RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
NCBP3-203ENST00000574379 GRM1Q13255 1194 aa13.54□□□□□ -0.24
NCBP3-203ENST00000574379 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
NCBP3-203ENST00000574379 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
NCBP3-203ENST00000574379 TNRC18O15417 2968 aaPredicted RBP13.53□□□□□ -0.24
NCBP3-203ENST00000574379 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 TMEM88BA6NKF7 163 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 SIK1P57059 783 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
NCBP3-203ENST00000574379 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
NCBP3-203ENST00000574379 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
NCBP3-203ENST00000574379 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
NCBP3-203ENST00000574379 POTECB2RU33 542 aa13.52□□□□□ -0.25
NCBP3-203ENST00000574379 RFC4P35249 363 aa13.52□□□□□ -0.25
NCBP3-203ENST00000574379 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
NCBP3-203ENST00000574379 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
NCBP3-203ENST00000574379 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
NCBP3-203ENST00000574379 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
NCBP3-203ENST00000574379 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
NCBP3-203ENST00000574379 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
NCBP3-203ENST00000574379 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
NCBP3-203ENST00000574379 ITPK1Q13572 414 aa13.5□□□□□ -0.25
NCBP3-203ENST00000574379 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
NCBP3-203ENST00000574379 MCOLN1Q9GZU1 580 aa13.5□□□□□ -0.25
NCBP3-203ENST00000574379 ABT1Q9ULW3 272 aaKnown RBP13.5□□□□□ -0.25
NCBP3-203ENST00000574379 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
NCBP3-203ENST00000574379 ITGB4P16144 1822 aa13.49□□□□□ -0.25
NCBP3-203ENST00000574379 PIGBQ92521 554 aa13.49□□□□□ -0.25
NCBP3-203ENST00000574379 ARHGEF1Q92888 912 aaKnown RBP13.49□□□□□ -0.25
NCBP3-203ENST00000574379 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
NCBP3-203ENST00000574379 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
NCBP3-203ENST00000574379 GYS1P13807 737 aa13.48□□□□□ -0.25
NCBP3-203ENST00000574379 PRPF38BQ5VTL8 546 aaKnown RBP13.48□□□□□ -0.25
NCBP3-203ENST00000574379 EYA1Q99502 592 aa13.48□□□□□ -0.25
NCBP3-203ENST00000574379 MTHFSP49914 203 aa13.47□□□□□ -0.25
NCBP3-203ENST00000574379 SOX10P56693 466 aa13.47□□□□□ -0.25
NCBP3-203ENST00000574379 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
NCBP3-203ENST00000574379 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
NCBP3-203ENST00000574379 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
NCBP3-203ENST00000574379 DGKZQ13574 1117 aa13.46□□□□□ -0.25
NCBP3-203ENST00000574379 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
NCBP3-203ENST00000574379 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
NCBP3-203ENST00000574379 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.26
NCBP3-203ENST00000574379 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
NCBP3-203ENST00000574379 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
NCBP3-203ENST00000574379 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
NCBP3-203ENST00000574379 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
NCBP3-203ENST00000574379 IL13P35225 146 aa13.44□□□□□ -0.26
NCBP3-203ENST00000574379 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
NCBP3-203ENST00000574379 ASAP1Q9ULH1 1129 aa13.44□□□□□ -0.26
NCBP3-203ENST00000574379 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
NCBP3-203ENST00000574379 PDE4DIPQ5VU43 2346 aa13.43□□□□□ -0.26
NCBP3-203ENST00000574379 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
NCBP3-203ENST00000574379 CYP27B1O15528 508 aa13.42□□□□□ -0.26
NCBP3-203ENST00000574379 PPP2R1AP30153 589 aa13.42□□□□□ -0.26
NCBP3-203ENST00000574379 SRP68Q9UHB9 627 aaKnown RBP13.42□□□□□ -0.26
NCBP3-203ENST00000574379 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
NCBP3-203ENST00000574379 KDRP35968 1356 aa13.42□□□□□ -0.26
NCBP3-203ENST00000574379 NFKBIEO00221 500 aa13.41□□□□□ -0.26
NCBP3-203ENST00000574379 DDR1Q08345 913 aa13.41□□□□□ -0.26
NCBP3-203ENST00000574379 FKBP8Q14318 412 aa13.41□□□□□ -0.26
NCBP3-203ENST00000574379 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
NCBP3-203ENST00000574379 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
NCBP3-203ENST00000574379 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
NCBP3-203ENST00000574379 CAPNS2Q96L46 248 aa13.4□□□□□ -0.26
NCBP3-203ENST00000574379 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.26
NCBP3-203ENST00000574379 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
NCBP3-203ENST00000574379 ECE1P42892 770 aa13.39□□□□□ -0.27
NCBP3-203ENST00000574379 CYP4F22Q6NT55 531 aa13.39□□□□□ -0.27
NCBP3-203ENST00000574379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 22.6
NCBP3-203ENST00000574379 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
NCBP3-203ENST00000574379 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
NCBP3-203ENST00000574379 ITGBL1O95965 494 aaPredicted RBP13.38□□□□□ -0.27
NCBP3-203ENST00000574379 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
NCBP3-203ENST00000574379 SULT6B1Q6IMI4 303 aa13.38□□□□□ -0.27
NCBP3-203ENST00000574379 C2CD5Q86YS7 1000 aa13.38□□□□□ -0.27
NCBP3-203ENST00000574379 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
NCBP3-203ENST00000574379 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
NCBP3-203ENST00000574379 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
NCBP3-203ENST00000574379 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
NCBP3-203ENST00000574379 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
NCBP3-203ENST00000574379 RALBP1Q15311 655 aa13.36□□□□□ -0.27
NCBP3-203ENST00000574379 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
NCBP3-203ENST00000574379 GCC1Q96CN9 775 aa13.36□□□□□ -0.27
NCBP3-203ENST00000574379 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
NCBP3-203ENST00000574379 H0YIN7 160 aa13.35□□□□□ -0.27
NCBP3-203ENST00000574379 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
NCBP3-203ENST00000574379 C21orf2O43822 256 aa13.35□□□□□ -0.27
NCBP3-203ENST00000574379 AOC2O75106 756 aa13.35□□□□□ -0.27
NCBP3-203ENST00000574379 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
NCBP3-203ENST00000574379 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.271e-7■□□□□ 10.7
NCBP3-203ENST00000574379 HMOX1P09601 288 aa13.34□□□□□ -0.27
NCBP3-203ENST00000574379 PHKG2P15735 406 aa13.34□□□□□ -0.27
NCBP3-203ENST00000574379 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
NCBP3-203ENST00000574379 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
NCBP3-203ENST00000574379 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms