RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 NRXN2Q9P2S2 1712 aa15.24■□□□□ 0.03
LITAF-206ENST00000571277 POLRMTO00411 1230 aaKnown RBP15.24■□□□□ 0.03
LITAF-206ENST00000571277 USPL1Q5W0Q7 1092 aa15.24■□□□□ 0.03
LITAF-206ENST00000571277 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
LITAF-206ENST00000571277 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
LITAF-206ENST00000571277 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
LITAF-206ENST00000571277 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
LITAF-206ENST00000571277 TEFQ10587 303 aa15.23■□□□□ 0.03
LITAF-206ENST00000571277 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
LITAF-206ENST00000571277 NARFQ9UHQ1 456 aa15.23■□□□□ 0.03
LITAF-206ENST00000571277 HEG1Q9ULI3 1381 aa15.23■□□□□ 0.03
LITAF-206ENST00000571277 ZPR1O75312 459 aa15.22■□□□□ 0.03
LITAF-206ENST00000571277 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
LITAF-206ENST00000571277 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
LITAF-206ENST00000571277 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
LITAF-206ENST00000571277 NFIXQ14938 502 aa15.21■□□□□ 0.03
LITAF-206ENST00000571277 NUDCQ9Y266 331 aa15.21■□□□□ 0.03
LITAF-206ENST00000571277 FCHSD2O94868 740 aa15.2■□□□□ 0.02
LITAF-206ENST00000571277 STARD3NLO95772 234 aa15.2■□□□□ 0.02
LITAF-206ENST00000571277 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
LITAF-206ENST00000571277 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
LITAF-206ENST00000571277 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
LITAF-206ENST00000571277 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
LITAF-206ENST00000571277 KCNQ3O43525 872 aa15.19■□□□□ 0.02
LITAF-206ENST00000571277 CHRNA5P30532 468 aa15.18■□□□□ 0.02
LITAF-206ENST00000571277 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
LITAF-206ENST00000571277 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
LITAF-206ENST00000571277 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
LITAF-206ENST00000571277 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
LITAF-206ENST00000571277 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
LITAF-206ENST00000571277 MCM10Q7L590 875 aa15.17■□□□□ 0.02
LITAF-206ENST00000571277 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
LITAF-206ENST00000571277 FMNL2Q96PY5 1086 aa15.17■□□□□ 0.02
LITAF-206ENST00000571277 TEX13AQ9BXU3 409 aaPredicted RBP15.17■□□□□ 0.02
LITAF-206ENST00000571277 A1BGP04217 495 aa15.16■□□□□ 0.02
LITAF-206ENST00000571277 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 SERPINB2P05120 415 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
LITAF-206ENST00000571277 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
LITAF-206ENST00000571277 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 A0A087WZG4 1122 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 HTATSF1O43719 755 aaKnown RBP15.14■□□□□ 0.01
LITAF-206ENST00000571277 DALRD3Q5D0E6 543 aaKnown RBP15.14■□□□□ 0.01
LITAF-206ENST00000571277 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 SBF1O95248 1867 aa15.14■□□□□ 0.01
LITAF-206ENST00000571277 KIF3CO14782 793 aa15.13■□□□□ 0.01
LITAF-206ENST00000571277 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
LITAF-206ENST00000571277 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
LITAF-206ENST00000571277 PLEKHF1Q96S99 279 aa15.13■□□□□ 0.01
LITAF-206ENST00000571277 CAMTA2O94983 1202 aa15.12■□□□□ 0.01
LITAF-206ENST00000571277 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
LITAF-206ENST00000571277 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
LITAF-206ENST00000571277 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
LITAF-206ENST00000571277 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
LITAF-206ENST00000571277 CEP350Q5VT06 3117 aa15.11■□□□□ 0.01
LITAF-206ENST00000571277 COL11A2P13942 1736 aaPredicted RBP15.11■□□□□ 0.01
LITAF-206ENST00000571277 KDM3BQ7LBC6 1761 aa15.11■□□□□ 0.01
LITAF-206ENST00000571277 SNRPA1P09661 255 aaKnown RBP15.1■□□□□ 0.01
LITAF-206ENST00000571277 LAMB4A4D0S4 1761 aa15.09■□□□□ 0.01
LITAF-206ENST00000571277 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
LITAF-206ENST00000571277 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
LITAF-206ENST00000571277 NBPF26B4DH59 902 aa15.08■□□□□ 0
LITAF-206ENST00000571277 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
LITAF-206ENST00000571277 DZIP3Q86Y13 1208 aaKnown RBP15.08■□□□□ 0
LITAF-206ENST00000571277 C2CD5Q86YS7 1000 aa15.08■□□□□ 0
LITAF-206ENST00000571277 NBPF15Q8N660 670 aa15.08■□□□□ 0
LITAF-206ENST00000571277 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
LITAF-206ENST00000571277 PRELPP51888 382 aa15.07■□□□□ 0
LITAF-206ENST00000571277 NFE2L2Q16236 605 aa15.07■□□□□ 0
LITAF-206ENST00000571277 CCDC24Q8N4L8 307 aa15.07■□□□□ 0
LITAF-206ENST00000571277 TTLL6Q8N841 843 aa15.07■□□□□ 0
LITAF-206ENST00000571277 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
LITAF-206ENST00000571277 NMRK2Q9NPI5 230 aa15.07■□□□□ 0
LITAF-206ENST00000571277 H0YIN7 160 aa15.06■□□□□ 0
LITAF-206ENST00000571277 RASSF7Q02833 373 aa15.06■□□□□ 0
LITAF-206ENST00000571277 SETDB2Q96T68 719 aa15.06■□□□□ 0
LITAF-206ENST00000571277 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
LITAF-206ENST00000571277 RNF181Q9P0P0 153 aa15.06■□□□□ 0
LITAF-206ENST00000571277 HSPA6P17066 643 aa15.05■□□□□ -0
LITAF-206ENST00000571277 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
LITAF-206ENST00000571277 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ -0
LITAF-206ENST00000571277 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
LITAF-206ENST00000571277 NFKBIEO00221 500 aa15.04■□□□□ -0
LITAF-206ENST00000571277 RGL2O15211 777 aa15.04■□□□□ -0
LITAF-206ENST00000571277 PDE6BP35913 854 aa15.04■□□□□ -0
LITAF-206ENST00000571277 RALBP1Q15311 655 aa15.04■□□□□ -0
LITAF-206ENST00000571277 CNBD1Q8NA66 436 aa15.04■□□□□ -0
LITAF-206ENST00000571277 FER1L6Q2WGJ9 1857 aa15.03■□□□□ -0
LITAF-206ENST00000571277 ARFGEF2Q9Y6D5 1785 aa15.03■□□□□ -0
LITAF-206ENST00000571277 TOMM70O94826 608 aa15.03■□□□□ -0
LITAF-206ENST00000571277 NEFMP07197 916 aa15.03■□□□□ -0
LITAF-206ENST00000571277 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
LITAF-206ENST00000571277 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
LITAF-206ENST00000571277 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
LITAF-206ENST00000571277 SLX4Q8IY92 1834 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms