RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TM4SF1P30408 202 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 VEGFBP49765 207 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 LDHDQ86WU2 507 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 C2CD5Q86YS7 1000 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 WBP1LQ9NX94 342 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 PASKQ96RG2 1323 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 KIF20BQ96Q89 1820 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 POTEIP0CG38 1075 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 POTEJP0CG39 1038 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 HSPA8P11142 646 aaKnown RBP8.18□□□□□ -1.1
SMG6-219ENST00000575663 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 TAOK3Q9H2K8 898 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
SMG6-219ENST00000575663 SBF1O95248 1867 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 SERPINB2P05120 415 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 PLEKHO1Q53GL0 409 aaPredicted RBP8.17□□□□□ -1.1
SMG6-219ENST00000575663 C1orf141Q5JVX7 400 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 ZNF530Q6P9A1 599 aaPredicted RBP8.17□□□□□ -1.1
SMG6-219ENST00000575663 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 COL15A1P39059 1388 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 ANKRD26Q9UPS8 1709 aa8.17□□□□□ -1.1
SMG6-219ENST00000575663 RASSF10A6NK89 507 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 DDNO94850 711 aaPredicted RBP8.16□□□□□ -1.1
SMG6-219ENST00000575663 PDE6BP35913 854 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 RGS19P49795 217 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 MTHFSP49914 203 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
SMG6-219ENST00000575663 NFIXQ14938 502 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 DEFB115Q30KQ5 88 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 AMOTQ4VCS5 1084 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 ZNF622Q969S3 477 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG6-219ENST00000575663 CFAP44Q96MT7 982 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
SMG6-219ENST00000575663 DLEC1Q9Y238 1755 aa8.15□□□□□ -1.1
SMG6-219ENST00000575663 CARMIL3Q8ND23 1372 aa8.15□□□□□ -1.1
SMG6-219ENST00000575663 C21orf2O43822 256 aa8.15□□□□□ -1.1
SMG6-219ENST00000575663 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 EAPPQ56P03 285 aaPredicted RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 TAF1DQ9H5J8 278 aaPredicted RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 ZNF219Q9P2Y4 722 aaPredicted RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.1
SMG6-219ENST00000575663 WDR33Q9C0J8 1336 aaKnown RBP8.14□□□□□ -1.11
SMG6-219ENST00000575663 PNMA8AQ86V59 439 aaPredicted RBP8.14□□□□□ -1.11
SMG6-219ENST00000575663 HACL1Q9UJ83 578 aa8.14□□□□□ -1.11
SMG6-219ENST00000575663 CLEC11AQ9Y240 323 aa8.14□□□□□ -1.11
SMG6-219ENST00000575663 TJP1Q07157 1748 aa8.14□□□□□ -1.11
SMG6-219ENST00000575663 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
SMG6-219ENST00000575663 NPHP1O15259 732 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 ECE1P42892 770 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
SMG6-219ENST00000575663 DNAJC10Q8IXB1 793 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 NFATC2IPQ8NCF5 419 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 CNKSR1Q969H4 720 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 POLKQ9UBT6 870 aa8.13□□□□□ -1.11
SMG6-219ENST00000575663 ADAMTS7Q9UKP4 1686 aa8.12□□□□□ -1.11
SMG6-219ENST00000575663 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
SMG6-219ENST00000575663 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
SMG6-219ENST00000575663 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
SMG6-219ENST00000575663 ZBTB1Q9Y2K1 713 aa8.12□□□□□ -1.11
SMG6-219ENST00000575663 MYH14Q7Z406 1995 aaKnown RBP8.11□□□□□ -1.11
SMG6-219ENST00000575663 A0A087WZG4 1122 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 CA12O43570 354 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
SMG6-219ENST00000575663 EPHX2P34913 555 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 ST5P78524 1137 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 CCDC93Q567U6 631 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
SMG6-219ENST00000575663 CNTROBQ8N137 903 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 THSD7BQ9C0I4 1608 aa8.11□□□□□ -1.11
SMG6-219ENST00000575663 RNF123Q5XPI4 1314 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 GRM1Q13255 1194 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
SMG6-219ENST00000575663 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 PRR5LQ6MZQ0 368 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
SMG6-219ENST00000575663 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 CAPNS2Q96L46 248 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
SMG6-219ENST00000575663 DDX21Q9NR30 783 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMG6-219ENST00000575663 VIRMAQ69YN4 1812 aaKnown RBP8.1□□□□□ -1.11
SMG6-219ENST00000575663 ZNF541Q9H0D2 1346 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 MRC1P22897 1456 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 SCN4AP35499 1836 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 AFDNP55196 1824 aaKnown RBP8.09□□□□□ -1.11
SMG6-219ENST00000575663 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
SMG6-219ENST00000575663 TNNT2P45379 298 aaPredicted RBP8.09□□□□□ -1.11
SMG6-219ENST00000575663 FKBP4Q02790 459 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG6-219ENST00000575663 AKAP4Q5JQC9 854 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 MASTLQ96GX5 879 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 GPR101Q96P66 508 aaPredicted RBP8.09□□□□□ -1.11
SMG6-219ENST00000575663 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms