RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 INTS5Q6P9B9 1019 aaKnown RBP23.37■■□□□ 1.33
COMMD4-222ENST00000568034 AMIGO3Q86WK7 504 aa23.37■■□□□ 1.33
COMMD4-222ENST00000568034 TRMT2AQ8IZ69 625 aaKnown RBP23.37■■□□□ 1.33
COMMD4-222ENST00000568034 TEX13AQ9BXU3 409 aaPredicted RBP23.37■■□□□ 1.33
COMMD4-222ENST00000568034 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
COMMD4-222ENST00000568034 SLC15A2Q16348 729 aa23.36■■□□□ 1.33
COMMD4-222ENST00000568034 C8orf58Q8NAV2 365 aa23.36■■□□□ 1.33
COMMD4-222ENST00000568034 MYH16Q9H6N6 1097 aa23.36■■□□□ 1.33
COMMD4-222ENST00000568034 TSPYL6Q8N831 410 aa23.35■■□□□ 1.33
COMMD4-222ENST00000568034 STK32BQ9NY57 414 aa23.35■■□□□ 1.33
COMMD4-222ENST00000568034 ZBTB1Q9Y2K1 713 aa23.35■■□□□ 1.33
COMMD4-222ENST00000568034 STARD3NLO95772 234 aa23.34■■□□□ 1.33
COMMD4-222ENST00000568034 DUSP27Q5VZP5 1158 aa23.34■■□□□ 1.33
COMMD4-222ENST00000568034 CCDC87Q9NVE4 849 aa23.34■■□□□ 1.33
COMMD4-222ENST00000568034 HOXB7P09629 217 aa23.33■■□□□ 1.33
COMMD4-222ENST00000568034 HMGB2P26583 209 aaKnown RBP23.33■■□□□ 1.33
COMMD4-222ENST00000568034 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
COMMD4-222ENST00000568034 SMIM5Q71RC9 77 aa23.33■■□□□ 1.33
COMMD4-222ENST00000568034 AK7Q96M32 723 aa23.33■■□□□ 1.33
COMMD4-222ENST00000568034 GNPATO15228 680 aa23.32■■□□□ 1.32
COMMD4-222ENST00000568034 A1BGP04217 495 aa23.32■■□□□ 1.32
COMMD4-222ENST00000568034 EXOSC9Q06265 439 aaKnown RBP23.32■■□□□ 1.32
COMMD4-222ENST00000568034 PNPLA7Q6ZV29 1317 aa23.32■■□□□ 1.32
COMMD4-222ENST00000568034 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
COMMD4-222ENST00000568034 SOS1Q07889 1333 aaPredicted RBP23.31■■□□□ 1.32
COMMD4-222ENST00000568034 NBPF26B4DH59 902 aa23.3■■□□□ 1.32
COMMD4-222ENST00000568034 RPS6KA4O75676 772 aa23.3■■□□□ 1.32
COMMD4-222ENST00000568034 NBPF10Q6P3W6 841 aaKnown RBP23.3■■□□□ 1.32
COMMD4-222ENST00000568034 NBPF15Q8N660 670 aa23.3■■□□□ 1.32
COMMD4-222ENST00000568034 CASZ1Q86V15 1759 aa23.29■■□□□ 1.32
COMMD4-222ENST00000568034 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
COMMD4-222ENST00000568034 R3HDM1Q15032 1099 aaKnown RBP23.29■■□□□ 1.32
COMMD4-222ENST00000568034 TFCP2L1Q9NZI6 479 aa23.29■■□□□ 1.32
COMMD4-222ENST00000568034 EIF2S2P20042 333 aaKnown RBP23.28■■□□□ 1.32
COMMD4-222ENST00000568034 SSFA2P28290 1259 aa23.28■■□□□ 1.32
COMMD4-222ENST00000568034 PDIA6Q15084 440 aa23.28■■□□□ 1.32
COMMD4-222ENST00000568034 TWISTNBQ3B726 338 aaPredicted RBP23.28■■□□□ 1.32
COMMD4-222ENST00000568034 C4AP0C0L4 1744 aa23.28■■□□□ 1.32
COMMD4-222ENST00000568034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.27■■□□□ 1.32
COMMD4-222ENST00000568034 CANXP27824 592 aaKnown RBP23.27■■□□□ 1.32
COMMD4-222ENST00000568034 EIF5P55010 431 aaKnown RBP23.27■■□□□ 1.32
COMMD4-222ENST00000568034 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
COMMD4-222ENST00000568034 LRP10Q7Z4F1 713 aa23.27■■□□□ 1.32
COMMD4-222ENST00000568034 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
COMMD4-222ENST00000568034 RTCBQ9Y3I0 505 aaKnown RBP23.27■■□□□ 1.32
COMMD4-222ENST00000568034 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
COMMD4-222ENST00000568034 PSDA5PKW4 1024 aaPredicted RBP23.26■■□□□ 1.31
COMMD4-222ENST00000568034 VAMP4O75379 141 aa23.26■■□□□ 1.31
COMMD4-222ENST00000568034 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
COMMD4-222ENST00000568034 COL23A1Q86Y22 540 aaPredicted RBP23.26■■□□□ 1.31
COMMD4-222ENST00000568034 NECTIN2Q92692 538 aa23.26■■□□□ 1.31
COMMD4-222ENST00000568034 PHF14O94880 888 aa23.25■■□□□ 1.31
COMMD4-222ENST00000568034 IL6STP40189 918 aaPredicted RBP23.25■■□□□ 1.31
COMMD4-222ENST00000568034 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
COMMD4-222ENST00000568034 COL15A1P39059 1388 aa23.25■■□□□ 1.31
COMMD4-222ENST00000568034 ADRA2BP18089 450 aa23.24■■□□□ 1.31
COMMD4-222ENST00000568034 CHPF2Q9P2E5 772 aa23.24■■□□□ 1.31
COMMD4-222ENST00000568034 ANXA1P04083 346 aa23.23■■□□□ 1.31
COMMD4-222ENST00000568034 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
COMMD4-222ENST00000568034 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
COMMD4-222ENST00000568034 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
COMMD4-222ENST00000568034 FLAD1Q8NFF5 587 aa23.21■■□□□ 1.31
COMMD4-222ENST00000568034 MYL6BP14649 208 aa23.2■■□□□ 1.3
COMMD4-222ENST00000568034 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
COMMD4-222ENST00000568034 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
COMMD4-222ENST00000568034 DBF4Q9UBU7 674 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-222ENST00000568034 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
COMMD4-222ENST00000568034 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
COMMD4-222ENST00000568034 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
COMMD4-222ENST00000568034 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
COMMD4-222ENST00000568034 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
COMMD4-222ENST00000568034 A0A087WZG4 1122 aa23.16■■□□□ 1.3
COMMD4-222ENST00000568034 TTLL7Q6ZT98 887 aa23.16■■□□□ 1.3
COMMD4-222ENST00000568034 NARFQ9UHQ1 456 aa23.16■■□□□ 1.3
COMMD4-222ENST00000568034 COL24A1Q17RW2 1714 aa23.16■■□□□ 1.3
COMMD4-222ENST00000568034 CAMTA2O94983 1202 aa23.15■■□□□ 1.3
COMMD4-222ENST00000568034 CT47B1P0C2W7 299 aaPredicted RBP23.15■■□□□ 1.3
COMMD4-222ENST00000568034 RFC4P35249 363 aa23.15■■□□□ 1.3
COMMD4-222ENST00000568034 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
COMMD4-222ENST00000568034 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
COMMD4-222ENST00000568034 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
COMMD4-222ENST00000568034 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
COMMD4-222ENST00000568034 MSH5O43196 834 aa23.14■■□□□ 1.29
COMMD4-222ENST00000568034 GYS1P13807 737 aa23.14■■□□□ 1.29
COMMD4-222ENST00000568034 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
COMMD4-222ENST00000568034 PHAXQ9H814 394 aaKnown RBP23.14■■□□□ 1.29
COMMD4-222ENST00000568034 HYPKQ9NX55 129 aa23.14■■□□□ 1.29
COMMD4-222ENST00000568034 USPL1Q5W0Q7 1092 aa23.13■■□□□ 1.29
COMMD4-222ENST00000568034 COPS6Q7L5N1 327 aa23.13■■□□□ 1.29
COMMD4-222ENST00000568034 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
COMMD4-222ENST00000568034 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
COMMD4-222ENST00000568034 G2E3Q7L622 706 aa23.12■■□□□ 1.29
COMMD4-222ENST00000568034 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
COMMD4-222ENST00000568034 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
COMMD4-222ENST00000568034 ZBTB7AO95365 584 aa23.11■■□□□ 1.29
COMMD4-222ENST00000568034 SLC4A2P04920 1241 aa23.11■■□□□ 1.29
COMMD4-222ENST00000568034 SSH1Q8WYL5 1049 aa23.11■■□□□ 1.29
COMMD4-222ENST00000568034 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
COMMD4-222ENST00000568034 ZPR1O75312 459 aa23.1■■□□□ 1.29
COMMD4-222ENST00000568034 FKBP8Q14318 412 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms