RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ZBTB1Q9Y2K1 713 aa12.87□□□□□ -0.35
NPLOC4-216ENST00000574344 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-216ENST00000574344 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 FKBP8Q14318 412 aa12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-216ENST00000574344 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
NPLOC4-216ENST00000574344 LAMB4A4D0S4 1761 aa12.85□□□□□ -0.35
NPLOC4-216ENST00000574344 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
NPLOC4-216ENST00000574344 FCHSD2O94868 740 aa12.85□□□□□ -0.35
NPLOC4-216ENST00000574344 STARD3NLO95772 234 aa12.85□□□□□ -0.35
NPLOC4-216ENST00000574344 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 TGFB2P61812 414 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
NPLOC4-216ENST00000574344 CACNA1SQ13698 1873 aa12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 DDR1Q08345 913 aa12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 MCM10Q7L590 875 aa12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
NPLOC4-216ENST00000574344 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
NPLOC4-216ENST00000574344 DPEP1P16444 411 aa12.82□□□□□ -0.36
NPLOC4-216ENST00000574344 A0A087WZG4 1122 aa12.81□□□□□ -0.36
NPLOC4-216ENST00000574344 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-216ENST00000574344 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
NPLOC4-216ENST00000574344 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
NPLOC4-216ENST00000574344 KCNQ3O43525 872 aa12.8□□□□□ -0.36
NPLOC4-216ENST00000574344 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
NPLOC4-216ENST00000574344 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-216ENST00000574344 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
NPLOC4-216ENST00000574344 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
NPLOC4-216ENST00000574344 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-216ENST00000574344 NFIXQ14938 502 aa12.79□□□□□ -0.36
NPLOC4-216ENST00000574344 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-216ENST00000574344 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-216ENST00000574344 SBF1O95248 1867 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 A1BGP04217 495 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 TM4SF1P30408 202 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 CHRNA5P30532 468 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 RALBP1Q15311 655 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 ADCY9O60503 1353 aa12.78□□□□□ -0.36
NPLOC4-216ENST00000574344 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
NPLOC4-216ENST00000574344 NPHP1O15259 732 aa12.77□□□□□ -0.37
NPLOC4-216ENST00000574344 SERPINB2P05120 415 aa12.77□□□□□ -0.37
NPLOC4-216ENST00000574344 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
NPLOC4-216ENST00000574344 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-216ENST00000574344 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
NPLOC4-216ENST00000574344 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 CARMIL3Q8ND23 1372 aa12.76□□□□□ -0.37
NPLOC4-216ENST00000574344 KCNA3P22001 575 aa12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 NUP98P52948 1817 aa12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 TBC1D9BQ66K14 1250 aa12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
NPLOC4-216ENST00000574344 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
NPLOC4-216ENST00000574344 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-216ENST00000574344 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
NPLOC4-216ENST00000574344 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
NPLOC4-216ENST00000574344 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
NPLOC4-216ENST00000574344 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
NPLOC4-216ENST00000574344 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-216ENST00000574344 H0YIN7 160 aa12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
NPLOC4-216ENST00000574344 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-216ENST00000574344 DICER1Q9UPY3 1922 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-216ENST00000574344 ST5P78524 1137 aa12.71□□□□□ -0.37
NPLOC4-216ENST00000574344 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
NPLOC4-216ENST00000574344 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
NPLOC4-216ENST00000574344 PDE6BP35913 854 aa12.7□□□□□ -0.38
NPLOC4-216ENST00000574344 RIPK4P57078 832 aa12.7□□□□□ -0.38
NPLOC4-216ENST00000574344 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
NPLOC4-216ENST00000574344 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms