RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 RBM46Q8TBY0 533 aaKnown RBP21.86■■□□□ 1.09
HCFC1R1-203ENST00000572355 KDM2BQ8NHM5 1336 aa21.85■■□□□ 1.09
HCFC1R1-203ENST00000572355 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
HCFC1R1-203ENST00000572355 RNMTO43148 476 aaKnown RBP21.85■■□□□ 1.09
HCFC1R1-203ENST00000572355 TM4SF1P30408 202 aa21.85■■□□□ 1.09
HCFC1R1-203ENST00000572355 NRXN2Q9P2S2 1712 aa21.85■■□□□ 1.09
HCFC1R1-203ENST00000572355 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
HCFC1R1-203ENST00000572355 CYP19A1P11511 503 aaPredicted RBP21.83■■□□□ 1.09
HCFC1R1-203ENST00000572355 RASSF7Q02833 373 aa21.83■■□□□ 1.09
HCFC1R1-203ENST00000572355 AMER1Q5JTC6 1135 aaPredicted RBP21.83■■□□□ 1.09
HCFC1R1-203ENST00000572355 DNAJC5GQ8N7S2 189 aa21.83■■□□□ 1.09
HCFC1R1-203ENST00000572355 ZBTB1Q9Y2K1 713 aa21.83■■□□□ 1.09
HCFC1R1-203ENST00000572355 HTRA3P83110 453 aa21.82■■□□□ 1.08
HCFC1R1-203ENST00000572355 NFIXQ14938 502 aa21.82■■□□□ 1.08
HCFC1R1-203ENST00000572355 TIAM2Q8IVF5 1701 aa21.82■■□□□ 1.08
HCFC1R1-203ENST00000572355 RRAGCQ9HB90 399 aa21.81■■□□□ 1.08
HCFC1R1-203ENST00000572355 NARFQ9UHQ1 456 aa21.8■■□□□ 1.08
HCFC1R1-203ENST00000572355 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
HCFC1R1-203ENST00000572355 FSTL1Q12841 308 aa21.78■■□□□ 1.08
HCFC1R1-203ENST00000572355 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
HCFC1R1-203ENST00000572355 KIF7Q2M1P5 1343 aa21.78■■□□□ 1.08
HCFC1R1-203ENST00000572355 CARMIL3Q8ND23 1372 aa21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 SCN7AQ01118 1682 aa21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 SERPINB2P05120 415 aa21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 CANXP27824 592 aaKnown RBP21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 CCDC88AQ3V6T2 1871 aa21.77■■□□□ 1.08
HCFC1R1-203ENST00000572355 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
HCFC1R1-203ENST00000572355 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
HCFC1R1-203ENST00000572355 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
HCFC1R1-203ENST00000572355 BICDL1Q6ZP65 573 aa21.75■■□□□ 1.07
HCFC1R1-203ENST00000572355 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
HCFC1R1-203ENST00000572355 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
HCFC1R1-203ENST00000572355 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
HCFC1R1-203ENST00000572355 ANKRD31Q8N7Z5 1873 aa21.74■■□□□ 1.07
HCFC1R1-203ENST00000572355 COL11A2P13942 1736 aaPredicted RBP21.73■■□□□ 1.07
HCFC1R1-203ENST00000572355 LMNB1P20700 586 aa21.73■■□□□ 1.07
HCFC1R1-203ENST00000572355 TTLL6Q8N841 843 aa21.73■■□□□ 1.07
HCFC1R1-203ENST00000572355 SIPA1L3O60292 1781 aaPredicted RBP21.73■■□□□ 1.07
HCFC1R1-203ENST00000572355 ZC3H4Q9UPT8 1303 aaKnown RBP21.73■■□□□ 1.07
HCFC1R1-203ENST00000572355 PRELPP51888 382 aa21.72■■□□□ 1.07
HCFC1R1-203ENST00000572355 SMC1BQ8NDV3 1235 aa21.72■■□□□ 1.07
HCFC1R1-203ENST00000572355 ZNF330Q9Y3S2 320 aaPredicted RBP21.72■■□□□ 1.07
HCFC1R1-203ENST00000572355 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
HCFC1R1-203ENST00000572355 H0YIN7 160 aa21.71■■□□□ 1.07
HCFC1R1-203ENST00000572355 STARD3NLO95772 234 aa21.71■■□□□ 1.07
HCFC1R1-203ENST00000572355 CNGB1Q14028 1251 aaPredicted RBP21.71■■□□□ 1.07
HCFC1R1-203ENST00000572355 CACNA1SQ13698 1873 aa21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 TEFQ10587 303 aa21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 ZNF496Q96IT1 587 aaPredicted RBP21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 HEG1Q9ULI3 1381 aa21.69■■□□□ 1.06
HCFC1R1-203ENST00000572355 A0A087WZG4 1122 aa21.68■■□□□ 1.06
HCFC1R1-203ENST00000572355 GLTPD2A6NH11 291 aa21.68■■□□□ 1.06
HCFC1R1-203ENST00000572355 NFKBIEO00221 500 aa21.68■■□□□ 1.06
HCFC1R1-203ENST00000572355 EIF5P55010 431 aaKnown RBP21.68■■□□□ 1.06
HCFC1R1-203ENST00000572355 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
HCFC1R1-203ENST00000572355 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
HCFC1R1-203ENST00000572355 CCDC24Q8N4L8 307 aa21.67■■□□□ 1.06
HCFC1R1-203ENST00000572355 ZNF622Q969S3 477 aaKnown RBP eCLIP21.67■■□□□ 1.06
HCFC1R1-203ENST00000572355 ZNF219Q9P2Y4 722 aaPredicted RBP21.67■■□□□ 1.06
HCFC1R1-203ENST00000572355 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
HCFC1R1-203ENST00000572355 VEGFAP15692 232 aaPredicted RBP21.66■■□□□ 1.06
HCFC1R1-203ENST00000572355 ZNF790Q6PG37 636 aa21.66■■□□□ 1.06
HCFC1R1-203ENST00000572355 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
HCFC1R1-203ENST00000572355 FER1L6Q2WGJ9 1857 aa21.66■■□□□ 1.06
HCFC1R1-203ENST00000572355 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
HCFC1R1-203ENST00000572355 GNAT3A8MTJ3 354 aa21.65■■□□□ 1.06
HCFC1R1-203ENST00000572355 GAS2L2Q8NHY3 880 aa21.65■■□□□ 1.06
HCFC1R1-203ENST00000572355 COL13A1Q5TAT6 717 aaPredicted RBP21.64■■□□□ 1.05
HCFC1R1-203ENST00000572355 PRR5LQ6MZQ0 368 aa21.64■■□□□ 1.05
HCFC1R1-203ENST00000572355 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
HCFC1R1-203ENST00000572355 NPHP1O15259 732 aa21.63■■□□□ 1.05
HCFC1R1-203ENST00000572355 C21orf2O43822 256 aa21.63■■□□□ 1.05
HCFC1R1-203ENST00000572355 PDE6BP35913 854 aa21.63■■□□□ 1.05
HCFC1R1-203ENST00000572355 BRIP1Q9BX63 1249 aa21.62■■□□□ 1.05
HCFC1R1-203ENST00000572355 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
HCFC1R1-203ENST00000572355 ARFGEF2Q9Y6D5 1785 aa21.61■■□□□ 1.05
HCFC1R1-203ENST00000572355 IL6STP40189 918 aaPredicted RBP21.61■■□□□ 1.05
HCFC1R1-203ENST00000572355 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
HCFC1R1-203ENST00000572355 FMNL2Q96PY5 1086 aa21.61■■□□□ 1.05
HCFC1R1-203ENST00000572355 SLX4Q8IY92 1834 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 A1BGP04217 495 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 ERFEQ4G0M1 354 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 DPY19L2Q6NUT2 758 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 PDZRN3Q9UPQ7 1066 aa21.6■■□□□ 1.05
HCFC1R1-203ENST00000572355 CAMTA2O94983 1202 aa21.59■■□□□ 1.05
HCFC1R1-203ENST00000572355 CEMIPQ8WUJ3 1361 aa21.59■■□□□ 1.05
HCFC1R1-203ENST00000572355 NPC1L1Q9UHC9 1359 aa21.59■■□□□ 1.05
HCFC1R1-203ENST00000572355 POTECB2RU33 542 aa21.58■■□□□ 1.05
HCFC1R1-203ENST00000572355 KCNQ3O43525 872 aa21.58■■□□□ 1.05
HCFC1R1-203ENST00000572355 ST5P78524 1137 aa21.58■■□□□ 1.05
HCFC1R1-203ENST00000572355 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
HCFC1R1-203ENST00000572355 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
HCFC1R1-203ENST00000572355 CAPN15O75808 1086 aa21.57■■□□□ 1.04
HCFC1R1-203ENST00000572355 PRKAR2BP31323 418 aa21.57■■□□□ 1.04
HCFC1R1-203ENST00000572355 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
HCFC1R1-203ENST00000572355 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms