RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 ZDHHC1Q8WTX9 485 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
PTPRM-207ENST00000578571 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
PTPRM-207ENST00000578571 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
PTPRM-207ENST00000578571 PHKA2P46019 1235 aa8.75□□□□□ -1.01
PTPRM-207ENST00000578571 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
PTPRM-207ENST00000578571 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
PTPRM-207ENST00000578571 NCAPD3P42695 1498 aa8.75□□□□□ -1.01
PTPRM-207ENST00000578571 BAZ1BQ9UIG0 1483 aaKnown RBP8.75□□□□□ -1.01
PTPRM-207ENST00000578571 SLC35F4A4IF30 521 aa8.74□□□□□ -1.01
PTPRM-207ENST00000578571 WEE1P30291 646 aa8.74□□□□□ -1.01
PTPRM-207ENST00000578571 NIFKQ9BYG3 293 aaKnown RBP8.74□□□□□ -1.01
PTPRM-207ENST00000578571 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 CSB-PGBD3P0DP91 1061 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 TEAD4Q15561 434 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 POTEAQ6S8J7 498 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 RETREG2Q8NC44 543 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 SCG3Q8WXD2 468 aaKnown RBP8.73□□□□□ -1.01
PTPRM-207ENST00000578571 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
PTPRM-207ENST00000578571 WIZO95785 1651 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 IGFBP4P22692 258 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 OCLNQ16625 522 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
PTPRM-207ENST00000578571 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 DYRK1BQ9Y463 629 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
PTPRM-207ENST00000578571 EML1O00423 815 aa8.71□□□□□ -1.02
PTPRM-207ENST00000578571 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
PTPRM-207ENST00000578571 NOS2P35228 1153 aa8.71□□□□□ -1.02
PTPRM-207ENST00000578571 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
PTPRM-207ENST00000578571 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.02
PTPRM-207ENST00000578571 PRIMPOLQ96LW4 560 aa8.71□□□□□ -1.02
PTPRM-207ENST00000578571 PRMT3O60678 531 aa8.7□□□□□ -1.02
PTPRM-207ENST00000578571 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
PTPRM-207ENST00000578571 L3MBTL2Q969R5 705 aa8.7□□□□□ -1.02
PTPRM-207ENST00000578571 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-207ENST00000578571 USTQ9Y2C2 406 aa8.7□□□□□ -1.02
PTPRM-207ENST00000578571 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
PTPRM-207ENST00000578571 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
PTPRM-207ENST00000578571 SERTM1A2A2V5 107 aa8.69□□□□□ -1.02
PTPRM-207ENST00000578571 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
PTPRM-207ENST00000578571 ATP4AP20648 1035 aa8.69□□□□□ -1.02
PTPRM-207ENST00000578571 HIRAP54198 1017 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-207ENST00000578571 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
PTPRM-207ENST00000578571 MSX1P28360 303 aa8.68□□□□□ -1.02
PTPRM-207ENST00000578571 TXLNAP40222 546 aa8.68□□□□□ -1.02
PTPRM-207ENST00000578571 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-207ENST00000578571 GAS2L1Q99501 681 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-207ENST00000578571 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-207ENST00000578571 ZNF232Q9UNY5 417 aa8.68□□□□□ -1.02
PTPRM-207ENST00000578571 FOXO3O43524 673 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 F11P03951 625 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 ITGA6P23229 1130 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 VEGFBP49765 207 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
PTPRM-207ENST00000578571 GPAMQ9HCL2 828 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
PTPRM-207ENST00000578571 CXXC1Q9P0U4 656 aaPredicted RBP8.67□□□□□ -1.02
PTPRM-207ENST00000578571 H3BM21 787 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 ATP2B4P23634 1241 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 NBPF1Q3BBV0 1214 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 NPAS3Q8IXF0 933 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 C7orf43Q8WVR3 580 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
PTPRM-207ENST00000578571 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
PTPRM-207ENST00000578571 THBS1P07996 1170 aa8.65□□□□□ -1.02
PTPRM-207ENST00000578571 C1orf216Q8TAB5 229 aa8.65□□□□□ -1.02
PTPRM-207ENST00000578571 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
PTPRM-207ENST00000578571 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
PTPRM-207ENST00000578571 SSFA2P28290 1259 aa8.64□□□□□ -1.03
PTPRM-207ENST00000578571 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
PTPRM-207ENST00000578571 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
PTPRM-207ENST00000578571 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-207ENST00000578571 CRISPLD1Q9H336 500 aa8.64□□□□□ -1.03
PTPRM-207ENST00000578571 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
PTPRM-207ENST00000578571 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-207ENST00000578571 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
PTPRM-207ENST00000578571 DBN1Q16643 649 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 TRIM22Q8IYM9 498 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 KLRG1Q96E93 195 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 PHACTR1Q9C0D0 580 aa8.63□□□□□ -1.03
PTPRM-207ENST00000578571 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
PTPRM-207ENST00000578571 ALDH16A1Q8IZ83 802 aa8.62□□□□□ -1.03
PTPRM-207ENST00000578571 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
PTPRM-207ENST00000578571 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-207ENST00000578571 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
PTPRM-207ENST00000578571 SCNN1AP37088 669 aa8.61□□□□□ -1.03
PTPRM-207ENST00000578571 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
PTPRM-207ENST00000578571 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
PTPRM-207ENST00000578571 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
PTPRM-207ENST00000578571 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
PTPRM-207ENST00000578571 QTRT2Q9H974 415 aaKnown RBP8.61□□□□□ -1.03
PTPRM-207ENST00000578571 ERBB4Q15303 1308 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms