879 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
NUP85-215ENST00000580879 DPEP1P16444 411 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 PDIA6Q15084 440 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 HLFQ16534 295 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
NUP85-215ENST00000580879 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
NUP85-215ENST00000580879 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
NUP85-215ENST00000580879 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
NUP85-215ENST00000580879 TGFB2P61812 414 aa17.24■□□□□ 0.35
NUP85-215ENST00000580879 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
NUP85-215ENST00000580879 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
NUP85-215ENST00000580879 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
NUP85-215ENST00000580879 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms