RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
LCMT1-212ENST00000576625 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
LCMT1-212ENST00000576625 LMNB1P20700 586 aa11.96□□□□□ -0.49
LCMT1-212ENST00000576625 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
LCMT1-212ENST00000576625 TIAM2Q8IVF5 1701 aa11.96□□□□□ -0.49
LCMT1-212ENST00000576625 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
LCMT1-212ENST00000576625 CLCN6P51797 869 aa11.95□□□□□ -0.5
LCMT1-212ENST00000576625 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
LCMT1-212ENST00000576625 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
LCMT1-212ENST00000576625 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
LCMT1-212ENST00000576625 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
LCMT1-212ENST00000576625 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
LCMT1-212ENST00000576625 CHRNA5P30532 468 aa11.94□□□□□ -0.5
LCMT1-212ENST00000576625 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
LCMT1-212ENST00000576625 TRAPPC3LQ5T215 181 aa11.94□□□□□ -0.5
LCMT1-212ENST00000576625 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
LCMT1-212ENST00000576625 KDRP35968 1356 aa11.93□□□□□ -0.5
LCMT1-212ENST00000576625 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
LCMT1-212ENST00000576625 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
LCMT1-212ENST00000576625 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
LCMT1-212ENST00000576625 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
LCMT1-212ENST00000576625 DDR1Q08345 913 aa11.92□□□□□ -0.5
LCMT1-212ENST00000576625 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
LCMT1-212ENST00000576625 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
LCMT1-212ENST00000576625 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
LCMT1-212ENST00000576625 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 MAP3K13O43283 966 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 FBLN1P23142 703 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
LCMT1-212ENST00000576625 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
LCMT1-212ENST00000576625 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
LCMT1-212ENST00000576625 NFKBIEO00221 500 aa11.9□□□□□ -0.5
LCMT1-212ENST00000576625 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
LCMT1-212ENST00000576625 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
LCMT1-212ENST00000576625 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
LCMT1-212ENST00000576625 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
LCMT1-212ENST00000576625 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
LCMT1-212ENST00000576625 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
LCMT1-212ENST00000576625 AMPHP49418 695 aa11.89□□□□□ -0.51
LCMT1-212ENST00000576625 MAP2K1Q02750 393 aaPredicted RBP11.89□□□□□ -0.51
LCMT1-212ENST00000576625 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
LCMT1-212ENST00000576625 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
LCMT1-212ENST00000576625 CNTNAP4Q9C0A0 1308 aa11.88□□□□□ -0.51
LCMT1-212ENST00000576625 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
LCMT1-212ENST00000576625 A0A1W2PP64 1363 aa11.88□□□□□ -0.51
LCMT1-212ENST00000576625 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
LCMT1-212ENST00000576625 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
LCMT1-212ENST00000576625 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
LCMT1-212ENST00000576625 SMG6Q86US8 1419 aaKnown RBP11.87□□□□□ -0.51
LCMT1-212ENST00000576625 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
LCMT1-212ENST00000576625 RFC4P35249 363 aa11.87□□□□□ -0.51
LCMT1-212ENST00000576625 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
LCMT1-212ENST00000576625 SLC12A5Q9H2X9 1139 aa11.87□□□□□ -0.51
LCMT1-212ENST00000576625 TM4SF1P30408 202 aa11.86□□□□□ -0.51
LCMT1-212ENST00000576625 EVX2Q03828 476 aa11.86□□□□□ -0.51
LCMT1-212ENST00000576625 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
LCMT1-212ENST00000576625 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
LCMT1-212ENST00000576625 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
LCMT1-212ENST00000576625 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
LCMT1-212ENST00000576625 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
LCMT1-212ENST00000576625 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
LCMT1-212ENST00000576625 MCOLN1Q9GZU1 580 aa11.85□□□□□ -0.51
LCMT1-212ENST00000576625 SRP68Q9UHB9 627 aaKnown RBP11.85□□□□□ -0.51
LCMT1-212ENST00000576625 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
LCMT1-212ENST00000576625 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
LCMT1-212ENST00000576625 NRXN2Q9P2S2 1712 aa11.84□□□□□ -0.51
LCMT1-212ENST00000576625 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
LCMT1-212ENST00000576625 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
LCMT1-212ENST00000576625 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
LCMT1-212ENST00000576625 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 INSRP06213 1382 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
LCMT1-212ENST00000576625 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
LCMT1-212ENST00000576625 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 COG3Q96JB2 828 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
LCMT1-212ENST00000576625 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
LCMT1-212ENST00000576625 SCN4AP35499 1836 aa11.82□□□□□ -0.52
LCMT1-212ENST00000576625 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
LCMT1-212ENST00000576625 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
LCMT1-212ENST00000576625 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
LCMT1-212ENST00000576625 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
LCMT1-212ENST00000576625 TMC1Q8TDI8 760 aa11.81□□□□□ -0.52
LCMT1-212ENST00000576625 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
LCMT1-212ENST00000576625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.8□□□□□ -0.52
LCMT1-212ENST00000576625 IQCA1LA6NCM1 817 aa11.8□□□□□ -0.52
LCMT1-212ENST00000576625 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
LCMT1-212ENST00000576625 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
LCMT1-212ENST00000576625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■■□□□ 13.3
LCMT1-212ENST00000576625 STK25O00506 426 aa11.79□□□□□ -0.52
LCMT1-212ENST00000576625 PSEN1P49768 467 aa11.79□□□□□ -0.52
LCMT1-212ENST00000576625 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
LCMT1-212ENST00000576625 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
LCMT1-212ENST00000576625 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
LCMT1-212ENST00000576625 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms