RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DCAF5Q96JK2 942 aa21.86■■□□□ 1.09
CMTM3-214ENST00000567572 RABEP1Q15276 862 aa21.85■■□□□ 1.09
CMTM3-214ENST00000567572 TOM1L2Q6ZVM7 507 aa21.85■■□□□ 1.09
CMTM3-214ENST00000567572 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
CMTM3-214ENST00000567572 CHPF2Q9P2E5 772 aa21.85■■□□□ 1.09
CMTM3-214ENST00000567572 COL22A1Q8NFW1 1626 aaPredicted RBP21.85■■□□□ 1.09
CMTM3-214ENST00000567572 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
CMTM3-214ENST00000567572 CARD10Q9BWT7 1032 aa21.84■■□□□ 1.09
CMTM3-214ENST00000567572 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
CMTM3-214ENST00000567572 SPRYD3Q8NCJ5 442 aa21.83■■□□□ 1.09
CMTM3-214ENST00000567572 GBP4Q96PP9 640 aa21.83■■□□□ 1.09
CMTM3-214ENST00000567572 GNAI3P08754 354 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 ZNF790Q6PG37 636 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 BRPF3Q9ULD4 1205 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 GNAI2P04899 355 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 RAB3GAP1Q15042 981 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
CMTM3-214ENST00000567572 C5P01031 1676 aa21.82■■□□□ 1.08
CMTM3-214ENST00000567572 SHANK3Q9BYB0 1731 aa21.81■■□□□ 1.08
CMTM3-214ENST00000567572 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
CMTM3-214ENST00000567572 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
CMTM3-214ENST00000567572 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
CMTM3-214ENST00000567572 COL14A1Q05707 1796 aaKnown RBP21.79■■□□□ 1.08
CMTM3-214ENST00000567572 FSD2A1L4K1 749 aa21.79■■□□□ 1.08
CMTM3-214ENST00000567572 TRAK2O60296 914 aa21.79■■□□□ 1.08
CMTM3-214ENST00000567572 LARP1Q6PKG0 1096 aaKnown RBP21.79■■□□□ 1.08
CMTM3-214ENST00000567572 ZCRB1Q8TBF4 217 aaKnown RBP21.79■■□□□ 1.08
CMTM3-214ENST00000567572 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 REC8O95072 547 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 IL2RBP14784 551 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 SLC39A6Q13433 755 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 SKOR2Q2VWA4 1001 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-214ENST00000567572 CLEC17AQ6ZS10 378 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 USP26Q9BXU7 913 aa21.78■■□□□ 1.08
CMTM3-214ENST00000567572 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-214ENST00000567572 ADCY9O60503 1353 aa21.77■■□□□ 1.08
CMTM3-214ENST00000567572 HSP90AA1P07900 732 aaKnown RBP21.77■■□□□ 1.08
CMTM3-214ENST00000567572 SDSP20132 328 aa21.77■■□□□ 1.08
CMTM3-214ENST00000567572 STRN4Q9NRL3 753 aa21.77■■□□□ 1.08
CMTM3-214ENST00000567572 GLI3P10071 1580 aa21.77■■□□□ 1.08
CMTM3-214ENST00000567572 GOLGA6L3A6NEY3 463 aa21.76■■□□□ 1.07
CMTM3-214ENST00000567572 ANXA1P04083 346 aa21.76■■□□□ 1.07
CMTM3-214ENST00000567572 EVA1CP58658 441 aa21.76■■□□□ 1.07
CMTM3-214ENST00000567572 PROSER3Q2NL68 480 aa21.76■■□□□ 1.07
CMTM3-214ENST00000567572 TNPO1Q92973 898 aaKnown RBP21.76■■□□□ 1.07
CMTM3-214ENST00000567572 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
CMTM3-214ENST00000567572 DNAAF4Q8WXU2 420 aa21.75■■□□□ 1.07
CMTM3-214ENST00000567572 USP44Q9H0E7 712 aa21.75■■□□□ 1.07
CMTM3-214ENST00000567572 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 NKX1-1Q15270 411 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-214ENST00000567572 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 CABP4P57796 275 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 BEND3Q5T5X7 828 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-214ENST00000567572 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 DDX21Q9NR30 783 aaKnown RBP eCLIP21.74■■□□□ 1.07
CMTM3-214ENST00000567572 HYPKQ9NX55 129 aa21.74■■□□□ 1.07
CMTM3-214ENST00000567572 CD2BP2O95400 341 aaKnown RBP21.73■■□□□ 1.07
CMTM3-214ENST00000567572 PDIA6Q15084 440 aa21.73■■□□□ 1.07
CMTM3-214ENST00000567572 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
CMTM3-214ENST00000567572 AOX1Q06278 1338 aa21.73■■□□□ 1.07
CMTM3-214ENST00000567572 SALL3Q9BXA9 1300 aa21.73■■□□□ 1.07
CMTM3-214ENST00000567572 ERC2O15083 957 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 PDE1AP54750 535 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 OTUD7AQ8TE49 926 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-214ENST00000567572 BTG4Q9NY30 223 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 LAMB4A4D0S4 1761 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 UBR2Q8IWV8 1755 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 ATP8B2P98198 1209 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 TTC5Q8N0Z6 440 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 FAM43AQ8N2R8 423 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 IBTKQ9P2D0 1353 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-214ENST00000567572 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
CMTM3-214ENST00000567572 ERVV-2B6SEH9 535 aa21.71■■□□□ 1.07
CMTM3-214ENST00000567572 ST18O60284 1047 aa21.71■■□□□ 1.07
CMTM3-214ENST00000567572 LRRCC1Q9C099 1032 aa21.71■■□□□ 1.07
CMTM3-214ENST00000567572 PLCH1Q4KWH8 1693 aa21.71■■□□□ 1.07
CMTM3-214ENST00000567572 SMARCA5O60264 1052 aaPredicted RBP21.7■■□□□ 1.07
CMTM3-214ENST00000567572 FMNL2Q96PY5 1086 aa21.7■■□□□ 1.07
CMTM3-214ENST00000567572 LRRFIP2Q9Y608 721 aaKnown RBP21.7■■□□□ 1.07
CMTM3-214ENST00000567572 SNRPA1P09661 255 aaKnown RBP21.7■■□□□ 1.06
CMTM3-214ENST00000567572 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-214ENST00000567572 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
CMTM3-214ENST00000567572 CWC22Q9HCG8 908 aaKnown RBP21.7■■□□□ 1.06
CMTM3-214ENST00000567572 TUBGCP6Q96RT7 1819 aa21.7■■□□□ 1.06
CMTM3-214ENST00000567572 TOGARAM1Q9Y4F4 1720 aa21.69■■□□□ 1.06
CMTM3-214ENST00000567572 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
CMTM3-214ENST00000567572 EPB41L2O43491 1005 aaKnown RBP21.69■■□□□ 1.06
CMTM3-214ENST00000567572 MRE11P49959 708 aa21.69■■□□□ 1.06
CMTM3-214ENST00000567572 NUCB2P80303 420 aa21.69■■□□□ 1.06
CMTM3-214ENST00000567572 RBM42Q9BTD8 480 aaKnown RBP21.69■■□□□ 1.06
CMTM3-214ENST00000567572 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
CMTM3-214ENST00000567572 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
CMTM3-214ENST00000567572 MAP3K2Q9Y2U5 619 aa21.68■■□□□ 1.06
CMTM3-214ENST00000567572 KCPQ6ZWJ8 1503 aa21.67■■□□□ 1.06
CMTM3-214ENST00000567572 PNMA6EA0A0J9YXQ4 647 aa21.67■■□□□ 1.06
CMTM3-214ENST00000567572 ALDH1L1O75891 902 aa21.66■■□□□ 1.06
CMTM3-214ENST00000567572 DDX58O95786 925 aaKnown RBP21.66■■□□□ 1.06
CMTM3-214ENST00000567572 MX1P20591 662 aa21.66■■□□□ 1.06
CMTM3-214ENST00000567572 DDX54Q8TDD1 881 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms