RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	DCTN1	Q14203	1278 aa		12.47	□□□□□ -0.41
KIFC3-231	ENST00000567479	COL5A3	P25940	1745 aa	Predicted RBP	12.47	□□□□□ -0.41
KIFC3-231	ENST00000567479	ADAMTS7	Q9UKP4	1686 aa		12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	DPEP1	P16444	411 aa		12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	EIF5	P55010	431 aa	Known RBP	12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	DDR1	Q08345	913 aa		12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	TAF7	Q15545	349 aa	Predicted RBP	12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	NPM2	Q86SE8	214 aa	Known RBP	12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	PLEKHF1	Q96S99	279 aa		12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	MYH14	Q7Z406	1995 aa	Known RBP	12.46	□□□□□ -0.41
KIFC3-231	ENST00000567479	COL15A1	P39059	1388 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	UTRN	P46939	3433 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	POLRMT	O00411	1230 aa	Known RBP	12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	A1BG	P04217	495 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	IL6ST	P40189	918 aa	Predicted RBP	12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	BCS1L	Q9Y276	419 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	USP16	Q9Y5T5	823 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	TJP1	Q07157	1748 aa		12.45	□□□□□ -0.42
KIFC3-231	ENST00000567479	SNRPA1	P09661	255 aa	Known RBP	12.44	□□□□□ -0.42
KIFC3-231	ENST00000567479	NFIX	Q14938	502 aa		12.44	□□□□□ -0.42
KIFC3-231	ENST00000567479	BCL2L12	Q9HB09	334 aa		12.44	□□□□□ -0.42
KIFC3-231	ENST00000567479	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.44	□□□□□ -0.42
KIFC3-231	ENST00000567479	CIC	Q96RK0	1608 aa	Predicted RBP	12.44	□□□□□ -0.42
KIFC3-231	ENST00000567479	MAPK8IP3	Q9UPT6	1336 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	PXDNL	A1KZ92	1463 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	SERPINB2	P05120	415 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	KCNA3	P22001	575 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	NFE2L2	Q16236	605 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	PNISR	Q8TF01	805 aa	Known RBP	12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	MIS18A	Q9NYP9	233 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	PIM2	Q9P1W9	311 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	TBC1D2B	Q9UPU7	963 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	C10orf71	Q711Q0	1435 aa		12.43	□□□□□ -0.42
KIFC3-231	ENST00000567479	BICDL1	Q6ZP65	573 aa		12.42	□□□□□ -0.42
KIFC3-231	ENST00000567479	ARHGAP27	Q6ZUM4	889 aa		12.42	□□□□□ -0.42
KIFC3-231	ENST00000567479	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.41	□□□□□ -0.42
KIFC3-231	ENST00000567479	GOLGB1	Q14789	3259 aa	Known RBP	12.41	□□□□□ -0.42
KIFC3-231	ENST00000567479	PRAMEF22	A3QJZ6	481 aa		12.41	□□□□□ -0.42
KIFC3-231	ENST00000567479	DALRD3	Q5D0E6	543 aa	Known RBP	12.41	□□□□□ -0.42
KIFC3-231	ENST00000567479	CHD4	Q14839	1912 aa		12.41	□□□□□ -0.42
KIFC3-231	ENST00000567479	C4A	P0C0L4	1744 aa		12.4	□□□□□ -0.42
KIFC3-231	ENST00000567479	CHRNA5	P30532	468 aa		12.4	□□□□□ -0.42
KIFC3-231	ENST00000567479	RIPK4	P57078	832 aa		12.4	□□□□□ -0.42
KIFC3-231	ENST00000567479	TBC1D9B	Q66K14	1250 aa		12.4	□□□□□ -0.42
KIFC3-231	ENST00000567479	DZIP3	Q86Y13	1208 aa	Known RBP	12.4	□□□□□ -0.42
KIFC3-231	ENST00000567479	ZEB1	P37275	1124 aa	Predicted RBP	12.39	□□□□□ -0.43
KIFC3-231	ENST00000567479	PIP4K2A	P48426	406 aa	Predicted RBP	12.39	□□□□□ -0.43
KIFC3-231	ENST00000567479	SETDB2	Q96T68	719 aa		12.39	□□□□□ -0.43
KIFC3-231	ENST00000567479	THUMPD2	Q9BTF0	503 aa	Known RBP	12.39	□□□□□ -0.43
KIFC3-231	ENST00000567479	UBR2	Q8IWV8	1755 aa		12.38	□□□□□ -0.43
KIFC3-231	ENST00000567479	GIGYF1	O75420	1035 aa	Predicted RBP	12.38	□□□□□ -0.43
KIFC3-231	ENST00000567479	CAMTA2	O94983	1202 aa		12.38	□□□□□ -0.43
KIFC3-231	ENST00000567479	VIRMA	Q69YN4	1812 aa	Known RBP	12.38	□□□□□ -0.43
KIFC3-231	ENST00000567479	NBPF26	B4DH59	902 aa		12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479		H0YIN7	160 aa		12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	TMPO	P42166	694 aa	Known RBP	12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	C1QTNF8	P60827	252 aa		12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	EIF4A1	P60842	406 aa	Known RBP	12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	WDR43	Q15061	677 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	NBPF10	Q6P3W6	841 aa	Known RBP	12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	CLEC4G	Q6UXB4	293 aa		12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	NBPF15	Q8N660	670 aa		12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.37	□□□□□ -0.43
KIFC3-231	ENST00000567479	SIPA1L3	O60292	1781 aa	Predicted RBP	12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	NPHP1	O15259	732 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	PDE6B	P35913	854 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	LMOD3	Q0VAK6	560 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	C2CD5	Q86YS7	1000 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	CCDC146	Q8IYE0	955 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	ZNF526	Q8TF50	670 aa	Predicted RBP	12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	PDZRN3	Q9UPQ7	1066 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	ZNF652	Q9Y2D9	606 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	ATP10D	Q9P241	1426 aa		12.36	□□□□□ -0.43
KIFC3-231	ENST00000567479	KIF13B	Q9NQT8	1826 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	NEUROD2	Q15784	382 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	TTLL6	Q8N841	843 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	RUNDC1	Q96C34	613 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	BRIP1	Q9BX63	1249 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	TSPYL4	Q9UJ04	414 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	ADAMTS8	Q9UP79	889 aa		12.35	□□□□□ -0.43
KIFC3-231	ENST00000567479	CARMIL3	Q8ND23	1372 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	RGL2	O15211	777 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	PRR5L	Q6MZQ0	368 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	CCDC24	Q8N4L8	307 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	NGEF	Q8N5V2	710 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	BABAM1	Q9NWV8	329 aa		12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	RRP7A	Q9Y3A4	280 aa	Known RBP	12.34	□□□□□ -0.43
KIFC3-231	ENST00000567479	ADCY9	O60503	1353 aa		12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	ST5	P78524	1137 aa		12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	C9orf131	Q5VYM1	1079 aa		12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	TPTE2	Q6XPS3	522 aa		12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	CNBD1	Q8NA66	436 aa		12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
KIFC3-231	ENST00000567479	KIAA1551	Q9HCM1	1747 aa		12.32	□□□□□ -0.44
KIFC3-231	ENST00000567479	MYL6B	P14649	208 aa		12.32	□□□□□ -0.44
KIFC3-231	ENST00000567479	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
KIFC3-231	ENST00000567479	ERVV-1	B6SEH8	477 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms