RNA–Protein interactions for RNA: ENST00000577249.1

CDC6-203, Transcript of cell division cycle 6, humanhuman

TSL 4

Gene CDC6, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-203ENST00000577249 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
CDC6-203ENST00000577249 ZNF496Q96IT1 587 aaPredicted RBP24.27■■□□□ 1.48
CDC6-203ENST00000577249 STARD3NLO95772 234 aa24.26■■□□□ 1.47
CDC6-203ENST00000577249 RIPK4P57078 832 aa24.26■■□□□ 1.47
CDC6-203ENST00000577249 PNISRQ8TF01 805 aaKnown RBP24.26■■□□□ 1.47
CDC6-203ENST00000577249 CCDC87Q9NVE4 849 aa24.26■■□□□ 1.47
CDC6-203ENST00000577249 TJP1Q07157 1748 aa24.26■■□□□ 1.47
CDC6-203ENST00000577249 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
CDC6-203ENST00000577249 UBR2Q8IWV8 1755 aa24.25■■□□□ 1.47
CDC6-203ENST00000577249 CYP19A1P11511 503 aaPredicted RBP24.25■■□□□ 1.47
CDC6-203ENST00000577249 RFC4P35249 363 aa24.25■■□□□ 1.47
CDC6-203ENST00000577249 TMPOP42166 694 aaKnown RBP24.25■■□□□ 1.47
CDC6-203ENST00000577249 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
CDC6-203ENST00000577249 INTS5Q6P9B9 1019 aaKnown RBP24.24■■□□□ 1.47
CDC6-203ENST00000577249 ARHGEF1Q92888 912 aaKnown RBP24.24■■□□□ 1.47
CDC6-203ENST00000577249 ZNF526Q8TF50 670 aaPredicted RBP24.23■■□□□ 1.47
CDC6-203ENST00000577249 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
CDC6-203ENST00000577249 MYH14Q7Z406 1995 aaKnown RBP24.22■■□□□ 1.47
CDC6-203ENST00000577249 C4AP0C0L4 1744 aa24.21■■□□□ 1.47
CDC6-203ENST00000577249 KCNQ3O43525 872 aa24.21■■□□□ 1.47
CDC6-203ENST00000577249 NLGN1Q8N2Q7 840 aa24.2■■□□□ 1.46
CDC6-203ENST00000577249 N4BP2Q86UW6 1770 aaPredicted RBP24.2■■□□□ 1.46
CDC6-203ENST00000577249 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
CDC6-203ENST00000577249 GPBP1L1Q9HC44 474 aaPredicted RBP24.19■■□□□ 1.46
CDC6-203ENST00000577249 PXDNLA1KZ92 1463 aa24.19■■□□□ 1.46
CDC6-203ENST00000577249 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
CDC6-203ENST00000577249 SNRPA1P09661 255 aaKnown RBP24.18■■□□□ 1.46
CDC6-203ENST00000577249 NEUROD2Q15784 382 aa24.18■■□□□ 1.46
CDC6-203ENST00000577249 ZBTB1Q9Y2K1 713 aa24.18■■□□□ 1.46
CDC6-203ENST00000577249 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
CDC6-203ENST00000577249 KIF13BQ9NQT8 1826 aa24.18■■□□□ 1.46
CDC6-203ENST00000577249 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
CDC6-203ENST00000577249 MIS18AQ9NYP9 233 aa24.17■■□□□ 1.46
CDC6-203ENST00000577249 KIAA1551Q9HCM1 1747 aa24.16■■□□□ 1.46
CDC6-203ENST00000577249 ZPR1O75312 459 aa24.16■■□□□ 1.46
CDC6-203ENST00000577249 GYS1P13807 737 aa24.16■■□□□ 1.46
CDC6-203ENST00000577249 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
CDC6-203ENST00000577249 PARP3Q9Y6F1 533 aa24.16■■□□□ 1.46
CDC6-203ENST00000577249 ADCY9O60503 1353 aa24.16■■□□□ 1.46
CDC6-203ENST00000577249 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
CDC6-203ENST00000577249 NPM2Q86SE8 214 aaKnown RBP24.15■■□□□ 1.46
CDC6-203ENST00000577249 BABAM1Q9NWV8 329 aa24.15■■□□□ 1.46
CDC6-203ENST00000577249 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
CDC6-203ENST00000577249 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
CDC6-203ENST00000577249 USP42Q9H9J4 1324 aaKnown RBP24.14■■□□□ 1.46
CDC6-203ENST00000577249 A0A087WZG4 1122 aa24.14■■□□□ 1.45
CDC6-203ENST00000577249 A0A0G2JLW4 131 aa24.14■■□□□ 1.45
CDC6-203ENST00000577249 SRP68Q9UHB9 627 aaKnown RBP24.13■■□□□ 1.45
CDC6-203ENST00000577249 COL15A1P39059 1388 aa24.13■■□□□ 1.45
CDC6-203ENST00000577249 IL6STP40189 918 aaPredicted RBP24.12■■□□□ 1.45
CDC6-203ENST00000577249 EIF5P55010 431 aaKnown RBP24.12■■□□□ 1.45
CDC6-203ENST00000577249 TGFB2P61812 414 aa24.12■■□□□ 1.45
CDC6-203ENST00000577249 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
CDC6-203ENST00000577249 USP16Q9Y5T5 823 aa24.12■■□□□ 1.45
CDC6-203ENST00000577249 APAF1O14727 1248 aa24.11■■□□□ 1.45
CDC6-203ENST00000577249 DPEP1P16444 411 aa24.11■■□□□ 1.45
CDC6-203ENST00000577249 EIF4A1P60842 406 aaKnown RBP24.11■■□□□ 1.45
CDC6-203ENST00000577249 NARFQ9UHQ1 456 aa24.11■■□□□ 1.45
CDC6-203ENST00000577249 TRIM35Q9UPQ4 493 aa24.11■■□□□ 1.45
CDC6-203ENST00000577249 A1BGP04217 495 aa24.1■■□□□ 1.45
CDC6-203ENST00000577249 USPL1Q5W0Q7 1092 aa24.09■■□□□ 1.45
CDC6-203ENST00000577249 KDM3BQ7LBC6 1761 aa24.08■■□□□ 1.45
CDC6-203ENST00000577249 PRAMEF22A3QJZ6 481 aa24.08■■□□□ 1.45
CDC6-203ENST00000577249 FKBP8Q14318 412 aa24.08■■□□□ 1.45
CDC6-203ENST00000577249 ZNF330Q9Y3S2 320 aaPredicted RBP24.08■■□□□ 1.45
CDC6-203ENST00000577249 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
CDC6-203ENST00000577249 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
CDC6-203ENST00000577249 BRCA1P38398 1863 aaKnown RBP24.06■■□□□ 1.44
CDC6-203ENST00000577249 DDR1Q08345 913 aa24.05■■□□□ 1.44
CDC6-203ENST00000577249 CHL1O00533 1208 aa24.04■■□□□ 1.44
CDC6-203ENST00000577249 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
CDC6-203ENST00000577249 TM4SF1P30408 202 aa24.02■■□□□ 1.44
CDC6-203ENST00000577249 CFAP44Q96MT7 982 aa24.02■■□□□ 1.44
CDC6-203ENST00000577249 TBC1D2BQ9UPU7 963 aa24.02■■□□□ 1.44
CDC6-203ENST00000577249 DZIP3Q86Y13 1208 aaKnown RBP24.01■■□□□ 1.43
CDC6-203ENST00000577249 PIP4K2AP48426 406 aaPredicted RBP24■■□□□ 1.43
CDC6-203ENST00000577249 BCL2L12Q9HB09 334 aa24■■□□□ 1.43
CDC6-203ENST00000577249 PIM2Q9P1W9 311 aa24■■□□□ 1.43
CDC6-203ENST00000577249 ARFGEF1Q9Y6D6 1849 aa24■■□□□ 1.43
CDC6-203ENST00000577249 NBPF26B4DH59 902 aa23.99■■□□□ 1.43
CDC6-203ENST00000577249 CHRNA5P30532 468 aa23.99■■□□□ 1.43
CDC6-203ENST00000577249 NFIXQ14938 502 aa23.99■■□□□ 1.43
CDC6-203ENST00000577249 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
CDC6-203ENST00000577249 NBPF10Q6P3W6 841 aaKnown RBP23.99■■□□□ 1.43
CDC6-203ENST00000577249 NBPF15Q8N660 670 aa23.99■■□□□ 1.43
CDC6-203ENST00000577249 ERBB4Q15303 1308 aa23.99■■□□□ 1.43
CDC6-203ENST00000577249 LAMB4A4D0S4 1761 aa23.98■■□□□ 1.43
CDC6-203ENST00000577249 POLRMTO00411 1230 aaKnown RBP23.98■■□□□ 1.43
CDC6-203ENST00000577249 KCNA3P22001 575 aa23.98■■□□□ 1.43
CDC6-203ENST00000577249 GNAI1P63096 354 aa23.98■■□□□ 1.43
CDC6-203ENST00000577249 CCDC27Q2M243 656 aa23.98■■□□□ 1.43
CDC6-203ENST00000577249 DALRD3Q5D0E6 543 aaKnown RBP23.98■■□□□ 1.43
CDC6-203ENST00000577249 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
CDC6-203ENST00000577249 KIF3CO14782 793 aa23.97■■□□□ 1.43
CDC6-203ENST00000577249 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
CDC6-203ENST00000577249 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
CDC6-203ENST00000577249 RGL2O15211 777 aa23.96■■□□□ 1.43
CDC6-203ENST00000577249 HSPA6P17066 643 aa23.96■■□□□ 1.43
CDC6-203ENST00000577249 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
CDC6-203ENST00000577249 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms