RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 RFC4P35249 363 aa24.5■■□□□ 1.51
NEK4P2-201ENST00000580004 NCBP3Q53F19 620 aaKnown RBP24.5■■□□□ 1.51
NEK4P2-201ENST00000580004 ARHGEF1Q92888 912 aaKnown RBP24.5■■□□□ 1.51
NEK4P2-201ENST00000580004 TRIM35Q9UPQ4 493 aa24.5■■□□□ 1.51
NEK4P2-201ENST00000580004 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
NEK4P2-201ENST00000580004 THUMPD2Q9BTF0 503 aaKnown RBP24.49■■□□□ 1.51
NEK4P2-201ENST00000580004 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
NEK4P2-201ENST00000580004 NEUROD2Q15784 382 aa24.48■■□□□ 1.51
NEK4P2-201ENST00000580004 NLGN1Q8N2Q7 840 aa24.48■■□□□ 1.51
NEK4P2-201ENST00000580004 APAF1O14727 1248 aa24.47■■□□□ 1.51
NEK4P2-201ENST00000580004 CALD1Q05682 793 aaKnown RBP24.47■■□□□ 1.51
NEK4P2-201ENST00000580004 ZBTB1Q9Y2K1 713 aa24.47■■□□□ 1.51
NEK4P2-201ENST00000580004 COL15A1P39059 1388 aa24.46■■□□□ 1.51
NEK4P2-201ENST00000580004 USP42Q9H9J4 1324 aaKnown RBP24.45■■□□□ 1.5
NEK4P2-201ENST00000580004 IL6STP40189 918 aaPredicted RBP24.45■■□□□ 1.5
NEK4P2-201ENST00000580004 EIF4A1P60842 406 aaKnown RBP24.45■■□□□ 1.5
NEK4P2-201ENST00000580004 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.5
NEK4P2-201ENST00000580004 TSPYL4Q9UJ04 414 aa24.45■■□□□ 1.5
NEK4P2-201ENST00000580004 A0A087WZG4 1122 aa24.44■■□□□ 1.5
NEK4P2-201ENST00000580004 EIF5P55010 431 aaKnown RBP24.44■■□□□ 1.5
NEK4P2-201ENST00000580004 SMIM5Q71RC9 77 aa24.44■■□□□ 1.5
NEK4P2-201ENST00000580004 CHL1O00533 1208 aa24.43■■□□□ 1.5
NEK4P2-201ENST00000580004 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
NEK4P2-201ENST00000580004 GIGYF1O75420 1035 aaPredicted RBP24.42■■□□□ 1.5
NEK4P2-201ENST00000580004 GYS1P13807 737 aa24.42■■□□□ 1.5
NEK4P2-201ENST00000580004 MSL1Q68DK7 614 aa24.42■■□□□ 1.5
NEK4P2-201ENST00000580004 NARFQ9UHQ1 456 aa24.42■■□□□ 1.5
NEK4P2-201ENST00000580004 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
NEK4P2-201ENST00000580004 ZPR1O75312 459 aa24.41■■□□□ 1.5
NEK4P2-201ENST00000580004 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
NEK4P2-201ENST00000580004 CFAP44Q96MT7 982 aa24.41■■□□□ 1.5
NEK4P2-201ENST00000580004 FHDC1Q9C0D6 1143 aaPredicted RBP24.41■■□□□ 1.5
NEK4P2-201ENST00000580004 NPM2Q86SE8 214 aaKnown RBP24.4■■□□□ 1.5
NEK4P2-201ENST00000580004 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
NEK4P2-201ENST00000580004 SYT17Q9BSW7 474 aa24.39■■□□□ 1.49
NEK4P2-201ENST00000580004 SCN7AQ01118 1682 aa24.39■■□□□ 1.49
NEK4P2-201ENST00000580004 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
NEK4P2-201ENST00000580004 CCER2I3L3R5 266 aa24.38■■□□□ 1.49
NEK4P2-201ENST00000580004 A1BGP04217 495 aa24.38■■□□□ 1.49
NEK4P2-201ENST00000580004 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
NEK4P2-201ENST00000580004 GNAI1P63096 354 aa24.37■■□□□ 1.49
NEK4P2-201ENST00000580004 IFT57Q9NWB7 429 aa24.37■■□□□ 1.49
NEK4P2-201ENST00000580004 CD2APQ9Y5K6 639 aa24.37■■□□□ 1.49
NEK4P2-201ENST00000580004 KIF13BQ9NQT8 1826 aa24.36■■□□□ 1.49
NEK4P2-201ENST00000580004 RGL2O15211 777 aa24.36■■□□□ 1.49
NEK4P2-201ENST00000580004 MMP10P09238 476 aa24.36■■□□□ 1.49
NEK4P2-201ENST00000580004 BCORQ6W2J9 1755 aa24.36■■□□□ 1.49
NEK4P2-201ENST00000580004 HOXB7P09629 217 aa24.35■■□□□ 1.49
NEK4P2-201ENST00000580004 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
NEK4P2-201ENST00000580004 SRP68Q9UHB9 627 aaKnown RBP24.35■■□□□ 1.49
NEK4P2-201ENST00000580004 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
NEK4P2-201ENST00000580004 FKBP8Q14318 412 aa24.33■■□□□ 1.49
NEK4P2-201ENST00000580004 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.49
NEK4P2-201ENST00000580004 PARP3Q9Y6F1 533 aa24.33■■□□□ 1.49
NEK4P2-201ENST00000580004 WWC1Q8IX03 1113 aa24.32■■□□□ 1.48
NEK4P2-201ENST00000580004 LAS1LQ9Y4W2 734 aaKnown RBP24.32■■□□□ 1.48
NEK4P2-201ENST00000580004 IL16Q14005 1332 aa24.32■■□□□ 1.48
NEK4P2-201ENST00000580004 DCAF8L1A6NGE4 600 aa24.31■■□□□ 1.48
NEK4P2-201ENST00000580004 NBPF26B4DH59 902 aa24.31■■□□□ 1.48
NEK4P2-201ENST00000580004 TM4SF1P30408 202 aa24.31■■□□□ 1.48
NEK4P2-201ENST00000580004 NBPF10Q6P3W6 841 aaKnown RBP24.31■■□□□ 1.48
NEK4P2-201ENST00000580004 NBPF15Q8N660 670 aa24.31■■□□□ 1.48
NEK4P2-201ENST00000580004 NRXN2Q9P2S2 1712 aa24.3■■□□□ 1.48
NEK4P2-201ENST00000580004 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
NEK4P2-201ENST00000580004 BCL2L12Q9HB09 334 aa24.3■■□□□ 1.48
NEK4P2-201ENST00000580004 MBIPQ9NS73 344 aa24.3■■□□□ 1.48
NEK4P2-201ENST00000580004 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
NEK4P2-201ENST00000580004 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
NEK4P2-201ENST00000580004 CLEC4GQ6UXB4 293 aa24.29■■□□□ 1.48
NEK4P2-201ENST00000580004 C10orf71Q711Q0 1435 aa24.28■■□□□ 1.48
NEK4P2-201ENST00000580004 CHMP4AQ9BY43 222 aa24.28■■□□□ 1.48
NEK4P2-201ENST00000580004 TBC1D2BQ9UPU7 963 aa24.28■■□□□ 1.48
NEK4P2-201ENST00000580004 ZNF652Q9Y2D9 606 aa24.28■■□□□ 1.48
NEK4P2-201ENST00000580004 AFDNP55196 1824 aaKnown RBP24.27■■□□□ 1.48
NEK4P2-201ENST00000580004 CAMTA2O94983 1202 aa24.27■■□□□ 1.48
NEK4P2-201ENST00000580004 WDR63Q8IWG1 891 aa24.27■■□□□ 1.48
NEK4P2-201ENST00000580004 KLHL34Q8N239 644 aa24.27■■□□□ 1.48
NEK4P2-201ENST00000580004 POLRMTO00411 1230 aaKnown RBP24.26■■□□□ 1.47
NEK4P2-201ENST00000580004 NFIXQ14938 502 aa24.26■■□□□ 1.47
NEK4P2-201ENST00000580004 DDR1Q08345 913 aa24.25■■□□□ 1.47
NEK4P2-201ENST00000580004 PIP4K2AP48426 406 aaPredicted RBP24.24■■□□□ 1.47
NEK4P2-201ENST00000580004 TGFB2P61812 414 aa24.24■■□□□ 1.47
NEK4P2-201ENST00000580004 ERVV-1B6SEH8 477 aa24.23■■□□□ 1.47
NEK4P2-201ENST00000580004 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
NEK4P2-201ENST00000580004 KIAA1551Q9HCM1 1747 aa24.23■■□□□ 1.47
NEK4P2-201ENST00000580004 NUP98P52948 1817 aa24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 EIF2S2P20042 333 aaKnown RBP24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 PDIA6Q15084 440 aa24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 DUSP27Q5VZP5 1158 aa24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 NLGN2Q8NFZ4 835 aa24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 GOLGB1Q14789 3259 aaKnown RBP24.22■■□□□ 1.47
NEK4P2-201ENST00000580004 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
NEK4P2-201ENST00000580004 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
NEK4P2-201ENST00000580004 DDX21Q9NR30 783 aaKnown RBP eCLIP24.21■■□□□ 1.47
NEK4P2-201ENST00000580004 MAP3K15Q6ZN16 1313 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 UTRNP46939 3433 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 MYL6BP14649 208 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 HDGFL1Q5TGJ6 251 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 TBC1D9BQ66K14 1250 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms