RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 KCNQ3O43525 872 aa23■■□□□ 1.27
ITGB4-205ENST00000579211 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
ITGB4-205ENST00000579211 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
ITGB4-205ENST00000579211 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
ITGB4-205ENST00000579211 SYT17Q9BSW7 474 aa23■■□□□ 1.27
ITGB4-205ENST00000579211 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
ITGB4-205ENST00000579211 CANXP27824 592 aaKnown RBP22.99■■□□□ 1.27
ITGB4-205ENST00000579211 MIS18AQ9NYP9 233 aa22.99■■□□□ 1.27
ITGB4-205ENST00000579211 ZPR1O75312 459 aa22.98■■□□□ 1.27
ITGB4-205ENST00000579211 NLGN1Q8N2Q7 840 aa22.98■■□□□ 1.27
ITGB4-205ENST00000579211 THUMPD2Q9BTF0 503 aaKnown RBP22.98■■□□□ 1.27
ITGB4-205ENST00000579211 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
ITGB4-205ENST00000579211 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
ITGB4-205ENST00000579211 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
ITGB4-205ENST00000579211 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
ITGB4-205ENST00000579211 SOS1Q07889 1333 aaPredicted RBP22.94■■□□□ 1.26
ITGB4-205ENST00000579211 LAMB4A4D0S4 1761 aa22.94■■□□□ 1.26
ITGB4-205ENST00000579211 COL15A1P39059 1388 aa22.93■■□□□ 1.26
ITGB4-205ENST00000579211 A0A087WZG4 1122 aa22.93■■□□□ 1.26
ITGB4-205ENST00000579211 MMP10P09238 476 aa22.93■■□□□ 1.26
ITGB4-205ENST00000579211 SRP68Q9UHB9 627 aaKnown RBP22.93■■□□□ 1.26
ITGB4-205ENST00000579211 GYS1P13807 737 aa22.92■■□□□ 1.26
ITGB4-205ENST00000579211 CCDC184Q52MB2 194 aa22.92■■□□□ 1.26
ITGB4-205ENST00000579211 TSPYL4Q9UJ04 414 aa22.92■■□□□ 1.26
ITGB4-205ENST00000579211 PARP3Q9Y6F1 533 aa22.92■■□□□ 1.26
ITGB4-205ENST00000579211 USP42Q9H9J4 1324 aaKnown RBP22.91■■□□□ 1.26
ITGB4-205ENST00000579211 USPL1Q5W0Q7 1092 aa22.91■■□□□ 1.26
ITGB4-205ENST00000579211 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
ITGB4-205ENST00000579211 USP16Q9Y5T5 823 aa22.91■■□□□ 1.26
ITGB4-205ENST00000579211 A1BGP04217 495 aa22.9■■□□□ 1.26
ITGB4-205ENST00000579211 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
ITGB4-205ENST00000579211 PRAMEF22A3QJZ6 481 aa22.89■■□□□ 1.25
ITGB4-205ENST00000579211 APAF1O14727 1248 aa22.89■■□□□ 1.25
ITGB4-205ENST00000579211 NARFQ9UHQ1 456 aa22.89■■□□□ 1.25
ITGB4-205ENST00000579211 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
ITGB4-205ENST00000579211 IL6STP40189 918 aaPredicted RBP22.88■■□□□ 1.25
ITGB4-205ENST00000579211 EIF5P55010 431 aaKnown RBP22.87■■□□□ 1.25
ITGB4-205ENST00000579211 FKBP8Q14318 412 aa22.87■■□□□ 1.25
ITGB4-205ENST00000579211 GPR162Q16538 588 aa22.87■■□□□ 1.25
ITGB4-205ENST00000579211 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
ITGB4-205ENST00000579211 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
ITGB4-205ENST00000579211 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
ITGB4-205ENST00000579211 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
ITGB4-205ENST00000579211 CHD4Q14839 1912 aa22.86■■□□□ 1.25
ITGB4-205ENST00000579211 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
ITGB4-205ENST00000579211 PIP4K2AP48426 406 aaPredicted RBP22.85■■□□□ 1.25
ITGB4-205ENST00000579211 TBC1D2BQ9UPU7 963 aa22.85■■□□□ 1.25
ITGB4-205ENST00000579211 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
ITGB4-205ENST00000579211 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
ITGB4-205ENST00000579211 GIGYF1O75420 1035 aaPredicted RBP22.83■■□□□ 1.25
ITGB4-205ENST00000579211 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
ITGB4-205ENST00000579211 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
ITGB4-205ENST00000579211 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
ITGB4-205ENST00000579211 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
ITGB4-205ENST00000579211 DZIP3Q86Y13 1208 aaKnown RBP22.81■■□□□ 1.24
ITGB4-205ENST00000579211 FAM9BQ8IZU0 186 aa22.8■■□□□ 1.24
ITGB4-205ENST00000579211 EIF2S2P20042 333 aaKnown RBP22.79■■□□□ 1.24
ITGB4-205ENST00000579211 TM4SF1P30408 202 aa22.79■■□□□ 1.24
ITGB4-205ENST00000579211 NGEFQ8N5V2 710 aa22.79■■□□□ 1.24
ITGB4-205ENST00000579211 NUP98P52948 1817 aa22.78■■□□□ 1.24
ITGB4-205ENST00000579211 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
ITGB4-205ENST00000579211 CHL1O00533 1208 aa22.78■■□□□ 1.24
ITGB4-205ENST00000579211 MYL6BP14649 208 aa22.77■■□□□ 1.24
ITGB4-205ENST00000579211 DDR1Q08345 913 aa22.77■■□□□ 1.24
ITGB4-205ENST00000579211 NFIXQ14938 502 aa22.77■■□□□ 1.24
ITGB4-205ENST00000579211 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
ITGB4-205ENST00000579211 NBPF26B4DH59 902 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 POLRMTO00411 1230 aaKnown RBP22.76■■□□□ 1.23
ITGB4-205ENST00000579211 NPHP1O15259 732 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 GNAI1P63096 354 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 NBPF10Q6P3W6 841 aaKnown RBP22.76■■□□□ 1.23
ITGB4-205ENST00000579211 NBPF15Q8N660 670 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 BCL2L12Q9HB09 334 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 ZNF652Q9Y2D9 606 aa22.76■■□□□ 1.23
ITGB4-205ENST00000579211 SERPINB2P05120 415 aa22.75■■□□□ 1.23
ITGB4-205ENST00000579211 TGFB2P61812 414 aa22.75■■□□□ 1.23
ITGB4-205ENST00000579211 SETDB2Q96T68 719 aa22.75■■□□□ 1.23
ITGB4-205ENST00000579211 WWC3Q9ULE0 1092 aa22.75■■□□□ 1.23
ITGB4-205ENST00000579211 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
ITGB4-205ENST00000579211 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
ITGB4-205ENST00000579211 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
ITGB4-205ENST00000579211 GRIN3BO60391 1043 aa22.73■■□□□ 1.23
ITGB4-205ENST00000579211 CAMTA2O94983 1202 aa22.73■■□□□ 1.23
ITGB4-205ENST00000579211 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
ITGB4-205ENST00000579211 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
ITGB4-205ENST00000579211 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
ITGB4-205ENST00000579211 KIAA1551Q9HCM1 1747 aa22.72■■□□□ 1.23
ITGB4-205ENST00000579211 NRXN2Q9P2S2 1712 aa22.72■■□□□ 1.23
ITGB4-205ENST00000579211 A0A0G2JLW4 131 aa22.72■■□□□ 1.23
ITGB4-205ENST00000579211 MBIPQ9NS73 344 aa22.72■■□□□ 1.23
ITGB4-205ENST00000579211 ERBB4Q15303 1308 aa22.72■■□□□ 1.23
ITGB4-205ENST00000579211 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
ITGB4-205ENST00000579211 CLEC4GQ6UXB4 293 aa22.71■■□□□ 1.23
ITGB4-205ENST00000579211 YY1P25490 414 aa22.7■■□□□ 1.22
ITGB4-205ENST00000579211 CARMIL3Q8ND23 1372 aa22.7■■□□□ 1.22
ITGB4-205ENST00000579211 DPEP1P16444 411 aa22.69■■□□□ 1.22
ITGB4-205ENST00000579211 YBX3P16989 372 aaKnown RBP eCLIP22.69■■□□□ 1.22
ITGB4-205ENST00000579211 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
ITGB4-205ENST00000579211 KRT24Q2M2I5 525 aa22.69■■□□□ 1.22
ITGB4-205ENST00000579211 PXDNLA1KZ92 1463 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms