RNA–Protein interactions for RNA: ENST00000576788.1

TRAP1-217, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-217ENST00000576788 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
TRAP1-217ENST00000576788 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
TRAP1-217ENST00000576788 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
TRAP1-217ENST00000576788 FMNL2Q96PY5 1086 aa12.96□□□□□ -0.33
TRAP1-217ENST00000576788 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
TRAP1-217ENST00000576788 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
TRAP1-217ENST00000576788 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
TRAP1-217ENST00000576788 COL15A1P39059 1388 aa12.95□□□□□ -0.34
TRAP1-217ENST00000576788 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
TRAP1-217ENST00000576788 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
TRAP1-217ENST00000576788 FKBP8Q14318 412 aa12.95□□□□□ -0.34
TRAP1-217ENST00000576788 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
TRAP1-217ENST00000576788 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
TRAP1-217ENST00000576788 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
TRAP1-217ENST00000576788 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
TRAP1-217ENST00000576788 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
TRAP1-217ENST00000576788 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
TRAP1-217ENST00000576788 A0A087WZG4 1122 aa12.93□□□□□ -0.34
TRAP1-217ENST00000576788 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
TRAP1-217ENST00000576788 A0A0G2JLW4 131 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 KCNQ3O43525 872 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
TRAP1-217ENST00000576788 TGFB2P61812 414 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
TRAP1-217ENST00000576788 C10orf71Q711Q0 1435 aa12.91□□□□□ -0.34
TRAP1-217ENST00000576788 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
TRAP1-217ENST00000576788 NPHP1O15259 732 aa12.91□□□□□ -0.34
TRAP1-217ENST00000576788 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
TRAP1-217ENST00000576788 DPEP1P16444 411 aa12.9□□□□□ -0.34
TRAP1-217ENST00000576788 DDR1Q08345 913 aa12.9□□□□□ -0.34
TRAP1-217ENST00000576788 WDR43Q15061 677 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAP1-217ENST00000576788 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
TRAP1-217ENST00000576788 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
TRAP1-217ENST00000576788 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
TRAP1-217ENST00000576788 KIAA1551Q9HCM1 1747 aa12.89□□□□□ -0.35
TRAP1-217ENST00000576788 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
TRAP1-217ENST00000576788 A1BGP04217 495 aa12.89□□□□□ -0.35
TRAP1-217ENST00000576788 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
TRAP1-217ENST00000576788 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
TRAP1-217ENST00000576788 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
TRAP1-217ENST00000576788 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
TRAP1-217ENST00000576788 EIF5P55010 431 aaKnown RBP12.88□□□□□ -0.35
TRAP1-217ENST00000576788 NFIXQ14938 502 aa12.88□□□□□ -0.35
TRAP1-217ENST00000576788 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
TRAP1-217ENST00000576788 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
TRAP1-217ENST00000576788 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
TRAP1-217ENST00000576788 LAMB4A4D0S4 1761 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 SERPINB2P05120 415 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 TM4SF1P30408 202 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 IL6STP40189 918 aaPredicted RBP12.87□□□□□ -0.35
TRAP1-217ENST00000576788 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
TRAP1-217ENST00000576788 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
TRAP1-217ENST00000576788 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
TRAP1-217ENST00000576788 RIPK4P57078 832 aa12.86□□□□□ -0.35
TRAP1-217ENST00000576788 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
TRAP1-217ENST00000576788 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
TRAP1-217ENST00000576788 ARFGEF1Q9Y6D6 1849 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
TRAP1-217ENST00000576788 CHRNA5P30532 468 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
TRAP1-217ENST00000576788 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
TRAP1-217ENST00000576788 ANP32CO43423 234 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
TRAP1-217ENST00000576788 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 SETDB2Q96T68 719 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 TSPYL4Q9UJ04 414 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
TRAP1-217ENST00000576788 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
TRAP1-217ENST00000576788 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
TRAP1-217ENST00000576788 CACNA1SQ13698 1873 aa12.83□□□□□ -0.36
TRAP1-217ENST00000576788 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
TRAP1-217ENST00000576788 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
TRAP1-217ENST00000576788 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
TRAP1-217ENST00000576788 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
TRAP1-217ENST00000576788 H0YIN7 160 aa12.82□□□□□ -0.36
TRAP1-217ENST00000576788 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
TRAP1-217ENST00000576788 ST5P78524 1137 aa12.82□□□□□ -0.36
TRAP1-217ENST00000576788 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
TRAP1-217ENST00000576788 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
TRAP1-217ENST00000576788 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
TRAP1-217ENST00000576788 MYL6BP14649 208 aa12.81□□□□□ -0.36
TRAP1-217ENST00000576788 KCNA3P22001 575 aa12.81□□□□□ -0.36
TRAP1-217ENST00000576788 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAP1-217ENST00000576788 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
TRAP1-217ENST00000576788 PDE6BP35913 854 aa12.8□□□□□ -0.36
TRAP1-217ENST00000576788 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
TRAP1-217ENST00000576788 CCDC184Q52MB2 194 aa12.8□□□□□ -0.36
TRAP1-217ENST00000576788 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms