RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 SPG7Q9UQ90 795 aa11□□□□□ -0.65
PPP4R1-213ENST00000579609 CDC45O75419 566 aa10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 FKBP5Q13451 457 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 KRT24Q2M2I5 525 aa10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 SNX21Q969T3 373 aa10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-213ENST00000579609 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 ALDH1L1O75891 902 aa10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 MEIS3Q99687 375 aa10.98□□□□□ -0.65
PPP4R1-213ENST00000579609 RAB11FIP3O75154 756 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 SEC24BO95487 1268 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 PYGBP11216 843 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 HSP90AB4PQ58FF6 505 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 TTC22Q5TAA0 569 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 CASC1Q6TDU7 716 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
PPP4R1-213ENST00000579609 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 MTX1Q13505 466 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 G2E3Q7L622 706 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 MIS18AQ9NYP9 233 aa10.96□□□□□ -0.65
PPP4R1-213ENST00000579609 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 COL15A1P39059 1388 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 SSH3Q8TE77 659 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 DNAAF4Q8WXU2 420 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
PPP4R1-213ENST00000579609 SALL3Q9BXA9 1300 aa10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 STAP2Q9UGK3 403 aa10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 MEGF6O75095 1541 aa10.94□□□□□ -0.66
PPP4R1-213ENST00000579609 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 UTYO14607 1347 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 C5P01031 1676 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 PHKG2P15735 406 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 SLC4A10Q6U841 1118 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 BRINP3Q76B58 766 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 LRRCC1Q9C099 1032 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 USP44Q9H0E7 712 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 DDX21Q9NR30 783 aaKnown RBP eCLIP10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 COL22A1Q8NFW1 1626 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-213ENST00000579609 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 GLI3P10071 1580 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 REC8O95072 547 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 MFAP1P55081 439 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 KSR2Q6VAB6 950 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 HSCBQ8IWL3 235 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 COL5A2P05997 1499 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-213ENST00000579609 LRP6O75581 1613 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 F6X3S4 739 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 STK25O00506 426 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 ZNF790Q6PG37 636 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 MPRIPQ6WCQ1 1025 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 ERC1Q8IUD2 1116 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 LINS1Q8NG48 757 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 IL17RAQ96F46 866 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 AK9Q5TCS8 1911 aa10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 AHDC1Q5TGY3 1603 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-213ENST00000579609 ADCY9O60503 1353 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 COL14A1Q05707 1796 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 USP42Q9H9J4 1324 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 PDE1AP54750 535 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 XPCQ01831 940 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 RABEP1Q15276 862 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 ANTXR1Q9H6X2 564 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 NLRP2Q9NX02 1062 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 CHPF2Q9P2E5 772 aa10.9□□□□□ -0.66
PPP4R1-213ENST00000579609 ERVV-2B6SEH9 535 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 490.5 ms