RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-206ENST00000577645 CCER2I3L3R5 266 aa12.81□□□□□ -0.36
NUP85-206ENST00000577645 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
NUP85-206ENST00000577645 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
NUP85-206ENST00000577645 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
NUP85-206ENST00000577645 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
NUP85-206ENST00000577645 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
NUP85-206ENST00000577645 CCDC87Q9NVE4 849 aa12.8□□□□□ -0.36
NUP85-206ENST00000577645 COL15A1P39059 1388 aa12.8□□□□□ -0.36
NUP85-206ENST00000577645 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
NUP85-206ENST00000577645 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
NUP85-206ENST00000577645 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
NUP85-206ENST00000577645 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
NUP85-206ENST00000577645 A0A087WZG4 1122 aa12.78□□□□□ -0.36
NUP85-206ENST00000577645 RGL2O15211 777 aa12.78□□□□□ -0.36
NUP85-206ENST00000577645 PHF14O94880 888 aa12.78□□□□□ -0.36
NUP85-206ENST00000577645 RFC4P35249 363 aa12.78□□□□□ -0.36
NUP85-206ENST00000577645 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
NUP85-206ENST00000577645 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
NUP85-206ENST00000577645 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
NUP85-206ENST00000577645 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
NUP85-206ENST00000577645 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
NUP85-206ENST00000577645 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
NUP85-206ENST00000577645 YY1P25490 414 aa12.77□□□□□ -0.37
NUP85-206ENST00000577645 CALD1Q05682 793 aaKnown RBP12.77□□□□□ -0.37
NUP85-206ENST00000577645 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
NUP85-206ENST00000577645 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
NUP85-206ENST00000577645 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
NUP85-206ENST00000577645 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
NUP85-206ENST00000577645 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
NUP85-206ENST00000577645 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
NUP85-206ENST00000577645 IL6STP40189 918 aaPredicted RBP12.76□□□□□ -0.37
NUP85-206ENST00000577645 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
NUP85-206ENST00000577645 MCM10Q7L590 875 aa12.76□□□□□ -0.37
NUP85-206ENST00000577645 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
NUP85-206ENST00000577645 SYT17Q9BSW7 474 aa12.76□□□□□ -0.37
NUP85-206ENST00000577645 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
NUP85-206ENST00000577645 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
NUP85-206ENST00000577645 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
NUP85-206ENST00000577645 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
NUP85-206ENST00000577645 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
NUP85-206ENST00000577645 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
NUP85-206ENST00000577645 ZPR1O75312 459 aa12.74□□□□□ -0.37
NUP85-206ENST00000577645 RIPK4P57078 832 aa12.74□□□□□ -0.37
NUP85-206ENST00000577645 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
NUP85-206ENST00000577645 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
NUP85-206ENST00000577645 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
NUP85-206ENST00000577645 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
NUP85-206ENST00000577645 GYS1P13807 737 aa12.73□□□□□ -0.37
NUP85-206ENST00000577645 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
NUP85-206ENST00000577645 NUP98P52948 1817 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
NUP85-206ENST00000577645 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 UTRNP46939 3433 aa12.72□□□□□ -0.37
NUP85-206ENST00000577645 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 MMP10P09238 476 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 HOXB7P09629 217 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
NUP85-206ENST00000577645 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.38
NUP85-206ENST00000577645 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
NUP85-206ENST00000577645 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
NUP85-206ENST00000577645 TGFB2P61812 414 aa12.69□□□□□ -0.38
NUP85-206ENST00000577645 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
NUP85-206ENST00000577645 CLEC4GQ6UXB4 293 aa12.69□□□□□ -0.38
NUP85-206ENST00000577645 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
NUP85-206ENST00000577645 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
NUP85-206ENST00000577645 GRIN3BO60391 1043 aa12.68□□□□□ -0.38
NUP85-206ENST00000577645 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
NUP85-206ENST00000577645 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
NUP85-206ENST00000577645 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
NUP85-206ENST00000577645 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
NUP85-206ENST00000577645 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
NUP85-206ENST00000577645 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
NUP85-206ENST00000577645 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
NUP85-206ENST00000577645 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
NUP85-206ENST00000577645 ANKRD31Q8N7Z5 1873 aa12.67□□□□□ -0.38
NUP85-206ENST00000577645 IBTKQ9P2D0 1353 aaPredicted RBP12.67□□□□□ -0.38
NUP85-206ENST00000577645 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
NUP85-206ENST00000577645 GNAI1P63096 354 aa12.66□□□□□ -0.38
NUP85-206ENST00000577645 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
NUP85-206ENST00000577645 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
NUP85-206ENST00000577645 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
NUP85-206ENST00000577645 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
NUP85-206ENST00000577645 CHL1O00533 1208 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 KCNQ3O43525 872 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 TM4SF1P30408 202 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
NUP85-206ENST00000577645 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
NUP85-206ENST00000577645 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
NUP85-206ENST00000577645 IL16Q14005 1332 aa12.64□□□□□ -0.39
NUP85-206ENST00000577645 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
NUP85-206ENST00000577645 GPR162Q16538 588 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms