RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 YBX3P16989 372 aaKnown RBP eCLIP33.41■■■□□ 2.94
FANCA-228ENST00000567943 KIAA1551Q9HCM1 1747 aa33.39■■■□□ 2.94
FANCA-228ENST00000567943 FKBP8Q14318 412 aa33.39■■■□□ 2.94
FANCA-228ENST00000567943 NEFMP07197 916 aa33.38■■■□□ 2.93
FANCA-228ENST00000567943 COL15A1P39059 1388 aa33.37■■■□□ 2.93
FANCA-228ENST00000567943 PELP1Q8IZL8 1130 aaKnown RBP33.37■■■□□ 2.93
FANCA-228ENST00000567943 FMNL2Q96PY5 1086 aa33.37■■■□□ 2.93
FANCA-228ENST00000567943 STARD3NLO95772 234 aa33.35■■■□□ 2.93
FANCA-228ENST00000567943 NFE2L2Q16236 605 aa33.35■■■□□ 2.93
FANCA-228ENST00000567943 CANXP27824 592 aaKnown RBP33.34■■■□□ 2.93
FANCA-228ENST00000567943 DDR1Q08345 913 aa33.33■■■□□ 2.93
FANCA-228ENST00000567943 USPL1Q5W0Q7 1092 aa33.33■■■□□ 2.93
FANCA-228ENST00000567943 PNNQ9H307 717 aaKnown RBP33.33■■■□□ 2.93
FANCA-228ENST00000567943 C10orf71Q711Q0 1435 aa33.33■■■□□ 2.93
FANCA-228ENST00000567943 N4BP2Q86UW6 1770 aaPredicted RBP33.32■■■□□ 2.92
FANCA-228ENST00000567943 PRAMEF22A3QJZ6 481 aa33.32■■■□□ 2.92
FANCA-228ENST00000567943 EIF5P55010 431 aaKnown RBP33.32■■■□□ 2.92
FANCA-228ENST00000567943 TEX13AQ9BXU3 409 aaPredicted RBP33.32■■■□□ 2.92
FANCA-228ENST00000567943 NARFQ9UHQ1 456 aa33.32■■■□□ 2.92
FANCA-228ENST00000567943 TM4SF1P30408 202 aa33.31■■■□□ 2.92
FANCA-228ENST00000567943 BCL2L12Q9HB09 334 aa33.31■■■□□ 2.92
FANCA-228ENST00000567943 KDM3BQ7LBC6 1761 aa33.3■■■□□ 2.92
FANCA-228ENST00000567943 TAF7Q15545 349 aaPredicted RBP33.3■■■□□ 2.92
FANCA-228ENST00000567943 MIS18AQ9NYP9 233 aa33.3■■■□□ 2.92
FANCA-228ENST00000567943 PARP3Q9Y6F1 533 aa33.3■■■□□ 2.92
FANCA-228ENST00000567943 PXDNLA1KZ92 1463 aa33.3■■■□□ 2.92
FANCA-228ENST00000567943 MAPK8IP3Q9UPT6 1336 aa33.29■■■□□ 2.92
FANCA-228ENST00000567943 ZPR1O75312 459 aa33.29■■■□□ 2.92
FANCA-228ENST00000567943 A1BGP04217 495 aa33.29■■■□□ 2.92
FANCA-228ENST00000567943 THUMPD2Q9BTF0 503 aaKnown RBP33.29■■■□□ 2.92
FANCA-228ENST00000567943 USP16Q9Y5T5 823 aa33.29■■■□□ 2.92
FANCA-228ENST00000567943 WWC3Q9ULE0 1092 aa33.27■■■□□ 2.92
FANCA-228ENST00000567943 AFDNP55196 1824 aaKnown RBP33.26■■■□□ 2.92
FANCA-228ENST00000567943 POLRMTO00411 1230 aaKnown RBP33.26■■■□□ 2.91
FANCA-228ENST00000567943 BRCA1P38398 1863 aaKnown RBP33.25■■■□□ 2.91
FANCA-228ENST00000567943 WDR43Q15061 677 aaKnown RBP eCLIP33.24■■■□□ 2.91
FANCA-228ENST00000567943 SCN7AQ01118 1682 aa33.23■■■□□ 2.91
FANCA-228ENST00000567943 GRIN3BO60391 1043 aa33.23■■■□□ 2.91
FANCA-228ENST00000567943 SNRPA1P09661 255 aaKnown RBP33.23■■■□□ 2.91
FANCA-228ENST00000567943 IL6STP40189 918 aaPredicted RBP33.23■■■□□ 2.91
FANCA-228ENST00000567943 NFIXQ14938 502 aa33.23■■■□□ 2.91
FANCA-228ENST00000567943 NRXN2Q9P2S2 1712 aa33.22■■■□□ 2.91
FANCA-228ENST00000567943 TGFB2P61812 414 aa33.22■■■□□ 2.91
FANCA-228ENST00000567943 A0A0G2JLW4 131 aa33.21■■■□□ 2.91
FANCA-228ENST00000567943 PIP4K2AP48426 406 aaPredicted RBP33.21■■■□□ 2.91
FANCA-228ENST00000567943 TMPOP42166 694 aaKnown RBP33.2■■■□□ 2.91
FANCA-228ENST00000567943 CCDC146Q8IYE0 955 aa33.2■■■□□ 2.91
FANCA-228ENST00000567943 LAMB4A4D0S4 1761 aa33.19■■■□□ 2.9
FANCA-228ENST00000567943 A0A087WZG4 1122 aa33.19■■■□□ 2.9
FANCA-228ENST00000567943 RIPK4P57078 832 aa33.19■■■□□ 2.9
FANCA-228ENST00000567943 ADAMTS8Q9UP79 889 aa33.19■■■□□ 2.9
FANCA-228ENST00000567943 TBC1D2BQ9UPU7 963 aa33.19■■■□□ 2.9
FANCA-228ENST00000567943 DPEP1P16444 411 aa33.18■■■□□ 2.9
FANCA-228ENST00000567943 ZNF330Q9Y3S2 320 aaPredicted RBP33.18■■■□□ 2.9
FANCA-228ENST00000567943 BCORQ6W2J9 1755 aa33.17■■■□□ 2.9
FANCA-228ENST00000567943 KCNA3P22001 575 aa33.17■■■□□ 2.9
FANCA-228ENST00000567943 ZNF784Q8NCA9 323 aaPredicted RBP33.17■■■□□ 2.9
FANCA-228ENST00000567943 NBPF26B4DH59 902 aa33.16■■■□□ 2.9
FANCA-228ENST00000567943 NBPF10Q6P3W6 841 aaKnown RBP33.16■■■□□ 2.9
FANCA-228ENST00000567943 NBPF15Q8N660 670 aa33.16■■■□□ 2.9
FANCA-228ENST00000567943 PNISRQ8TF01 805 aaKnown RBP33.16■■■□□ 2.9
FANCA-228ENST00000567943 RRP7AQ9Y3A4 280 aaKnown RBP33.16■■■□□ 2.9
FANCA-228ENST00000567943 EIF4A1P60842 406 aaKnown RBP33.14■■■□□ 2.9
FANCA-228ENST00000567943 CAMTA2O94983 1202 aa33.13■■■□□ 2.89
FANCA-228ENST00000567943 TBC1D9BQ66K14 1250 aa33.13■■■□□ 2.89
FANCA-228ENST00000567943 RUNDC1Q96C34 613 aa33.13■■■□□ 2.89
FANCA-228ENST00000567943 GIGYF1O75420 1035 aaPredicted RBP33.12■■■□□ 2.89
FANCA-228ENST00000567943 ANP32CO43423 234 aa33.11■■■□□ 2.89
FANCA-228ENST00000567943 SERPINB2P05120 415 aa33.11■■■□□ 2.89
FANCA-228ENST00000567943 BICDL1Q6ZP65 573 aa33.11■■■□□ 2.89
FANCA-228ENST00000567943 DZIP3Q86Y13 1208 aaKnown RBP33.09■■■□□ 2.89
FANCA-228ENST00000567943 TRIM35Q9UPQ4 493 aa33.09■■■□□ 2.89
FANCA-228ENST00000567943 ARFGEF1Q9Y6D6 1849 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 CHRNA5P30532 468 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 NEUROD2Q15784 382 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 CCDC184Q52MB2 194 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 BCS1LQ9Y276 419 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 CARMIL3Q8ND23 1372 aa33.08■■■□□ 2.89
FANCA-228ENST00000567943 ANKRD31Q8N7Z5 1873 aa33.07■■■□□ 2.88
FANCA-228ENST00000567943 TSPYL4Q9UJ04 414 aa33.06■■■□□ 2.88
FANCA-228ENST00000567943 LMOD3Q0VAK6 560 aa33.05■■■□□ 2.88
FANCA-228ENST00000567943 DLEC1Q9Y238 1755 aa33.04■■■□□ 2.88
FANCA-228ENST00000567943 NPM2Q86SE8 214 aaKnown RBP33.03■■■□□ 2.88
FANCA-228ENST00000567943 PIM2Q9P1W9 311 aa33.03■■■□□ 2.88
FANCA-228ENST00000567943 BABAM1Q9NWV8 329 aa33.01■■■□□ 2.87
FANCA-228ENST00000567943 ADCY9O60503 1353 aa32.99■■■□□ 2.87
FANCA-228ENST00000567943 PRR5LQ6MZQ0 368 aa32.99■■■□□ 2.87
FANCA-228ENST00000567943 CLEC4GQ6UXB4 293 aa32.98■■■□□ 2.87
FANCA-228ENST00000567943 CCDC24Q8N4L8 307 aa32.98■■■□□ 2.87
FANCA-228ENST00000567943 SETDB2Q96T68 719 aa32.98■■■□□ 2.87
FANCA-228ENST00000567943 CHL1O00533 1208 aa32.97■■■□□ 2.87
FANCA-228ENST00000567943 DALRD3Q5D0E6 543 aaKnown RBP32.97■■■□□ 2.87
FANCA-228ENST00000567943 MRS2Q9HD23 443 aa32.96■■■□□ 2.87
FANCA-228ENST00000567943 COL11A2P13942 1736 aaPredicted RBP32.96■■■□□ 2.87
FANCA-228ENST00000567943 NUP98P52948 1817 aa32.95■■■□□ 2.87
FANCA-228ENST00000567943 HLFQ16534 295 aa32.95■■■□□ 2.87
FANCA-228ENST00000567943 APAF1O14727 1248 aa32.94■■■□□ 2.86
FANCA-228ENST00000567943 NGEFQ8N5V2 710 aa32.94■■■□□ 2.86
FANCA-228ENST00000567943 ATP10DQ9P241 1426 aa32.94■■■□□ 2.86
FANCA-228ENST00000567943 RGL2O15211 777 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms