RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
ATP2A3-215ENST00000576957 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
ATP2A3-215ENST00000576957 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
ATP2A3-215ENST00000576957 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
ATP2A3-215ENST00000576957 DALRD3Q5D0E6 543 aaKnown RBP17.78■□□□□ 0.44
ATP2A3-215ENST00000576957 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
ATP2A3-215ENST00000576957 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
ATP2A3-215ENST00000576957 COL15A1P39059 1388 aa17.76■□□□□ 0.43
ATP2A3-215ENST00000576957 TOMM70O94826 608 aa17.75■□□□□ 0.43
ATP2A3-215ENST00000576957 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
ATP2A3-215ENST00000576957 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
ATP2A3-215ENST00000576957 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
ATP2A3-215ENST00000576957 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
ATP2A3-215ENST00000576957 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
ATP2A3-215ENST00000576957 STARD3NLO95772 234 aa17.74■□□□□ 0.43
ATP2A3-215ENST00000576957 NFIXQ14938 502 aa17.74■□□□□ 0.43
ATP2A3-215ENST00000576957 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
ATP2A3-215ENST00000576957 GNAT3A8MTJ3 354 aa17.73■□□□□ 0.43
ATP2A3-215ENST00000576957 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
ATP2A3-215ENST00000576957 CHRNA5P30532 468 aa17.73■□□□□ 0.43
ATP2A3-215ENST00000576957 TEFQ10587 303 aa17.73■□□□□ 0.43
ATP2A3-215ENST00000576957 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
ATP2A3-215ENST00000576957 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
ATP2A3-215ENST00000576957 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
ATP2A3-215ENST00000576957 A0A087WZG4 1122 aa17.71■□□□□ 0.43
ATP2A3-215ENST00000576957 SERPINB2P05120 415 aa17.71■□□□□ 0.43
ATP2A3-215ENST00000576957 EIF5P55010 431 aaKnown RBP17.71■□□□□ 0.43
ATP2A3-215ENST00000576957 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
ATP2A3-215ENST00000576957 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
ATP2A3-215ENST00000576957 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
ATP2A3-215ENST00000576957 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
ATP2A3-215ENST00000576957 APLP1P51693 650 aa17.7■□□□□ 0.42
ATP2A3-215ENST00000576957 NMRK2Q9NPI5 230 aa17.7■□□□□ 0.42
ATP2A3-215ENST00000576957 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
ATP2A3-215ENST00000576957 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
ATP2A3-215ENST00000576957 ZNF496Q96IT1 587 aaPredicted RBP17.69■□□□□ 0.42
ATP2A3-215ENST00000576957 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
ATP2A3-215ENST00000576957 RBM46Q8TBY0 533 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-215ENST00000576957 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
ATP2A3-215ENST00000576957 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-215ENST00000576957 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-215ENST00000576957 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 SBF1O95248 1867 aa17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 IL6STP40189 918 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
ATP2A3-215ENST00000576957 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
ATP2A3-215ENST00000576957 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
ATP2A3-215ENST00000576957 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
ATP2A3-215ENST00000576957 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
ATP2A3-215ENST00000576957 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
ATP2A3-215ENST00000576957 H0YIN7 160 aa17.65■□□□□ 0.42
ATP2A3-215ENST00000576957 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
ATP2A3-215ENST00000576957 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
ATP2A3-215ENST00000576957 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
ATP2A3-215ENST00000576957 LMNB1P20700 586 aa17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 FSTL1Q12841 308 aa17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
ATP2A3-215ENST00000576957 BTBD11A6QL63 1104 aa17.63■□□□□ 0.41
ATP2A3-215ENST00000576957 TBC1D9BQ66K14 1250 aa17.63■□□□□ 0.41
ATP2A3-215ENST00000576957 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
ATP2A3-215ENST00000576957 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
ATP2A3-215ENST00000576957 TNRC6CQ9HCJ0 1690 aaKnown RBP17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 PDE6BP35913 854 aa17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 DNAJC5GQ8N7S2 189 aa17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 RRAGCQ9HB90 399 aa17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
ATP2A3-215ENST00000576957 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
ATP2A3-215ENST00000576957 A1BGP04217 495 aa17.61■□□□□ 0.41
ATP2A3-215ENST00000576957 RASSF7Q02833 373 aa17.61■□□□□ 0.41
ATP2A3-215ENST00000576957 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-215ENST00000576957 RTF1Q92541 710 aaKnown RBP17.6■□□□□ 0.41
ATP2A3-215ENST00000576957 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 CAMTA2O94983 1202 aa17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
ATP2A3-215ENST00000576957 KCNQ3O43525 872 aa17.58■□□□□ 0.4
ATP2A3-215ENST00000576957 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
ATP2A3-215ENST00000576957 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.4
ATP2A3-215ENST00000576957 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.4
ATP2A3-215ENST00000576957 NFKBIEO00221 500 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 ANP32CO43423 234 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 PRELPP51888 382 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 CLEC4GQ6UXB4 293 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 SMC1BQ8NDV3 1235 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 WDR90Q96KV7 1748 aa17.57■□□□□ 0.4
ATP2A3-215ENST00000576957 ST5P78524 1137 aa17.56■□□□□ 0.4
ATP2A3-215ENST00000576957 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms