RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 PCDH11YQ9BZA8 1340 aa26.48■■□□□ 1.83
KRT18P55-201ENST00000577198 APBB1O00213 710 aa26.48■■□□□ 1.83
KRT18P55-201ENST00000577198 UBTFL1P0CB47 393 aaPredicted RBP26.48■■□□□ 1.83
KRT18P55-201ENST00000577198 HYPKQ9NX55 129 aa26.48■■□□□ 1.83
KRT18P55-201ENST00000577198 AHDC1Q5TGY3 1603 aaPredicted RBP26.48■■□□□ 1.83
KRT18P55-201ENST00000577198 NBPF7P0C2Y1 421 aaPredicted RBP26.47■■□□□ 1.83
KRT18P55-201ENST00000577198 IL2RBP14784 551 aa26.47■■□□□ 1.83
KRT18P55-201ENST00000577198 KSR2Q6VAB6 950 aa26.47■■□□□ 1.83
KRT18P55-201ENST00000577198 MAP3K2Q9Y2U5 619 aa26.47■■□□□ 1.83
KRT18P55-201ENST00000577198 CABP4P57796 275 aa26.46■■□□□ 1.83
KRT18P55-201ENST00000577198 MFAP1P55081 439 aaKnown RBP26.46■■□□□ 1.83
KRT18P55-201ENST00000577198 UPF2Q9HAU5 1272 aaKnown RBP26.46■■□□□ 1.83
KRT18P55-201ENST00000577198 EXOC6BQ9Y2D4 811 aa26.46■■□□□ 1.83
KRT18P55-201ENST00000577198 NKX1-1Q15270 411 aaPredicted RBP26.45■■□□□ 1.82
KRT18P55-201ENST00000577198 USP16Q9Y5T5 823 aa26.45■■□□□ 1.82
KRT18P55-201ENST00000577198 COL22A1Q8NFW1 1626 aaPredicted RBP26.45■■□□□ 1.82
KRT18P55-201ENST00000577198 LRP10Q7Z4F1 713 aa26.44■■□□□ 1.82
KRT18P55-201ENST00000577198 EVA1CP58658 441 aa26.44■■□□□ 1.82
KRT18P55-201ENST00000577198 TTC22Q5TAA0 569 aa26.43■■□□□ 1.82
KRT18P55-201ENST00000577198 SSH3Q8TE77 659 aa26.43■■□□□ 1.82
KRT18P55-201ENST00000577198 BCL11AQ9H165 835 aa26.43■■□□□ 1.82
KRT18P55-201ENST00000577198 UBR2Q8IWV8 1755 aa26.43■■□□□ 1.82
KRT18P55-201ENST00000577198 COL16A1Q07092 1604 aaPredicted RBP26.43■■□□□ 1.82
KRT18P55-201ENST00000577198 TTC5Q8N0Z6 440 aa26.42■■□□□ 1.82
KRT18P55-201ENST00000577198 IBTKQ9P2D0 1353 aaPredicted RBP26.42■■□□□ 1.82
KRT18P55-201ENST00000577198 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
KRT18P55-201ENST00000577198 FMNL2Q96PY5 1086 aa26.42■■□□□ 1.82
KRT18P55-201ENST00000577198 BTG4Q9NY30 223 aa26.42■■□□□ 1.82
KRT18P55-201ENST00000577198 POLA2Q14181 598 aa26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 TBC1D9Q6ZT07 1266 aa26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 PAPPAQ13219 1627 aa26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 LAMB4A4D0S4 1761 aa26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 COL14A1Q05707 1796 aaKnown RBP26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
KRT18P55-201ENST00000577198 C22orf23Q9BZE7 217 aa26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 ERVV-2B6SEH9 535 aa26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 ALDH1L1O75891 902 aa26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 AIMP1Q12904 312 aaKnown RBP26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 CWF19L2Q2TBE0 894 aaKnown RBP26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 PPP1R42Q7Z4L9 355 aa26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 SALL3Q9BXA9 1300 aa26.4■■□□□ 1.82
KRT18P55-201ENST00000577198 MYL6BP14649 208 aa26.38■■□□□ 1.81
KRT18P55-201ENST00000577198 DDX54Q8TDD1 881 aaKnown RBP26.38■■□□□ 1.81
KRT18P55-201ENST00000577198 KCPQ6ZWJ8 1503 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 MYT1Q01538 1121 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 USP35Q9P2H5 1018 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 TUBGCP6Q96RT7 1819 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 PIP4K2AP48426 406 aaPredicted RBP26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 XAGE3Q8WTP9 111 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 LRRCC1Q9C099 1032 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 OSBPL3Q9H4L5 887 aa26.37■■□□□ 1.81
KRT18P55-201ENST00000577198 LINS1Q8NG48 757 aa26.36■■□□□ 1.81
KRT18P55-201ENST00000577198 DDX58O95786 925 aaKnown RBP26.35■■□□□ 1.81
KRT18P55-201ENST00000577198 IGKV5-2P06315 115 aa26.35■■□□□ 1.81
KRT18P55-201ENST00000577198 COPS6Q7L5N1 327 aa26.35■■□□□ 1.81
KRT18P55-201ENST00000577198 PDE1AP54750 535 aa26.35■■□□□ 1.81
KRT18P55-201ENST00000577198 DISP2A7MBM2 1401 aa26.34■■□□□ 1.81
KRT18P55-201ENST00000577198 CDC45O75419 566 aa26.34■■□□□ 1.81
KRT18P55-201ENST00000577198 UTYO14607 1347 aa26.33■■□□□ 1.81
KRT18P55-201ENST00000577198 SRGAP3O43295 1099 aa26.33■■□□□ 1.81
KRT18P55-201ENST00000577198 SDSP20132 328 aa26.33■■□□□ 1.8
KRT18P55-201ENST00000577198 RBM25P49756 843 aaKnown RBP26.33■■□□□ 1.8
KRT18P55-201ENST00000577198 MTX1Q13505 466 aa26.33■■□□□ 1.8
KRT18P55-201ENST00000577198 TNS2Q63HR2 1409 aa26.32■■□□□ 1.8
KRT18P55-201ENST00000577198 KAZALD1Q96I82 304 aa26.32■■□□□ 1.8
KRT18P55-201ENST00000577198 RIC3Q7Z5B4 369 aa26.31■■□□□ 1.8
KRT18P55-201ENST00000577198 C9orf78Q9NZ63 289 aaPredicted RBP26.31■■□□□ 1.8
KRT18P55-201ENST00000577198 ARFGEF2Q9Y6D5 1785 aa26.3■■□□□ 1.8
KRT18P55-201ENST00000577198 GRM8O00222 908 aa26.3■■□□□ 1.8
KRT18P55-201ENST00000577198 DAXXQ9UER7 740 aaPredicted RBP26.3■■□□□ 1.8
KRT18P55-201ENST00000577198 PHLPP1O60346 1717 aa26.3■■□□□ 1.8
KRT18P55-201ENST00000577198 NBPF26B4DH59 902 aa26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 NBPF14Q5TI25 921 aa26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 TSHZ3Q63HK5 1081 aa26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 NBPF10Q6P3W6 841 aaKnown RBP26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 NBPF15Q8N660 670 aa26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 METTL22Q9BUU2 404 aaPredicted RBP26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 PLCH1Q4KWH8 1693 aa26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 SURF6O75683 361 aaKnown RBP26.29■■□□□ 1.8
KRT18P55-201ENST00000577198 NEURL1BA8MQ27 555 aa26.28■■□□□ 1.8
KRT18P55-201ENST00000577198 ANKRD13DQ6ZTN6 518 aa26.28■■□□□ 1.8
KRT18P55-201ENST00000577198 SUCLG2Q96I99 432 aa26.28■■□□□ 1.8
KRT18P55-201ENST00000577198 TBC1D2Q9BYX2 928 aa26.28■■□□□ 1.8
KRT18P55-201ENST00000577198 RAB11FIP3O75154 756 aa26.27■■□□□ 1.8
KRT18P55-201ENST00000577198 ITGB4P16144 1822 aa26.27■■□□□ 1.8
KRT18P55-201ENST00000577198 WNK3Q9BYP7 1800 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 MX1P20591 662 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 MYD88Q99836 296 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 IL1RAPL2Q9NP60 686 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 STAP2Q9UGK3 403 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 RHPN1Q8TCX5 695 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 KIF2CQ99661 725 aa26.26■■□□□ 1.79
KRT18P55-201ENST00000577198 AFDNP55196 1824 aaKnown RBP26.25■■□□□ 1.79
KRT18P55-201ENST00000577198 BECN1Q14457 450 aa26.25■■□□□ 1.79
KRT18P55-201ENST00000577198 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
KRT18P55-201ENST00000577198 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
KRT18P55-201ENST00000577198 GCKRQ14397 625 aa26.24■■□□□ 1.79
KRT18P55-201ENST00000577198 NBR1Q14596 966 aa26.24■■□□□ 1.79
KRT18P55-201ENST00000577198 BICC1Q9H694 974 aaKnown RBP26.24■■□□□ 1.79
KRT18P55-201ENST00000577198 NRAPQ86VF7 1730 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms