RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 EIF4A1P60842 406 aaKnown RBP20.13■□□□□ 0.81
DDX42-208ENST00000578681 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 SSFA2P28290 1259 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 RHPN1Q8TCX5 695 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
DDX42-208ENST00000578681 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 XAGE3Q8WTP9 111 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
DDX42-208ENST00000578681 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
DDX42-208ENST00000578681 BOLA2Q9H3K6 86 aa20.11■□□□□ 0.81
DDX42-208ENST00000578681 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
DDX42-208ENST00000578681 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
DDX42-208ENST00000578681 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
DDX42-208ENST00000578681 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
DDX42-208ENST00000578681 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 ARHGEF25Q86VW2 580 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 KLHDC4Q8TBB5 520 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 OVOS2A0A0J9YW53 1432 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 OVOS2Q6IE36 1432 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 DTNBO60941 627 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 HYPKQ9NX55 129 aa20.08■□□□□ 0.81
DDX42-208ENST00000578681 RRP9O43818 475 aaKnown RBP20.08■□□□□ 0.8
DDX42-208ENST00000578681 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
DDX42-208ENST00000578681 TECPR2O15040 1411 aa20.08■□□□□ 0.8
DDX42-208ENST00000578681 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.8
DDX42-208ENST00000578681 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 NUCB2P80303 420 aa20.07■□□□□ 0.8
DDX42-208ENST00000578681 FAM43AQ8N2R8 423 aa20.07■□□□□ 0.8
DDX42-208ENST00000578681 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
DDX42-208ENST00000578681 KSR2Q6VAB6 950 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 A0A087WZG4 1122 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 PTCH1Q13635 1447 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 RBM25P49756 843 aaKnown RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 CAVIN1Q6NZI2 390 aaKnown RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 RAB11FIP3O75154 756 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2EB1AL46 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2AQ8IVF1 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 ZNF496Q96IT1 587 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NPHP1O15259 732 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 GRM8O00222 908 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 FOSBP53539 338 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
DDX42-208ENST00000578681 GLRX3O76003 335 aaKnown RBP20.02■□□□□ 0.79
DDX42-208ENST00000578681 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.79
DDX42-208ENST00000578681 USP16Q9Y5T5 823 aa20.02■□□□□ 0.79
DDX42-208ENST00000578681 PRPF40BQ6NWY9 871 aaKnown RBP20.01■□□□□ 0.79
DDX42-208ENST00000578681 GOLGA6L4A6NEF3 574 aa20.01■□□□□ 0.79
DDX42-208ENST00000578681 ADAMTS2O95450 1211 aa20.01■□□□□ 0.79
DDX42-208ENST00000578681 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
DDX42-208ENST00000578681 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
DDX42-208ENST00000578681 JAKMIP1Q96N16 626 aaKnown RBP20■□□□□ 0.79
DDX42-208ENST00000578681 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
DDX42-208ENST00000578681 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
DDX42-208ENST00000578681 CRB1P82279 1406 aa20■□□□□ 0.79
DDX42-208ENST00000578681 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 CHMLP26374 656 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 STK3Q13188 491 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 SKOR2Q2VWA4 1001 aaPredicted RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
DDX42-208ENST00000578681 SNX21Q969T3 373 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 CIZ1Q9ULV3 898 aaPredicted RBP19.98■□□□□ 0.79
DDX42-208ENST00000578681 CPA1P15085 419 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 ADGRB2O60241 1585 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.97■□□□□ 0.79
DDX42-208ENST00000578681 GPTP24298 496 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 PTMSP20962 102 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 RNF214Q8ND24 703 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 SUCLG2Q96I99 432 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms