RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 ZPR1O75312 459 aa24.05■■□□□ 1.44
SIN3A-212ENST00000568919 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.44
SIN3A-212ENST00000568919 CANXP27824 592 aaKnown RBP24.05■■□□□ 1.44
SIN3A-212ENST00000568919 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
SIN3A-212ENST00000568919 NFE2L2Q16236 605 aa24.04■■□□□ 1.44
SIN3A-212ENST00000568919 USPL1Q5W0Q7 1092 aa24.04■■□□□ 1.44
SIN3A-212ENST00000568919 PARP3Q9Y6F1 533 aa24.04■■□□□ 1.44
SIN3A-212ENST00000568919 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SIN3A-212ENST00000568919 TM4SF1P30408 202 aa24.02■■□□□ 1.44
SIN3A-212ENST00000568919 EIF5P55010 431 aaKnown RBP24.02■■□□□ 1.44
SIN3A-212ENST00000568919 DLG5Q8TDM6 1919 aa24.02■■□□□ 1.44
SIN3A-212ENST00000568919 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
SIN3A-212ENST00000568919 PRKRIP1Q9H875 184 aaPredicted RBP24.01■■□□□ 1.43
SIN3A-212ENST00000568919 USP16Q9Y5T5 823 aa24.01■■□□□ 1.43
SIN3A-212ENST00000568919 CHD4Q14839 1912 aa24.01■■□□□ 1.43
SIN3A-212ENST00000568919 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
SIN3A-212ENST00000568919 COL15A1P39059 1388 aa24.01■■□□□ 1.43
SIN3A-212ENST00000568919 A1BGP04217 495 aa24■■□□□ 1.43
SIN3A-212ENST00000568919 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
SIN3A-212ENST00000568919 TGFB2P61812 414 aa23.99■■□□□ 1.43
SIN3A-212ENST00000568919 DDR1Q08345 913 aa23.99■■□□□ 1.43
SIN3A-212ENST00000568919 UTRNP46939 3433 aa23.99■■□□□ 1.43
SIN3A-212ENST00000568919 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
SIN3A-212ENST00000568919 SNRPA1P09661 255 aaKnown RBP23.98■■□□□ 1.43
SIN3A-212ENST00000568919 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
SIN3A-212ENST00000568919 A0A087WZG4 1122 aa23.97■■□□□ 1.43
SIN3A-212ENST00000568919 IL6STP40189 918 aaPredicted RBP23.97■■□□□ 1.43
SIN3A-212ENST00000568919 THUMPD2Q9BTF0 503 aaKnown RBP23.97■■□□□ 1.43
SIN3A-212ENST00000568919 WWC3Q9ULE0 1092 aa23.97■■□□□ 1.43
SIN3A-212ENST00000568919 KIF13BQ9NQT8 1826 aa23.96■■□□□ 1.43
SIN3A-212ENST00000568919 A0A0G2JLW4 131 aa23.96■■□□□ 1.43
SIN3A-212ENST00000568919 POLRMTO00411 1230 aaKnown RBP23.96■■□□□ 1.43
SIN3A-212ENST00000568919 PNISRQ8TF01 805 aaKnown RBP23.96■■□□□ 1.43
SIN3A-212ENST00000568919 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
SIN3A-212ENST00000568919 RIPK4P57078 832 aa23.95■■□□□ 1.42
SIN3A-212ENST00000568919 NFIXQ14938 502 aa23.95■■□□□ 1.42
SIN3A-212ENST00000568919 TBC1D2BQ9UPU7 963 aa23.94■■□□□ 1.42
SIN3A-212ENST00000568919 ZNF330Q9Y3S2 320 aaPredicted RBP23.94■■□□□ 1.42
SIN3A-212ENST00000568919 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
SIN3A-212ENST00000568919 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
SIN3A-212ENST00000568919 ADAMTS8Q9UP79 889 aa23.93■■□□□ 1.42
SIN3A-212ENST00000568919 GOLGB1Q14789 3259 aaKnown RBP23.93■■□□□ 1.42
SIN3A-212ENST00000568919 PXDNLA1KZ92 1463 aa23.93■■□□□ 1.42
SIN3A-212ENST00000568919 DPEP1P16444 411 aa23.92■■□□□ 1.42
SIN3A-212ENST00000568919 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
SIN3A-212ENST00000568919 N4BP2Q86UW6 1770 aaPredicted RBP23.91■■□□□ 1.42
SIN3A-212ENST00000568919 PIP4K2AP48426 406 aaPredicted RBP23.91■■□□□ 1.42
SIN3A-212ENST00000568919 NPM2Q86SE8 214 aaKnown RBP23.91■■□□□ 1.42
SIN3A-212ENST00000568919 ZNF784Q8NCA9 323 aaPredicted RBP23.91■■□□□ 1.42
SIN3A-212ENST00000568919 SERPINB2P05120 415 aa23.9■■□□□ 1.42
SIN3A-212ENST00000568919 KCNA3P22001 575 aa23.9■■□□□ 1.42
SIN3A-212ENST00000568919 RUNDC1Q96C34 613 aa23.9■■□□□ 1.42
SIN3A-212ENST00000568919 KIAA1551Q9HCM1 1747 aa23.9■■□□□ 1.42
SIN3A-212ENST00000568919 ZNF316A6NFI3 1004 aaPredicted RBP23.89■■□□□ 1.41
SIN3A-212ENST00000568919 EIF4A1P60842 406 aaKnown RBP23.89■■□□□ 1.41
SIN3A-212ENST00000568919 BICDL1Q6ZP65 573 aa23.89■■□□□ 1.41
SIN3A-212ENST00000568919 RRP7AQ9Y3A4 280 aaKnown RBP23.89■■□□□ 1.41
SIN3A-212ENST00000568919 NBPF26B4DH59 902 aa23.88■■□□□ 1.41
SIN3A-212ENST00000568919 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
SIN3A-212ENST00000568919 CAMTA2O94983 1202 aa23.88■■□□□ 1.41
SIN3A-212ENST00000568919 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
SIN3A-212ENST00000568919 NBPF10Q6P3W6 841 aaKnown RBP23.88■■□□□ 1.41
SIN3A-212ENST00000568919 NBPF15Q8N660 670 aa23.88■■□□□ 1.41
SIN3A-212ENST00000568919 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
SIN3A-212ENST00000568919 DZIP3Q86Y13 1208 aaKnown RBP23.87■■□□□ 1.41
SIN3A-212ENST00000568919 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
SIN3A-212ENST00000568919 BCS1LQ9Y276 419 aa23.86■■□□□ 1.41
SIN3A-212ENST00000568919 AFDNP55196 1824 aaKnown RBP23.86■■□□□ 1.41
SIN3A-212ENST00000568919 KDM3BQ7LBC6 1761 aa23.86■■□□□ 1.41
SIN3A-212ENST00000568919 CHRNA5P30532 468 aa23.84■■□□□ 1.41
SIN3A-212ENST00000568919 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
SIN3A-212ENST00000568919 BABAM1Q9NWV8 329 aa23.83■■□□□ 1.41
SIN3A-212ENST00000568919 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
SIN3A-212ENST00000568919 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
SIN3A-212ENST00000568919 NRXN2Q9P2S2 1712 aa23.82■■□□□ 1.4
SIN3A-212ENST00000568919 CLEC4GQ6UXB4 293 aa23.81■■□□□ 1.4
SIN3A-212ENST00000568919 SETDB2Q96T68 719 aa23.81■■□□□ 1.4
SIN3A-212ENST00000568919 BRCA1P38398 1863 aaKnown RBP23.81■■□□□ 1.4
SIN3A-212ENST00000568919 SCN7AQ01118 1682 aa23.79■■□□□ 1.4
SIN3A-212ENST00000568919 CCDC184Q52MB2 194 aa23.79■■□□□ 1.4
SIN3A-212ENST00000568919 DALRD3Q5D0E6 543 aaKnown RBP23.79■■□□□ 1.4
SIN3A-212ENST00000568919 ARHGAP27Q6ZUM4 889 aa23.79■■□□□ 1.4
SIN3A-212ENST00000568919 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
SIN3A-212ENST00000568919 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
SIN3A-212ENST00000568919 CHL1O00533 1208 aa23.77■■□□□ 1.4
SIN3A-212ENST00000568919 PRR5LQ6MZQ0 368 aa23.77■■□□□ 1.4
SIN3A-212ENST00000568919 LAMB4A4D0S4 1761 aa23.76■■□□□ 1.39
SIN3A-212ENST00000568919 C2CD5Q86YS7 1000 aa23.76■■□□□ 1.39
SIN3A-212ENST00000568919 CCDC24Q8N4L8 307 aa23.76■■□□□ 1.39
SIN3A-212ENST00000568919 ZNF652Q9Y2D9 606 aa23.76■■□□□ 1.39
SIN3A-212ENST00000568919 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 APAF1O14727 1248 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 RGL2O15211 777 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 MYL6BP14649 208 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 HLFQ16534 295 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 BRIP1Q9BX63 1249 aa23.75■■□□□ 1.39
SIN3A-212ENST00000568919 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
SIN3A-212ENST00000568919 H0YIN7 160 aa23.74■■□□□ 1.39
SIN3A-212ENST00000568919 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
SIN3A-212ENST00000568919 ARFGEF1Q9Y6D6 1849 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms