RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 ZNF652Q9Y2D9 606 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 UBXN4Q92575 508 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 NCAPGQ9BPX3 1015 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 RPAINQ86UA6 219 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 CKAP2LQ8IYA6 745 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 ZNF830Q96NB3 372 aaPredicted RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 RIPK4P57078 832 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 GMNNO75496 209 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 CUL5Q93034 780 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 MAP3K1Q13233 1512 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 GEN1Q17RS7 908 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 SPOUT1Q5T280 376 aaKnown RBP10.18□□□□□ -0.78
CDH8-203ENST00000577390 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 CASQ1P31415 396 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 LUZP1Q86V48 1076 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 U2AF2P26368 475 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH8-203ENST00000577390 DNA2P51530 1060 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
CDH8-203ENST00000577390 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
CDH8-203ENST00000577390 BICD1Q96G01 975 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 WDR63Q8IWG1 891 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 CCDC158Q5M9N0 1113 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH8-203ENST00000577390 FSD1Q9BTV5 496 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH8-203ENST00000577390 PSMA5P28066 241 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 MXRA7P84157 204 aa10.18□□□□□ -0.78
CDH8-203ENST00000577390 IRAK4Q9NWZ3 460 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 GABPAQ06546 454 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 ANAPC4Q9UJX5 808 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 LOC102724159A0A0B4J2E5 919 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 PWP2Q15269 919 aaKnown RBP10.17□□□□□ -0.78
CDH8-203ENST00000577390 C6orf163Q5TEZ5 329 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 DACT3Q96B18 629 aaPredicted RBP10.17□□□□□ -0.78
CDH8-203ENST00000577390 A0A1B0GUA9 196 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 CCDC129Q6ZRS4 1044 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 TMEM51Q9NW97 253 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 MIA2Q96PC5 1412 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
CDH8-203ENST00000577390 ITM2BQ9Y287 266 aa10.17□□□□□ -0.78
CDH8-203ENST00000577390 CRCPO75575 148 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 PLS1Q14651 629 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC6Q16204 474 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 PSPC1Q8WXF1 523 aaKnown RBP10.16□□□□□ -0.78
CDH8-203ENST00000577390 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 PTPN14Q15678 1187 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 AP1ARQ63HQ0 302 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 KRBA2Q6ZNG9 492 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC96Q2M329 555 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
CDH8-203ENST00000577390 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 RNF123Q5XPI4 1314 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 NOL3O60936 208 aaKnown RBP10.16□□□□□ -0.78
CDH8-203ENST00000577390 ZPR1O75312 459 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 ZBTB16Q05516 673 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 GSDMBQ8TAX9 411 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC144CPQ8IYA2 1237 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC144AA2RUR9 1427 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 NEMFO60524 1076 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 ACBD5Q5T8D3 534 aaPredicted RBP10.16□□□□□ -0.78
CDH8-203ENST00000577390 ADCY5O95622 1261 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 VPS36Q86VN1 386 aa10.16□□□□□ -0.78
CDH8-203ENST00000577390 MPNDQ8N594 471 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 CCDC171Q6TFL3 1326 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 ERCC3P19447 782 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 FEZ2Q9UHY8 353 aaPredicted RBP10.15□□□□□ -0.78
CDH8-203ENST00000577390 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 CCT6BQ92526 530 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 SFMBT1Q9UHJ3 866 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.78
CDH8-203ENST00000577390 STK38Q15208 465 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 NACA2Q9H009 215 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 COG6Q9Y2V7 657 aa10.15□□□□□ -0.78
CDH8-203ENST00000577390 CEP57L1Q8IYX8 460 aa10.15□□□□□ -0.79
CDH8-203ENST00000577390 NOD1Q9Y239 953 aa10.15□□□□□ -0.79
CDH8-203ENST00000577390 PPP1R12AO14974 1030 aaPredicted RBP10.14□□□□□ -0.79
CDH8-203ENST00000577390 MAFGO15525 162 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 NBPF6Q5VWK0 638 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 NBPF5PQ86XG9 351 aaPredicted RBP10.14□□□□□ -0.79
CDH8-203ENST00000577390 NBPF4Q96M43 638 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 NLRP5P59047 1200 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
CDH8-203ENST00000577390 EHMT1Q9H9B1 1298 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
CDH8-203ENST00000577390 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
CDH8-203ENST00000577390 SYCP3Q8IZU3 236 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms