RNA–Protein interactions for RNA: ENST00000568235.5

ACSM3-213, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-213ENST00000568235 COL15A1P39059 1388 aa16.41■□□□□ 0.22
ACSM3-213ENST00000568235 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
ACSM3-213ENST00000568235 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
ACSM3-213ENST00000568235 C9orf131Q5VYM1 1079 aa16.41■□□□□ 0.22
ACSM3-213ENST00000568235 NFIXQ14938 502 aa16.4■□□□□ 0.22
ACSM3-213ENST00000568235 NMRK2Q9NPI5 230 aa16.4■□□□□ 0.22
ACSM3-213ENST00000568235 UBR2Q8IWV8 1755 aa16.39■□□□□ 0.21
ACSM3-213ENST00000568235 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
ACSM3-213ENST00000568235 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
ACSM3-213ENST00000568235 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
ACSM3-213ENST00000568235 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
ACSM3-213ENST00000568235 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
ACSM3-213ENST00000568235 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
ACSM3-213ENST00000568235 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
ACSM3-213ENST00000568235 RNF181Q9P0P0 153 aa16.37■□□□□ 0.21
ACSM3-213ENST00000568235 TOMM70O94826 608 aa16.36■□□□□ 0.21
ACSM3-213ENST00000568235 TEFQ10587 303 aa16.36■□□□□ 0.21
ACSM3-213ENST00000568235 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
ACSM3-213ENST00000568235 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
ACSM3-213ENST00000568235 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
ACSM3-213ENST00000568235 SERPINB2P05120 415 aa16.35■□□□□ 0.21
ACSM3-213ENST00000568235 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
ACSM3-213ENST00000568235 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
ACSM3-213ENST00000568235 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
ACSM3-213ENST00000568235 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
ACSM3-213ENST00000568235 STARD3NLO95772 234 aa16.34■□□□□ 0.21
ACSM3-213ENST00000568235 RASSF7Q02833 373 aa16.34■□□□□ 0.21
ACSM3-213ENST00000568235 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
ACSM3-213ENST00000568235 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
ACSM3-213ENST00000568235 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
ACSM3-213ENST00000568235 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
ACSM3-213ENST00000568235 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
ACSM3-213ENST00000568235 SBF1O95248 1867 aa16.33■□□□□ 0.2
ACSM3-213ENST00000568235 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
ACSM3-213ENST00000568235 APLP1P51693 650 aa16.32■□□□□ 0.2
ACSM3-213ENST00000568235 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
ACSM3-213ENST00000568235 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
ACSM3-213ENST00000568235 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
ACSM3-213ENST00000568235 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
ACSM3-213ENST00000568235 A0A087WZG4 1122 aa16.31■□□□□ 0.2
ACSM3-213ENST00000568235 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
ACSM3-213ENST00000568235 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
ACSM3-213ENST00000568235 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 KCNQ3O43525 872 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 A1BGP04217 495 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 RRAGCQ9HB90 399 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
ACSM3-213ENST00000568235 PRELPP51888 382 aa16.29■□□□□ 0.2
ACSM3-213ENST00000568235 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
ACSM3-213ENST00000568235 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
ACSM3-213ENST00000568235 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
ACSM3-213ENST00000568235 BTBD11A6QL63 1104 aa16.28■□□□□ 0.2
ACSM3-213ENST00000568235 H0YIN7 160 aa16.28■□□□□ 0.2
ACSM3-213ENST00000568235 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
ACSM3-213ENST00000568235 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
ACSM3-213ENST00000568235 ANKRD31Q8N7Z5 1873 aa16.28■□□□□ 0.2
ACSM3-213ENST00000568235 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
ACSM3-213ENST00000568235 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
ACSM3-213ENST00000568235 HTRA3P83110 453 aa16.27■□□□□ 0.2
ACSM3-213ENST00000568235 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.19
ACSM3-213ENST00000568235 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
ACSM3-213ENST00000568235 LMNB1P20700 586 aa16.26■□□□□ 0.19
ACSM3-213ENST00000568235 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
ACSM3-213ENST00000568235 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
ACSM3-213ENST00000568235 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
ACSM3-213ENST00000568235 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.194e-6■■□□□ 12.7
ACSM3-213ENST00000568235 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
ACSM3-213ENST00000568235 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
ACSM3-213ENST00000568235 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 NFKBIEO00221 500 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 MCM10Q7L590 875 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
ACSM3-213ENST00000568235 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
ACSM3-213ENST00000568235 FSTL1Q12841 308 aa16.24■□□□□ 0.19
ACSM3-213ENST00000568235 BRIP1Q9BX63 1249 aa16.24■□□□□ 0.19
ACSM3-213ENST00000568235 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
ACSM3-213ENST00000568235 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
ACSM3-213ENST00000568235 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 NPHP1O15259 732 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 PDE6BP35913 854 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
ACSM3-213ENST00000568235 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
ACSM3-213ENST00000568235 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
ACSM3-213ENST00000568235 C21orf2O43822 256 aa16.22■□□□□ 0.19
ACSM3-213ENST00000568235 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
ACSM3-213ENST00000568235 SMC1BQ8NDV3 1235 aa16.21■□□□□ 0.19
ACSM3-213ENST00000568235 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
ACSM3-213ENST00000568235 ST5P78524 1137 aa16.2■□□□□ 0.18
ACSM3-213ENST00000568235 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms