RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 TERF1P54274 439 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 NUP160Q12769 1436 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 NOLC1Q14978 699 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 RNF41Q9H4P4 317 aaPredicted RBP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 ABCA10Q8WWZ4 1543 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 CABP4P57796 275 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 GBP2P32456 591 aaPredicted RBP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
SEC22B-201ENST00000578049 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
SEC22B-201ENST00000578049 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 FAM135AQ9P2D6 1515 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 FAM193AP78312 1265 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 MAP4K4O95819 1239 aaPredicted RBP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 BMP15O95972 392 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 DESP17661 470 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 SPAG1Q07617 926 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 FEZ1Q99689 392 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 TSG101Q99816 390 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
SEC22B-201ENST00000578049 LUZP1Q86V48 1076 aa12.44□□□□□ -0.42
SEC22B-201ENST00000578049 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
SEC22B-201ENST00000578049 GOLIM4O00461 696 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
SEC22B-201ENST00000578049 CKAP4Q07065 602 aaKnown RBP12.43□□□□□ -0.42
SEC22B-201ENST00000578049 SKIDA1Q1XH10 827 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
SEC22B-201ENST00000578049 CUL7Q14999 1698 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 GJB2P29033 226 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 DBF4Q9UBU7 674 aaPredicted RBP12.42□□□□□ -0.42
SEC22B-201ENST00000578049 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 TAOK3Q9H2K8 898 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 MAGI1Q96QZ7 1491 aaPredicted RBP12.42□□□□□ -0.42
SEC22B-201ENST00000578049 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 CCDC102BQ68D86 513 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 ZMYND15Q9H091 742 aa12.42□□□□□ -0.42
SEC22B-201ENST00000578049 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
SEC22B-201ENST00000578049 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
SEC22B-201ENST00000578049 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
SEC22B-201ENST00000578049 CTAGE1Q96RT6 745 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
SEC22B-201ENST00000578049 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 INSRP06213 1382 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 IGHDP01880 384 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
SEC22B-201ENST00000578049 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 SPECC1LQ69YQ0 1117 aa12.41□□□□□ -0.42
SEC22B-201ENST00000578049 CCDC175P0C221 793 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 HCLS1P14317 486 aaPredicted RBP12.4□□□□□ -0.42
SEC22B-201ENST00000578049 DYDC1Q8WWB3 177 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 PLCD4Q9BRC7 762 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
SEC22B-201ENST00000578049 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
SEC22B-201ENST00000578049 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 SLU7O95391 586 aaKnown RBP12.4□□□□□ -0.42
SEC22B-201ENST00000578049 FLIIQ13045 1269 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 CCDC94Q9BW85 323 aaPredicted RBP12.4□□□□□ -0.42
SEC22B-201ENST00000578049 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 PIK3R4Q99570 1358 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 AMPD3Q01432 767 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 DDX12PQ92771 950 aa12.4□□□□□ -0.42
SEC22B-201ENST00000578049 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 NUP88Q99567 741 aaPredicted RBP12.39□□□□□ -0.43
SEC22B-201ENST00000578049 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
SEC22B-201ENST00000578049 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 NAPBQ9H115 298 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms