RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 GPTP24298 496 aa19.58■□□□□ 0.73
RAB40B-206ENST00000571995 SMC3Q9UQE7 1217 aa19.58■□□□□ 0.73
RAB40B-206ENST00000571995 PIK3R4Q99570 1358 aa19.58■□□□□ 0.72
RAB40B-206ENST00000571995 SYCE3A1L190 88 aa19.58■□□□□ 0.72
RAB40B-206ENST00000571995 ADAMTS2O95450 1211 aa19.58■□□□□ 0.72
RAB40B-206ENST00000571995 SNRKQ9NRH2 765 aa19.58■□□□□ 0.72
RAB40B-206ENST00000571995 MAP3K5Q99683 1374 aa19.58■□□□□ 0.72
RAB40B-206ENST00000571995 MSNP26038 577 aaKnown RBP19.57■□□□□ 0.72
RAB40B-206ENST00000571995 RBM25P49756 843 aaKnown RBP19.57■□□□□ 0.72
RAB40B-206ENST00000571995 TMX3Q96JJ7 454 aa19.57■□□□□ 0.72
RAB40B-206ENST00000571995 EDC3Q96F86 508 aaKnown RBP19.57■□□□□ 0.72
RAB40B-206ENST00000571995 APPP05067 770 aa19.57■□□□□ 0.72
RAB40B-206ENST00000571995 CCDC83Q8IWF9 413 aa19.57■□□□□ 0.72
RAB40B-206ENST00000571995 IP6K1Q92551 441 aa19.57■□□□□ 0.72
RAB40B-206ENST00000571995 WASHC4Q2M389 1173 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 KIF1BPQ96EK5 621 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 A0A087WZG4 1122 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 FKBP4Q02790 459 aaKnown RBP eCLIP19.56■□□□□ 0.72
RAB40B-206ENST00000571995 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 MRE11P49959 708 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 NECAB1Q8N987 351 aa19.56■□□□□ 0.72
RAB40B-206ENST00000571995 ATP7BP35670 1465 aa19.55■□□□□ 0.72
RAB40B-206ENST00000571995 LRRC2Q9BYS8 371 aa19.54■□□□□ 0.72
RAB40B-206ENST00000571995 AXIN2Q9Y2T1 843 aa19.54■□□□□ 0.72
RAB40B-206ENST00000571995 CLTCQ00610 1675 aaKnown RBP19.54■□□□□ 0.72
RAB40B-206ENST00000571995 MYO3AQ8NEV4 1616 aa19.54■□□□□ 0.72
RAB40B-206ENST00000571995 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
RAB40B-206ENST00000571995 SOS1Q07889 1333 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-206ENST00000571995 PIP4K2BP78356 416 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 AATKQ6ZMQ8 1374 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 RUFY2Q8WXA3 655 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 GTF2E1P29083 439 aaPredicted RBP19.53■□□□□ 0.72
RAB40B-206ENST00000571995 SKOR2Q2VWA4 1001 aaPredicted RBP19.53■□□□□ 0.72
RAB40B-206ENST00000571995 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
RAB40B-206ENST00000571995 CHMLP26374 656 aa19.52■□□□□ 0.72
RAB40B-206ENST00000571995 PPLO60437 1756 aa19.52■□□□□ 0.72
RAB40B-206ENST00000571995 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
RAB40B-206ENST00000571995 HSP90AB4PQ58FF6 505 aa19.52■□□□□ 0.72
RAB40B-206ENST00000571995 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.72
RAB40B-206ENST00000571995 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
RAB40B-206ENST00000571995 RNMTO43148 476 aaKnown RBP19.51■□□□□ 0.71
RAB40B-206ENST00000571995 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
RAB40B-206ENST00000571995 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
RAB40B-206ENST00000571995 HSP90AB3PQ58FF7 597 aa19.51■□□□□ 0.71
RAB40B-206ENST00000571995 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
RAB40B-206ENST00000571995 DRC7Q8IY82 874 aa19.5■□□□□ 0.71
RAB40B-206ENST00000571995 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
RAB40B-206ENST00000571995 ZNF496Q96IT1 587 aaPredicted RBP19.5■□□□□ 0.71
RAB40B-206ENST00000571995 BICC1Q9H694 974 aaKnown RBP19.5■□□□□ 0.71
RAB40B-206ENST00000571995 GAS2L3Q86XJ1 694 aa19.5■□□□□ 0.71
RAB40B-206ENST00000571995 H3BQV1 296 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 HDAC5Q9UQL6 1122 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 MYO5BQ9ULV0 1848 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 SNX21Q969T3 373 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 KIF2CQ99661 725 aa19.49■□□□□ 0.71
RAB40B-206ENST00000571995 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
RAB40B-206ENST00000571995 FAM184AQ8NB25 1140 aa19.48■□□□□ 0.71
RAB40B-206ENST00000571995 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
RAB40B-206ENST00000571995 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
RAB40B-206ENST00000571995 A1BGP04217 495 aa19.47■□□□□ 0.71
RAB40B-206ENST00000571995 CDK12Q9NYV4 1490 aaPredicted RBP19.47■□□□□ 0.71
RAB40B-206ENST00000571995 C19orf44Q9H6X5 657 aa19.47■□□□□ 0.71
RAB40B-206ENST00000571995 PTPRUQ92729 1446 aa19.47■□□□□ 0.71
RAB40B-206ENST00000571995 FAM227BQ96M60 508 aa19.47■□□□□ 0.71
RAB40B-206ENST00000571995 KIAA1210Q9ULL0 1709 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 FAM173BQ6P4H8 233 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 RRAGDQ9NQL2 400 aaPredicted RBP19.46■□□□□ 0.71
RAB40B-206ENST00000571995 ARHGEF28Q8N1W1 1705 aaKnown RBP19.46■□□□□ 0.71
RAB40B-206ENST00000571995 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 ECHDC1Q9NTX5 307 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 PDRG1Q9NUG6 133 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 GRM8O00222 908 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 GLRX3O76003 335 aaKnown RBP19.46■□□□□ 0.71
RAB40B-206ENST00000571995 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
RAB40B-206ENST00000571995 BICDL1Q6ZP65 573 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
RAB40B-206ENST00000571995 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
RAB40B-206ENST00000571995 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 LMBR1LQ6UX01 489 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 SIRT1Q96EB6 747 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
RAB40B-206ENST00000571995 TFIP11Q9UBB9 837 aaKnown RBP19.45■□□□□ 0.7
RAB40B-206ENST00000571995 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 RAB11FIP3O75154 756 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 KSR2Q6VAB6 950 aa19.45■□□□□ 0.7
RAB40B-206ENST00000571995 GNL2Q13823 731 aaKnown RBP19.44■□□□□ 0.7
RAB40B-206ENST00000571995 ZRSR1Q15695 479 aaKnown RBP19.44■□□□□ 0.7
RAB40B-206ENST00000571995 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
RAB40B-206ENST00000571995 ZNF594Q96JF6 807 aaPredicted RBP19.44■□□□□ 0.7
RAB40B-206ENST00000571995 PREX1Q8TCU6 1659 aa19.44■□□□□ 0.7
RAB40B-206ENST00000571995 CYP46A1Q9Y6A2 500 aa19.44■□□□□ 0.7
RAB40B-206ENST00000571995 HAND2P61296 217 aa19.44■□□□□ 0.7
RAB40B-206ENST00000571995 ZNF790Q6PG37 636 aa19.44■□□□□ 0.7
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