RNA–Protein interactions for RNA: ENST00000580539.2

RN7SL716P-201, Transcript of RNA, 7SL, cytoplasmic 716, pseudogene, humanhuman

BASIC

Gene RN7SL716P, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL716P-201ENST00000580539 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
RN7SL716P-201ENST00000580539 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
RN7SL716P-201ENST00000580539 APLP1P51693 650 aa13.3□□□□□ -0.28
RN7SL716P-201ENST00000580539 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
RN7SL716P-201ENST00000580539 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
RN7SL716P-201ENST00000580539 NFATC2IPQ8NCF5 419 aa13.3□□□□□ -0.28
RN7SL716P-201ENST00000580539 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
RN7SL716P-201ENST00000580539 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 CHRNA5P30532 468 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 MTHFSP49914 203 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
RN7SL716P-201ENST00000580539 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 FKBP8Q14318 412 aa13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 PIM2Q9P1W9 311 aa13.28□□□□□ -0.28
RN7SL716P-201ENST00000580539 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
RN7SL716P-201ENST00000580539 PANK3Q9H999 370 aa13.27□□□□□ -0.29
RN7SL716P-201ENST00000580539 ITGB4P16144 1822 aa13.27□□□□□ -0.29
RN7SL716P-201ENST00000580539 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
RN7SL716P-201ENST00000580539 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 DDR1Q08345 913 aa13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 RNF181Q9P0P0 153 aa13.25□□□□□ -0.29
RN7SL716P-201ENST00000580539 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 NCAPD2Q15021 1401 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
RN7SL716P-201ENST00000580539 KDRP35968 1356 aa13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 MAP2P11137 1827 aaKnown RBP13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 TIE1P35590 1138 aa13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 DNAJC10Q8IXB1 793 aa13.23□□□□□ -0.29
RN7SL716P-201ENST00000580539 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
RN7SL716P-201ENST00000580539 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
RN7SL716P-201ENST00000580539 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
RN7SL716P-201ENST00000580539 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
RN7SL716P-201ENST00000580539 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
RN7SL716P-201ENST00000580539 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 ZPR1O75312 459 aa13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 TM4SF1P30408 202 aa13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 NUBP1P53384 320 aa13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 RASSF7Q02833 373 aa13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
RN7SL716P-201ENST00000580539 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.3
RN7SL716P-201ENST00000580539 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 POLRMTO00411 1230 aaKnown RBP13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
RN7SL716P-201ENST00000580539 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
RN7SL716P-201ENST00000580539 HMOX1P09601 288 aa13.19□□□□□ -0.3
RN7SL716P-201ENST00000580539 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
RN7SL716P-201ENST00000580539 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
RN7SL716P-201ENST00000580539 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 SEC24BO95487 1268 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 IL13P35225 146 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 PRELPP51888 382 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 NFIXQ14938 502 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
RN7SL716P-201ENST00000580539 FSTL1Q12841 308 aa13.17□□□□□ -0.3
RN7SL716P-201ENST00000580539 SERPINB2P05120 415 aa13.16□□□□□ -0.3
RN7SL716P-201ENST00000580539 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
RN7SL716P-201ENST00000580539 EIF4G2P78344 907 aaKnown RBP eCLIP13.16□□□□□ -0.3
RN7SL716P-201ENST00000580539 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
RN7SL716P-201ENST00000580539 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
RN7SL716P-201ENST00000580539 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
RN7SL716P-201ENST00000580539 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 LCE2DQ5TA82 110 aaPredicted RBP13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
RN7SL716P-201ENST00000580539 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms