RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
SMARCD2-207ENST00000578234 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
SMARCD2-207ENST00000578234 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
SMARCD2-207ENST00000578234 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
SMARCD2-207ENST00000578234 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
SMARCD2-207ENST00000578234 COL15A1P39059 1388 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 CHRNA5P30532 468 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 ZBTB1Q9Y2K1 713 aa16.9■□□□□ 0.3
SMARCD2-207ENST00000578234 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.3
SMARCD2-207ENST00000578234 STARD3NLO95772 234 aa16.89■□□□□ 0.29
SMARCD2-207ENST00000578234 TEFQ10587 303 aa16.89■□□□□ 0.29
SMARCD2-207ENST00000578234 NFIXQ14938 502 aa16.89■□□□□ 0.29
SMARCD2-207ENST00000578234 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
SMARCD2-207ENST00000578234 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
SMARCD2-207ENST00000578234 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
SMARCD2-207ENST00000578234 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
SMARCD2-207ENST00000578234 BCL2L12Q9HB09 334 aa16.88■□□□□ 0.29
SMARCD2-207ENST00000578234 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
SMARCD2-207ENST00000578234 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
SMARCD2-207ENST00000578234 TOMM70O94826 608 aa16.87■□□□□ 0.29
SMARCD2-207ENST00000578234 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
SMARCD2-207ENST00000578234 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
SMARCD2-207ENST00000578234 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
SMARCD2-207ENST00000578234 ZNF790Q6PG37 636 aa16.87■□□□□ 0.29
SMARCD2-207ENST00000578234 SERPINB2P05120 415 aa16.86■□□□□ 0.29
SMARCD2-207ENST00000578234 APLP1P51693 650 aa16.86■□□□□ 0.29
SMARCD2-207ENST00000578234 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
SMARCD2-207ENST00000578234 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
SMARCD2-207ENST00000578234 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
SMARCD2-207ENST00000578234 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
SMARCD2-207ENST00000578234 A0A087WZG4 1122 aa16.85■□□□□ 0.29
SMARCD2-207ENST00000578234 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
SMARCD2-207ENST00000578234 HEG1Q9ULI3 1381 aa16.85■□□□□ 0.29
SMARCD2-207ENST00000578234 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
SMARCD2-207ENST00000578234 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
SMARCD2-207ENST00000578234 NPHP1O15259 732 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
SMARCD2-207ENST00000578234 IL6STP40189 918 aaPredicted RBP16.82■□□□□ 0.28
SMARCD2-207ENST00000578234 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SMARCD2-207ENST00000578234 SBF1O95248 1867 aa16.82■□□□□ 0.28
SMARCD2-207ENST00000578234 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
SMARCD2-207ENST00000578234 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
SMARCD2-207ENST00000578234 H0YIN7 160 aa16.8■□□□□ 0.28
SMARCD2-207ENST00000578234 TBC1D9BQ66K14 1250 aa16.8■□□□□ 0.28
SMARCD2-207ENST00000578234 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
SMARCD2-207ENST00000578234 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 PPP2R1AP30153 589 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 HTRA3P83110 453 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 RASSF7Q02833 373 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 RBM46Q8TBY0 533 aaKnown RBP16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
SMARCD2-207ENST00000578234 ZC3H4Q9UPT8 1303 aaKnown RBP16.78■□□□□ 0.28
SMARCD2-207ENST00000578234 A1BGP04217 495 aa16.78■□□□□ 0.28
SMARCD2-207ENST00000578234 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
SMARCD2-207ENST00000578234 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMARCD2-207ENST00000578234 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 KCNQ3O43525 872 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 LMNB1P20700 586 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 PDE6BP35913 854 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 CCDC24Q8N4L8 307 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
SMARCD2-207ENST00000578234 FSTL1Q12841 308 aa16.76■□□□□ 0.27
SMARCD2-207ENST00000578234 PRR5LQ6MZQ0 368 aa16.76■□□□□ 0.27
SMARCD2-207ENST00000578234 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
SMARCD2-207ENST00000578234 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
SMARCD2-207ENST00000578234 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
SMARCD2-207ENST00000578234 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
SMARCD2-207ENST00000578234 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
SMARCD2-207ENST00000578234 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
SMARCD2-207ENST00000578234 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
SMARCD2-207ENST00000578234 PRELPP51888 382 aa16.74■□□□□ 0.27
SMARCD2-207ENST00000578234 MCM10Q7L590 875 aa16.74■□□□□ 0.27
SMARCD2-207ENST00000578234 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
SMARCD2-207ENST00000578234 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
SMARCD2-207ENST00000578234 TNRC6CQ9HCJ0 1690 aaKnown RBP16.73■□□□□ 0.27
SMARCD2-207ENST00000578234 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
SMARCD2-207ENST00000578234 NFKBIEO00221 500 aa16.73■□□□□ 0.27
SMARCD2-207ENST00000578234 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
SMARCD2-207ENST00000578234 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
SMARCD2-207ENST00000578234 WDR90Q96KV7 1748 aa16.71■□□□□ 0.27
SMARCD2-207ENST00000578234 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
SMARCD2-207ENST00000578234 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
SMARCD2-207ENST00000578234 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
SMARCD2-207ENST00000578234 RGL2O15211 777 aa16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 C21orf2O43822 256 aa16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 SRGNP10124 158 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms