RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 TM4SF1P30408 202 aa30.52■■■□□ 2.48
CDKN2A-212ENST00000578845 ZNF496Q96IT1 587 aaPredicted RBP30.52■■■□□ 2.48
CDKN2A-212ENST00000578845 NARFQ9UHQ1 456 aa30.52■■■□□ 2.48
CDKN2A-212ENST00000578845 WWC3Q9ULE0 1092 aa30.52■■■□□ 2.48
CDKN2A-212ENST00000578845 USPL1Q5W0Q7 1092 aa30.51■■■□□ 2.47
CDKN2A-212ENST00000578845 ATP10DQ9P241 1426 aa30.5■■■□□ 2.47
CDKN2A-212ENST00000578845 A0A0G2JLW4 131 aa30.5■■■□□ 2.47
CDKN2A-212ENST00000578845 POLRMTO00411 1230 aaKnown RBP30.5■■■□□ 2.47
CDKN2A-212ENST00000578845 STARD3NLO95772 234 aa30.5■■■□□ 2.47
CDKN2A-212ENST00000578845 BRCA1P38398 1863 aaKnown RBP30.5■■■□□ 2.47
CDKN2A-212ENST00000578845 DPEP1P16444 411 aa30.49■■■□□ 2.47
CDKN2A-212ENST00000578845 TEX13AQ9BXU3 409 aaPredicted RBP30.49■■■□□ 2.47
CDKN2A-212ENST00000578845 EIF5P55010 431 aaKnown RBP30.47■■■□□ 2.47
CDKN2A-212ENST00000578845 KCNA3P22001 575 aa30.46■■■□□ 2.47
CDKN2A-212ENST00000578845 C1QTNF8P60827 252 aa30.46■■■□□ 2.47
CDKN2A-212ENST00000578845 FMNL2Q96PY5 1086 aa30.46■■■□□ 2.47
CDKN2A-212ENST00000578845 BCL2L12Q9HB09 334 aa30.46■■■□□ 2.47
CDKN2A-212ENST00000578845 GIGYF1O75420 1035 aaPredicted RBP30.45■■■□□ 2.47
CDKN2A-212ENST00000578845 NRXN2Q9P2S2 1712 aa30.44■■■□□ 2.46
CDKN2A-212ENST00000578845 BTBD11A6QL63 1104 aa30.44■■■□□ 2.46
CDKN2A-212ENST00000578845 CANXP27824 592 aaKnown RBP30.44■■■□□ 2.46
CDKN2A-212ENST00000578845 BCS1LQ9Y276 419 aa30.44■■■□□ 2.46
CDKN2A-212ENST00000578845 HTATSF1O43719 755 aaKnown RBP30.43■■■□□ 2.46
CDKN2A-212ENST00000578845 NFIXQ14938 502 aa30.43■■■□□ 2.46
CDKN2A-212ENST00000578845 RTF1Q92541 710 aaKnown RBP30.42■■■□□ 2.46
CDKN2A-212ENST00000578845 A0A087WZG4 1122 aa30.41■■■□□ 2.46
CDKN2A-212ENST00000578845 KCNQ3O43525 872 aa30.4■■■□□ 2.46
CDKN2A-212ENST00000578845 AFDNP55196 1824 aaKnown RBP30.39■■■□□ 2.46
CDKN2A-212ENST00000578845 ARFGEF1Q9Y6D6 1849 aa30.39■■■□□ 2.46
CDKN2A-212ENST00000578845 IL6STP40189 918 aaPredicted RBP30.39■■■□□ 2.46
CDKN2A-212ENST00000578845 MCM10Q7L590 875 aa30.39■■■□□ 2.46
CDKN2A-212ENST00000578845 PIM2Q9P1W9 311 aa30.39■■■□□ 2.46
CDKN2A-212ENST00000578845 SCN7AQ01118 1682 aa30.39■■■□□ 2.45
CDKN2A-212ENST00000578845 GPBP1L1Q9HC44 474 aaPredicted RBP30.36■■■□□ 2.45
CDKN2A-212ENST00000578845 SERPINB2P05120 415 aa30.34■■■□□ 2.45
CDKN2A-212ENST00000578845 CHRNA5P30532 468 aa30.34■■■□□ 2.45
CDKN2A-212ENST00000578845 DALRD3Q5D0E6 543 aaKnown RBP30.34■■■□□ 2.45
CDKN2A-212ENST00000578845 PLEKHF1Q96S99 279 aa30.34■■■□□ 2.45
CDKN2A-212ENST00000578845 A1BGP04217 495 aa30.33■■■□□ 2.45
CDKN2A-212ENST00000578845 DCTN1Q14203 1278 aa30.33■■■□□ 2.45
CDKN2A-212ENST00000578845 ARHGAP27Q6ZUM4 889 aa30.32■■■□□ 2.44
CDKN2A-212ENST00000578845 SNRPA1P09661 255 aaKnown RBP30.31■■■□□ 2.44
CDKN2A-212ENST00000578845 USP16Q9Y5T5 823 aa30.31■■■□□ 2.44
CDKN2A-212ENST00000578845 NEFMP07197 916 aa30.3■■■□□ 2.44
CDKN2A-212ENST00000578845 RALBP1Q15311 655 aa30.3■■■□□ 2.44
CDKN2A-212ENST00000578845 DLEC1Q9Y238 1755 aa30.29■■■□□ 2.44
CDKN2A-212ENST00000578845 TAF7Q15545 349 aaPredicted RBP30.29■■■□□ 2.44
CDKN2A-212ENST00000578845 TBC1D9BQ66K14 1250 aa30.29■■■□□ 2.44
CDKN2A-212ENST00000578845 TBC1D2BQ9UPU7 963 aa30.29■■■□□ 2.44
CDKN2A-212ENST00000578845 CAMTA2O94983 1202 aa30.28■■■□□ 2.44
CDKN2A-212ENST00000578845 BCORQ6W2J9 1755 aa30.28■■■□□ 2.44
CDKN2A-212ENST00000578845 CARMIL3Q8ND23 1372 aa30.28■■■□□ 2.44
CDKN2A-212ENST00000578845 DLG5Q8TDM6 1919 aa30.28■■■□□ 2.44
CDKN2A-212ENST00000578845 PRAMEF22A3QJZ6 481 aa30.27■■■□□ 2.44
CDKN2A-212ENST00000578845 ZNF526Q8TF50 670 aaPredicted RBP30.27■■■□□ 2.44
CDKN2A-212ENST00000578845 ZNF330Q9Y3S2 320 aaPredicted RBP30.27■■■□□ 2.44
CDKN2A-212ENST00000578845 SENP3-EIF4A1A0A087X0R7 540 aa30.26■■■□□ 2.43
CDKN2A-212ENST00000578845 NFE2L2Q16236 605 aa30.26■■■□□ 2.43
CDKN2A-212ENST00000578845 NPM2Q86SE8 214 aaKnown RBP30.26■■■□□ 2.43
CDKN2A-212ENST00000578845 PNNQ9H307 717 aaKnown RBP30.26■■■□□ 2.43
CDKN2A-212ENST00000578845 BICDL1Q6ZP65 573 aa30.25■■■□□ 2.43
CDKN2A-212ENST00000578845 CEP350Q5VT06 3117 aa30.25■■■□□ 2.43
CDKN2A-212ENST00000578845 KDM3BQ7LBC6 1761 aa30.23■■■□□ 2.43
CDKN2A-212ENST00000578845 DZIP3Q86Y13 1208 aaKnown RBP30.23■■■□□ 2.43
CDKN2A-212ENST00000578845 PNISRQ8TF01 805 aaKnown RBP30.23■■■□□ 2.43
CDKN2A-212ENST00000578845 RGL2O15211 777 aa30.21■■■□□ 2.43
CDKN2A-212ENST00000578845 PRR5LQ6MZQ0 368 aa30.21■■■□□ 2.43
CDKN2A-212ENST00000578845 PDZRN3Q9UPQ7 1066 aa30.21■■■□□ 2.43
CDKN2A-212ENST00000578845 ANKRD31Q8N7Z5 1873 aa30.21■■■□□ 2.43
CDKN2A-212ENST00000578845 MAPK8IP3Q9UPT6 1336 aa30.21■■■□□ 2.43
CDKN2A-212ENST00000578845 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 KIF3CO14782 793 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 PIP4K2AP48426 406 aaPredicted RBP30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 C9orf131Q5VYM1 1079 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 CLEC4GQ6UXB4 293 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 C2CD5Q86YS7 1000 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 BRIP1Q9BX63 1249 aa30.2■■■□□ 2.43
CDKN2A-212ENST00000578845 NBPF26B4DH59 902 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 H0YIN7 160 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 NBPF10Q6P3W6 841 aaKnown RBP30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 NBPF15Q8N660 670 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 TTLL6Q8N841 843 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 SETDB2Q96T68 719 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 MIS18AQ9NYP9 233 aa30.19■■■□□ 2.42
CDKN2A-212ENST00000578845 DDX10Q13206 875 aaKnown RBP30.18■■■□□ 2.42
CDKN2A-212ENST00000578845 MYBBP1AQ9BQG0 1328 aaKnown RBP30.17■■■□□ 2.42
CDKN2A-212ENST00000578845 PDE6BP35913 854 aa30.16■■■□□ 2.42
CDKN2A-212ENST00000578845 EIF4A1P60842 406 aaKnown RBP30.15■■■□□ 2.42
CDKN2A-212ENST00000578845 CNBD1Q8NA66 436 aa30.15■■■□□ 2.42
CDKN2A-212ENST00000578845 ZNF652Q9Y2D9 606 aa30.15■■■□□ 2.42
CDKN2A-212ENST00000578845 COL11A2P13942 1736 aaPredicted RBP30.14■■■□□ 2.42
CDKN2A-212ENST00000578845 THUMPD2Q9BTF0 503 aaKnown RBP30.14■■■□□ 2.42
CDKN2A-212ENST00000578845 SBF1O95248 1867 aa30.14■■■□□ 2.42
CDKN2A-212ENST00000578845 RNF181Q9P0P0 153 aa30.13■■■□□ 2.41
CDKN2A-212ENST00000578845 ZC3H4Q9UPT8 1303 aaKnown RBP30.11■■■□□ 2.41
CDKN2A-212ENST00000578845 ST5P78524 1137 aa30.1■■■□□ 2.41
CDKN2A-212ENST00000578845 CCDC24Q8N4L8 307 aa30.1■■■□□ 2.41
CDKN2A-212ENST00000578845 RASSF7Q02833 373 aa30.09■■■□□ 2.41
CDKN2A-212ENST00000578845 LMNB1P20700 586 aa30.07■■■□□ 2.4
CDKN2A-212ENST00000578845 RIPK4P57078 832 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms