RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 TEX13AQ9BXU3 409 aaPredicted RBP22.63■■□□□ 1.21
KNOP1-205ENST00000568230 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
KNOP1-205ENST00000568230 COL15A1P39059 1388 aa22.63■■□□□ 1.21
KNOP1-205ENST00000568230 MMP10P09238 476 aa22.62■■□□□ 1.21
KNOP1-205ENST00000568230 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
KNOP1-205ENST00000568230 TAF7Q15545 349 aaPredicted RBP22.62■■□□□ 1.21
KNOP1-205ENST00000568230 SRP68Q9UHB9 627 aaKnown RBP22.61■■□□□ 1.21
KNOP1-205ENST00000568230 KIF13BQ9NQT8 1826 aa22.59■■□□□ 1.21
KNOP1-205ENST00000568230 TMPOP42166 694 aaKnown RBP22.58■■□□□ 1.21
KNOP1-205ENST00000568230 THUMPD2Q9BTF0 503 aaKnown RBP22.58■■□□□ 1.21
KNOP1-205ENST00000568230 ADAMTS8Q9UP79 889 aa22.58■■□□□ 1.21
KNOP1-205ENST00000568230 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 EIF5P55010 431 aaKnown RBP22.57■■□□□ 1.2
KNOP1-205ENST00000568230 FKBP8Q14318 412 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 PNISRQ8TF01 805 aaKnown RBP22.57■■□□□ 1.2
KNOP1-205ENST00000568230 C10orf71Q711Q0 1435 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
KNOP1-205ENST00000568230 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
KNOP1-205ENST00000568230 RIPK4P57078 832 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 RUNDC1Q96C34 613 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 MIS18AQ9NYP9 233 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 NARFQ9UHQ1 456 aa22.57■■□□□ 1.2
KNOP1-205ENST00000568230 SCN7AQ01118 1682 aa22.56■■□□□ 1.2
KNOP1-205ENST00000568230 ZPR1O75312 459 aa22.56■■□□□ 1.2
KNOP1-205ENST00000568230 LMOD3Q0VAK6 560 aa22.56■■□□□ 1.2
KNOP1-205ENST00000568230 IL6STP40189 918 aaPredicted RBP22.55■■□□□ 1.2
KNOP1-205ENST00000568230 USPL1Q5W0Q7 1092 aa22.55■■□□□ 1.2
KNOP1-205ENST00000568230 KIAA1551Q9HCM1 1747 aa22.54■■□□□ 1.2
KNOP1-205ENST00000568230 PRAMEF22A3QJZ6 481 aa22.54■■□□□ 1.2
KNOP1-205ENST00000568230 USP16Q9Y5T5 823 aa22.54■■□□□ 1.2
KNOP1-205ENST00000568230 A0A087WZG4 1122 aa22.53■■□□□ 1.2
KNOP1-205ENST00000568230 A1BGP04217 495 aa22.53■■□□□ 1.2
KNOP1-205ENST00000568230 DDR1Q08345 913 aa22.53■■□□□ 1.2
KNOP1-205ENST00000568230 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
KNOP1-205ENST00000568230 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
KNOP1-205ENST00000568230 BCL2L12Q9HB09 334 aa22.52■■□□□ 1.2
KNOP1-205ENST00000568230 PXDNLA1KZ92 1463 aa22.51■■□□□ 1.19
KNOP1-205ENST00000568230 TM4SF1P30408 202 aa22.51■■□□□ 1.19
KNOP1-205ENST00000568230 GPR162Q16538 588 aa22.51■■□□□ 1.19
KNOP1-205ENST00000568230 BCORQ6W2J9 1755 aa22.51■■□□□ 1.19
KNOP1-205ENST00000568230 CHD4Q14839 1912 aa22.5■■□□□ 1.19
KNOP1-205ENST00000568230 EIF4A1P60842 406 aaKnown RBP22.5■■□□□ 1.19
KNOP1-205ENST00000568230 NRXN2Q9P2S2 1712 aa22.49■■□□□ 1.19
KNOP1-205ENST00000568230 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
KNOP1-205ENST00000568230 YBX3P16989 372 aaKnown RBP eCLIP22.49■■□□□ 1.19
KNOP1-205ENST00000568230 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
KNOP1-205ENST00000568230 BABAM1Q9NWV8 329 aa22.49■■□□□ 1.19
KNOP1-205ENST00000568230 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
KNOP1-205ENST00000568230 AFDNP55196 1824 aaKnown RBP22.48■■□□□ 1.19
KNOP1-205ENST00000568230 ANP32CO43423 234 aa22.48■■□□□ 1.19
KNOP1-205ENST00000568230 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
KNOP1-205ENST00000568230 NFIXQ14938 502 aa22.48■■□□□ 1.19
KNOP1-205ENST00000568230 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
KNOP1-205ENST00000568230 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
KNOP1-205ENST00000568230 TSPYL4Q9UJ04 414 aa22.48■■□□□ 1.19
KNOP1-205ENST00000568230 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
KNOP1-205ENST00000568230 N4BP2Q86UW6 1770 aaPredicted RBP22.46■■□□□ 1.19
KNOP1-205ENST00000568230 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
KNOP1-205ENST00000568230 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
KNOP1-205ENST00000568230 TGFB2P61812 414 aa22.46■■□□□ 1.19
KNOP1-205ENST00000568230 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
KNOP1-205ENST00000568230 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
KNOP1-205ENST00000568230 TBC1D2BQ9UPU7 963 aa22.46■■□□□ 1.19
KNOP1-205ENST00000568230 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
KNOP1-205ENST00000568230 CAMTA2O94983 1202 aa22.45■■□□□ 1.18
KNOP1-205ENST00000568230 YY1P25490 414 aa22.45■■□□□ 1.18
KNOP1-205ENST00000568230 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
KNOP1-205ENST00000568230 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
KNOP1-205ENST00000568230 DZIP3Q86Y13 1208 aaKnown RBP22.43■■□□□ 1.18
KNOP1-205ENST00000568230 APAF1O14727 1248 aa22.42■■□□□ 1.18
KNOP1-205ENST00000568230 CHL1O00533 1208 aa22.41■■□□□ 1.18
KNOP1-205ENST00000568230 TBC1D9BQ66K14 1250 aa22.41■■□□□ 1.18
KNOP1-205ENST00000568230 RGL2O15211 777 aa22.4■■□□□ 1.18
KNOP1-205ENST00000568230 SERPINB2P05120 415 aa22.4■■□□□ 1.18
KNOP1-205ENST00000568230 MRS2Q9HD23 443 aa22.4■■□□□ 1.18
KNOP1-205ENST00000568230 CARMIL3Q8ND23 1372 aa22.4■■□□□ 1.18
KNOP1-205ENST00000568230 A0A0G2JLW4 131 aa22.39■■□□□ 1.18
KNOP1-205ENST00000568230 DPEP1P16444 411 aa22.39■■□□□ 1.18
KNOP1-205ENST00000568230 ERBB4Q15303 1308 aa22.39■■□□□ 1.17
KNOP1-205ENST00000568230 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
KNOP1-205ENST00000568230 BICDL1Q6ZP65 573 aa22.38■■□□□ 1.17
KNOP1-205ENST00000568230 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
KNOP1-205ENST00000568230 KCNA3P22001 575 aa22.37■■□□□ 1.17
KNOP1-205ENST00000568230 DLEC1Q9Y238 1755 aa22.37■■□□□ 1.17
KNOP1-205ENST00000568230 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
KNOP1-205ENST00000568230 ZNF652Q9Y2D9 606 aa22.36■■□□□ 1.17
KNOP1-205ENST00000568230 ARFGEF1Q9Y6D6 1849 aa22.35■■□□□ 1.17
KNOP1-205ENST00000568230 ANKRD31Q8N7Z5 1873 aa22.35■■□□□ 1.17
KNOP1-205ENST00000568230 SETDB2Q96T68 719 aa22.34■■□□□ 1.17
KNOP1-205ENST00000568230 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
KNOP1-205ENST00000568230 ZNF853P0CG23 659 aa22.33■■□□□ 1.17
KNOP1-205ENST00000568230 CALD1Q05682 793 aaKnown RBP22.33■■□□□ 1.17
KNOP1-205ENST00000568230 PRR5LQ6MZQ0 368 aa22.33■■□□□ 1.17
KNOP1-205ENST00000568230 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
KNOP1-205ENST00000568230 CHRNA5P30532 468 aa22.32■■□□□ 1.16
KNOP1-205ENST00000568230 PDIA6Q15084 440 aa22.32■■□□□ 1.16
KNOP1-205ENST00000568230 LRP10Q7Z4F1 713 aa22.32■■□□□ 1.16
KNOP1-205ENST00000568230 BCS1LQ9Y276 419 aa22.32■■□□□ 1.16
KNOP1-205ENST00000568230 ERVV-1B6SEH8 477 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms