RNA–Protein interactions for RNA: ENST00000574953.5

RPH3AL-215, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 5

Gene RPH3AL, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-215ENST00000574953 RIPK4P57078 832 aa20.62■□□□□ 0.89
RPH3AL-215ENST00000574953 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
RPH3AL-215ENST00000574953 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
RPH3AL-215ENST00000574953 TAF7Q15545 349 aaPredicted RBP20.61■□□□□ 0.89
RPH3AL-215ENST00000574953 ADCY9O60503 1353 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 RPS6KA4O75676 772 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 ADAMTS8Q9UP79 889 aa20.6■□□□□ 0.89
RPH3AL-215ENST00000574953 MYH14Q7Z406 1995 aaKnown RBP20.59■□□□□ 0.89
RPH3AL-215ENST00000574953 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
RPH3AL-215ENST00000574953 ZNF496Q96IT1 587 aaPredicted RBP20.59■□□□□ 0.89
RPH3AL-215ENST00000574953 MRS2Q9HD23 443 aa20.59■□□□□ 0.89
RPH3AL-215ENST00000574953 AMIGO3Q86WK7 504 aa20.57■□□□□ 0.88
RPH3AL-215ENST00000574953 C4AP0C0L4 1744 aa20.56■□□□□ 0.88
RPH3AL-215ENST00000574953 CYP19A1P11511 503 aaPredicted RBP20.56■□□□□ 0.88
RPH3AL-215ENST00000574953 RRP7AQ9Y3A4 280 aaKnown RBP20.56■□□□□ 0.88
RPH3AL-215ENST00000574953 ZPR1O75312 459 aa20.55■□□□□ 0.88
RPH3AL-215ENST00000574953 SMIM5Q71RC9 77 aa20.55■□□□□ 0.88
RPH3AL-215ENST00000574953 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
RPH3AL-215ENST00000574953 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 NLGN1Q8N2Q7 840 aa20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 ZNF330Q9Y3S2 320 aaPredicted RBP20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 CD2APQ9Y5K6 639 aa20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
RPH3AL-215ENST00000574953 A0A087WZG4 1122 aa20.53■□□□□ 0.88
RPH3AL-215ENST00000574953 INTS5Q6P9B9 1019 aaKnown RBP20.53■□□□□ 0.88
RPH3AL-215ENST00000574953 TSPYL4Q9UJ04 414 aa20.53■□□□□ 0.88
RPH3AL-215ENST00000574953 WWC3Q9ULE0 1092 aa20.53■□□□□ 0.88
RPH3AL-215ENST00000574953 COL15A1P39059 1388 aa20.52■□□□□ 0.88
RPH3AL-215ENST00000574953 KCNQ3O43525 872 aa20.52■□□□□ 0.88
RPH3AL-215ENST00000574953 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
RPH3AL-215ENST00000574953 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
RPH3AL-215ENST00000574953 ZBTB1Q9Y2K1 713 aa20.52■□□□□ 0.88
RPH3AL-215ENST00000574953 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
RPH3AL-215ENST00000574953 KIAA1551Q9HCM1 1747 aa20.51■□□□□ 0.87
RPH3AL-215ENST00000574953 GPBP1L1Q9HC44 474 aaPredicted RBP20.51■□□□□ 0.87
RPH3AL-215ENST00000574953 SOS1Q07889 1333 aaPredicted RBP20.51■□□□□ 0.87
RPH3AL-215ENST00000574953 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
RPH3AL-215ENST00000574953 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
RPH3AL-215ENST00000574953 BABAM1Q9NWV8 329 aa20.49■□□□□ 0.87
RPH3AL-215ENST00000574953 PARP3Q9Y6F1 533 aa20.49■□□□□ 0.87
RPH3AL-215ENST00000574953 USP42Q9H9J4 1324 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-215ENST00000574953 APAF1O14727 1248 aa20.48■□□□□ 0.87
RPH3AL-215ENST00000574953 MMP10P09238 476 aa20.48■□□□□ 0.87
RPH3AL-215ENST00000574953 GYS1P13807 737 aa20.47■□□□□ 0.87
RPH3AL-215ENST00000574953 HSPA6P17066 643 aa20.47■□□□□ 0.87
RPH3AL-215ENST00000574953 IL6STP40189 918 aaPredicted RBP20.47■□□□□ 0.87
RPH3AL-215ENST00000574953 KIF13BQ9NQT8 1826 aa20.47■□□□□ 0.87
RPH3AL-215ENST00000574953 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
RPH3AL-215ENST00000574953 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
RPH3AL-215ENST00000574953 NARFQ9UHQ1 456 aa20.46■□□□□ 0.87
RPH3AL-215ENST00000574953 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
RPH3AL-215ENST00000574953 USPL1Q5W0Q7 1092 aa20.45■□□□□ 0.86
RPH3AL-215ENST00000574953 A1BGP04217 495 aa20.44■□□□□ 0.86
RPH3AL-215ENST00000574953 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
RPH3AL-215ENST00000574953 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
RPH3AL-215ENST00000574953 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
RPH3AL-215ENST00000574953 TRIM35Q9UPQ4 493 aa20.43■□□□□ 0.86
RPH3AL-215ENST00000574953 PRAMEF22A3QJZ6 481 aa20.42■□□□□ 0.86
RPH3AL-215ENST00000574953 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
RPH3AL-215ENST00000574953 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
RPH3AL-215ENST00000574953 KIF3CO14782 793 aa20.41■□□□□ 0.86
RPH3AL-215ENST00000574953 FKBP8Q14318 412 aa20.41■□□□□ 0.86
RPH3AL-215ENST00000574953 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
RPH3AL-215ENST00000574953 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
RPH3AL-215ENST00000574953 NPHP1O15259 732 aa20.4■□□□□ 0.86
RPH3AL-215ENST00000574953 GNAI1P63096 354 aa20.4■□□□□ 0.86
RPH3AL-215ENST00000574953 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
RPH3AL-215ENST00000574953 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
RPH3AL-215ENST00000574953 PXDNLA1KZ92 1463 aa20.39■□□□□ 0.85
RPH3AL-215ENST00000574953 PIP4K2AP48426 406 aaPredicted RBP20.39■□□□□ 0.85
RPH3AL-215ENST00000574953 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
RPH3AL-215ENST00000574953 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
RPH3AL-215ENST00000574953 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
RPH3AL-215ENST00000574953 BCORQ6W2J9 1755 aa20.38■□□□□ 0.85
RPH3AL-215ENST00000574953 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
RPH3AL-215ENST00000574953 CHL1O00533 1208 aa20.37■□□□□ 0.85
RPH3AL-215ENST00000574953 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
RPH3AL-215ENST00000574953 IFT57Q9NWB7 429 aa20.37■□□□□ 0.85
RPH3AL-215ENST00000574953 MYL6BP14649 208 aa20.36■□□□□ 0.85
RPH3AL-215ENST00000574953 NGEFQ8N5V2 710 aa20.36■□□□□ 0.85
RPH3AL-215ENST00000574953 NFIXQ14938 502 aa20.34■□□□□ 0.85
RPH3AL-215ENST00000574953 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
RPH3AL-215ENST00000574953 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
RPH3AL-215ENST00000574953 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
RPH3AL-215ENST00000574953 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
RPH3AL-215ENST00000574953 AFDNP55196 1824 aaKnown RBP20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 POLRMTO00411 1230 aaKnown RBP20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 TGFB2P61812 414 aa20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 DDR1Q08345 913 aa20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
RPH3AL-215ENST00000574953 WDR90Q96KV7 1748 aa20.33■□□□□ 0.84
RPH3AL-215ENST00000574953 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
RPH3AL-215ENST00000574953 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms