RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
PRPF8-206ENST00000572723 FCHSD2O94868 740 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 PPP2R1AP30153 589 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 PIM2Q9P1W9 311 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 ZBTB1Q9Y2K1 713 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 ADCY9O60503 1353 aa15.69■□□□□ 0.1
PRPF8-206ENST00000572723 PRKAR2BP31323 418 aa15.68■□□□□ 0.1
PRPF8-206ENST00000572723 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
PRPF8-206ENST00000572723 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
PRPF8-206ENST00000572723 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
PRPF8-206ENST00000572723 A0A087WZG4 1122 aa15.67■□□□□ 0.1
PRPF8-206ENST00000572723 U2AF1L5P0DN76 240 aaPredicted RBP15.67■□□□□ 0.1
PRPF8-206ENST00000572723 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
PRPF8-206ENST00000572723 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
PRPF8-206ENST00000572723 U2AF1Q01081 240 aaKnown RBP eCLIP15.67■□□□□ 0.1
PRPF8-206ENST00000572723 COL15A1P39059 1388 aa15.66■□□□□ 0.1
PRPF8-206ENST00000572723 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
PRPF8-206ENST00000572723 NFIXQ14938 502 aa15.66■□□□□ 0.1
PRPF8-206ENST00000572723 DALRD3Q5D0E6 543 aaKnown RBP15.66■□□□□ 0.1
PRPF8-206ENST00000572723 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
PRPF8-206ENST00000572723 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
PRPF8-206ENST00000572723 HEG1Q9ULI3 1381 aa15.65■□□□□ 0.1
PRPF8-206ENST00000572723 UBR2Q8IWV8 1755 aa15.65■□□□□ 0.1
PRPF8-206ENST00000572723 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
PRPF8-206ENST00000572723 ZNF526Q8TF50 670 aaPredicted RBP15.65■□□□□ 0.1
PRPF8-206ENST00000572723 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
PRPF8-206ENST00000572723 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
PRPF8-206ENST00000572723 SERPINB2P05120 415 aa15.64■□□□□ 0.09
PRPF8-206ENST00000572723 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
PRPF8-206ENST00000572723 SIPA1L3O60292 1781 aaPredicted RBP15.63■□□□□ 0.09
PRPF8-206ENST00000572723 CHRNA5P30532 468 aa15.63■□□□□ 0.09
PRPF8-206ENST00000572723 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
PRPF8-206ENST00000572723 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
PRPF8-206ENST00000572723 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
PRPF8-206ENST00000572723 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
PRPF8-206ENST00000572723 KCNQ3O43525 872 aa15.61■□□□□ 0.09
PRPF8-206ENST00000572723 A1BGP04217 495 aa15.61■□□□□ 0.09
PRPF8-206ENST00000572723 KIF3CO14782 793 aa15.6■□□□□ 0.09
PRPF8-206ENST00000572723 MCM10Q7L590 875 aa15.6■□□□□ 0.09
PRPF8-206ENST00000572723 TBC1D2BQ9UPU7 963 aa15.6■□□□□ 0.09
PRPF8-206ENST00000572723 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
PRPF8-206ENST00000572723 NEFMP07197 916 aa15.59■□□□□ 0.09
PRPF8-206ENST00000572723 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
PRPF8-206ENST00000572723 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
PRPF8-206ENST00000572723 C9orf131Q5VYM1 1079 aa15.59■□□□□ 0.09
PRPF8-206ENST00000572723 BICDL1Q6ZP65 573 aa15.59■□□□□ 0.09
PRPF8-206ENST00000572723 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
PRPF8-206ENST00000572723 NRXN2Q9P2S2 1712 aa15.58■□□□□ 0.08
PRPF8-206ENST00000572723 H0YIN7 160 aa15.58■□□□□ 0.08
PRPF8-206ENST00000572723 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
PRPF8-206ENST00000572723 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
PRPF8-206ENST00000572723 ZNF330Q9Y3S2 320 aaPredicted RBP15.58■□□□□ 0.08
PRPF8-206ENST00000572723 C2CD5Q86YS7 1000 aa15.57■□□□□ 0.08
PRPF8-206ENST00000572723 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
PRPF8-206ENST00000572723 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
PRPF8-206ENST00000572723 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
PRPF8-206ENST00000572723 SBF1O95248 1867 aa15.57■□□□□ 0.08
PRPF8-206ENST00000572723 CAMTA2O94983 1202 aa15.56■□□□□ 0.08
PRPF8-206ENST00000572723 HSPA6P17066 643 aa15.56■□□□□ 0.08
PRPF8-206ENST00000572723 PDE6BP35913 854 aa15.56■□□□□ 0.08
PRPF8-206ENST00000572723 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
PRPF8-206ENST00000572723 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
PRPF8-206ENST00000572723 TOMM70O94826 608 aa15.55■□□□□ 0.08
PRPF8-206ENST00000572723 DZIP3Q86Y13 1208 aaKnown RBP15.55■□□□□ 0.08
PRPF8-206ENST00000572723 RNF181Q9P0P0 153 aa15.55■□□□□ 0.08
PRPF8-206ENST00000572723 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
PRPF8-206ENST00000572723 PRR5LQ6MZQ0 368 aa15.54■□□□□ 0.08
PRPF8-206ENST00000572723 PNISRQ8TF01 805 aaKnown RBP15.54■□□□□ 0.08
PRPF8-206ENST00000572723 PLEKHF1Q96S99 279 aa15.54■□□□□ 0.08
PRPF8-206ENST00000572723 CARMIL3Q8ND23 1372 aa15.53■□□□□ 0.08
PRPF8-206ENST00000572723 RGL2O15211 777 aa15.53■□□□□ 0.08
PRPF8-206ENST00000572723 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.08
PRPF8-206ENST00000572723 LMNB1P20700 586 aa15.52■□□□□ 0.08
PRPF8-206ENST00000572723 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.08
PRPF8-206ENST00000572723 NMRK2Q9NPI5 230 aa15.52■□□□□ 0.08
PRPF8-206ENST00000572723 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 NPHP1O15259 732 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
PRPF8-206ENST00000572723 RALBP1Q15311 655 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
PRPF8-206ENST00000572723 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
PRPF8-206ENST00000572723 ZC3H4Q9UPT8 1303 aaKnown RBP15.5■□□□□ 0.07
PRPF8-206ENST00000572723 ST5P78524 1137 aa15.5■□□□□ 0.07
PRPF8-206ENST00000572723 CEP350Q5VT06 3117 aa15.5■□□□□ 0.07
PRPF8-206ENST00000572723 DLG5Q8TDM6 1919 aa15.5■□□□□ 0.07
PRPF8-206ENST00000572723 CCDC88AQ3V6T2 1871 aa15.49■□□□□ 0.07
PRPF8-206ENST00000572723 RASSF7Q02833 373 aa15.49■□□□□ 0.07
PRPF8-206ENST00000572723 C16orf71Q8IYS4 520 aaPredicted RBP15.49■□□□□ 0.07
PRPF8-206ENST00000572723 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
PRPF8-206ENST00000572723 RBM46Q8TBY0 533 aaKnown RBP15.49■□□□□ 0.07
PRPF8-206ENST00000572723 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
PRPF8-206ENST00000572723 ANKRD31Q8N7Z5 1873 aa15.48■□□□□ 0.07
PRPF8-206ENST00000572723 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms