RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	MIS18A	Q9NYP9	233 aa		32.42	■■■□□ 2.78
PPP4C-209	ENST00000566749	PNISR	Q8TF01	805 aa	Known RBP	32.42	■■■□□ 2.78
PPP4C-209	ENST00000566749	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.41	■■■□□ 2.78
PPP4C-209	ENST00000566749	MRS2	Q9HD23	443 aa		32.41	■■■□□ 2.78
PPP4C-209	ENST00000566749	ZBTB1	Q9Y2K1	713 aa		32.39	■■■□□ 2.78
PPP4C-209	ENST00000566749	C4A	P0C0L4	1744 aa		32.37	■■■□□ 2.77
PPP4C-209	ENST00000566749	KLHL34	Q8N239	644 aa		32.37	■■■□□ 2.77
PPP4C-209	ENST00000566749	SOS1	Q07889	1333 aa	Predicted RBP	32.36	■■■□□ 2.77
PPP4C-209	ENST00000566749	CANX	P27824	592 aa	Known RBP	32.36	■■■□□ 2.77
PPP4C-209	ENST00000566749	SNRPA1	P09661	255 aa	Known RBP	32.35	■■■□□ 2.77
PPP4C-209	ENST00000566749	SYT17	Q9BSW7	474 aa		32.35	■■■□□ 2.77
PPP4C-209	ENST00000566749	KDM3B	Q7LBC6	1761 aa		32.35	■■■□□ 2.77
PPP4C-209	ENST00000566749	NLGN1	Q8N2Q7	840 aa		32.33	■■■□□ 2.77
PPP4C-209	ENST00000566749	PRAMEF22	A3QJZ6	481 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	APAF1	O14727	1248 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	GYS1	P13807	737 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	TRIM35	Q9UPQ4	493 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	USP16	Q9Y5T5	823 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	COL15A1	P39059	1388 aa		32.32	■■■□□ 2.76
PPP4C-209	ENST00000566749	SRP68	Q9UHB9	627 aa	Known RBP	32.31	■■■□□ 2.76
PPP4C-209	ENST00000566749	TSPYL4	Q9UJ04	414 aa		32.31	■■■□□ 2.76
PPP4C-209	ENST00000566749	USP42	Q9H9J4	1324 aa	Known RBP	32.31	■■■□□ 2.76
PPP4C-209	ENST00000566749	ZPR1	O75312	459 aa		32.29	■■■□□ 2.76
PPP4C-209	ENST00000566749	A1BG	P04217	495 aa		32.29	■■■□□ 2.76
PPP4C-209	ENST00000566749	MMP10	P09238	476 aa		32.29	■■■□□ 2.76
PPP4C-209	ENST00000566749	EIF4A1	P60842	406 aa	Known RBP	32.28	■■■□□ 2.76
PPP4C-209	ENST00000566749	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.28	■■■□□ 2.76
PPP4C-209	ENST00000566749	EIF5	P55010	431 aa	Known RBP	32.27	■■■□□ 2.76
PPP4C-209	ENST00000566749	BABAM1	Q9NWV8	329 aa		32.27	■■■□□ 2.76
PPP4C-209	ENST00000566749	USPL1	Q5W0Q7	1092 aa		32.26	■■■□□ 2.75
PPP4C-209	ENST00000566749	NPM2	Q86SE8	214 aa	Known RBP	32.26	■■■□□ 2.75
PPP4C-209	ENST00000566749	IL6ST	P40189	918 aa	Predicted RBP	32.25	■■■□□ 2.75
PPP4C-209	ENST00000566749	NARF	Q9UHQ1	456 aa		32.25	■■■□□ 2.75
PPP4C-209	ENST00000566749		A0A087WZG4	1122 aa		32.24	■■■□□ 2.75
PPP4C-209	ENST00000566749	LAS1L	Q9Y4W2	734 aa	Known RBP	32.24	■■■□□ 2.75
PPP4C-209	ENST00000566749	DCAF8L1	A6NGE4	600 aa		32.23	■■■□□ 2.75
PPP4C-209	ENST00000566749	GIGYF1	O75420	1035 aa	Predicted RBP	32.23	■■■□□ 2.75
PPP4C-209	ENST00000566749	FKBP8	Q14318	412 aa		32.23	■■■□□ 2.75
PPP4C-209	ENST00000566749	PIP4K2A	P48426	406 aa	Predicted RBP	32.22	■■■□□ 2.75
PPP4C-209	ENST00000566749	LAMB4	A4D0S4	1761 aa		32.21	■■■□□ 2.75
PPP4C-209	ENST00000566749	NLGN2	Q8NFZ4	835 aa		32.2	■■■□□ 2.75
PPP4C-209	ENST00000566749	CD2AP	Q9Y5K6	639 aa		32.2	■■■□□ 2.75
PPP4C-209	ENST00000566749	PARP3	Q9Y6F1	533 aa		32.2	■■■□□ 2.75
PPP4C-209	ENST00000566749	CHL1	O00533	1208 aa		32.19	■■■□□ 2.74
PPP4C-209	ENST00000566749	TBC1D2B	Q9UPU7	963 aa		32.18	■■■□□ 2.74
PPP4C-209	ENST00000566749	SENP3-EIF4A1	A0A087X0R7	540 aa		32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	NBPF26	B4DH59	902 aa		32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	CALD1	Q05682	793 aa	Known RBP	32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	NBPF10	Q6P3W6	841 aa	Known RBP	32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	FAM9B	Q8IZU0	186 aa		32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	NBPF15	Q8N660	670 aa		32.16	■■■□□ 2.74
PPP4C-209	ENST00000566749	CFAP44	Q96MT7	982 aa		32.15	■■■□□ 2.74
PPP4C-209	ENST00000566749	BCL2L12	Q9HB09	334 aa		32.15	■■■□□ 2.74
PPP4C-209	ENST00000566749	DZIP3	Q86Y13	1208 aa	Known RBP	32.14	■■■□□ 2.74
PPP4C-209	ENST00000566749	TM4SF1	P30408	202 aa		32.13	■■■□□ 2.73
PPP4C-209	ENST00000566749	DDR1	Q08345	913 aa		32.13	■■■□□ 2.73
PPP4C-209	ENST00000566749	SCN7A	Q01118	1682 aa		32.11	■■■□□ 2.73
PPP4C-209	ENST00000566749	NFIX	Q14938	502 aa		32.1	■■■□□ 2.73
PPP4C-209	ENST00000566749	POLRMT	O00411	1230 aa	Known RBP	32.1	■■■□□ 2.73
PPP4C-209	ENST00000566749	EIF2S2	P20042	333 aa	Known RBP	32.1	■■■□□ 2.73
PPP4C-209	ENST00000566749	IFT57	Q9NWB7	429 aa		32.1	■■■□□ 2.73
PPP4C-209	ENST00000566749	CAMTA2	O94983	1202 aa		32.09	■■■□□ 2.73
PPP4C-209	ENST00000566749	GNAI1	P63096	354 aa		32.09	■■■□□ 2.73
PPP4C-209	ENST00000566749	BICDL1	Q6ZP65	573 aa		32.09	■■■□□ 2.73
PPP4C-209	ENST00000566749	PELP1	Q8IZL8	1130 aa	Known RBP	32.09	■■■□□ 2.73
PPP4C-209	ENST00000566749	GPR162	Q16538	588 aa		32.08	■■■□□ 2.73
PPP4C-209	ENST00000566749	CCDC27	Q2M243	656 aa		32.08	■■■□□ 2.73
PPP4C-209	ENST00000566749	MBIP	Q9NS73	344 aa		32.08	■■■□□ 2.73
PPP4C-209	ENST00000566749	ZNF853	P0CG23	659 aa		32.07	■■■□□ 2.72
PPP4C-209	ENST00000566749	MYL6B	P14649	208 aa		32.07	■■■□□ 2.72
PPP4C-209	ENST00000566749	KRT24	Q2M2I5	525 aa		32.07	■■■□□ 2.72
PPP4C-209	ENST00000566749	NGEF	Q8N5V2	710 aa		32.07	■■■□□ 2.72
PPP4C-209	ENST00000566749	C10orf71	Q711Q0	1435 aa		32.07	■■■□□ 2.72
PPP4C-209	ENST00000566749	KIF13B	Q9NQT8	1826 aa		32.06	■■■□□ 2.72
PPP4C-209	ENST00000566749	ERBB4	Q15303	1308 aa		32.06	■■■□□ 2.72
PPP4C-209	ENST00000566749	TBC1D9B	Q66K14	1250 aa		32.05	■■■□□ 2.72
PPP4C-209	ENST00000566749	WWC1	Q8IX03	1113 aa		32.05	■■■□□ 2.72
PPP4C-209	ENST00000566749	BCOR	Q6W2J9	1755 aa		32.05	■■■□□ 2.72
PPP4C-209	ENST00000566749	NCBP3	Q53F19	620 aa	Known RBP	32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	SALL2	Q9Y467	1007 aa	Predicted RBP	32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	GOLGB1	Q14789	3259 aa	Known RBP	32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	SERPINB2	P05120	415 aa		32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	NECTIN2	Q92692	538 aa		32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	ZNF652	Q9Y2D9	606 aa		32.03	■■■□□ 2.72
PPP4C-209	ENST00000566749	TGFB2	P61812	414 aa		32.02	■■■□□ 2.72
PPP4C-209	ENST00000566749	AFDN	P55196	1824 aa	Known RBP	32.01	■■■□□ 2.72
PPP4C-209	ENST00000566749	CLEC4G	Q6UXB4	293 aa		32.01	■■■□□ 2.71
PPP4C-209	ENST00000566749	UTRN	P46939	3433 aa		32.01	■■■□□ 2.71
PPP4C-209	ENST00000566749	SETDB2	Q96T68	719 aa		32	■■■□□ 2.71
PPP4C-209	ENST00000566749	HOXB7	P09629	217 aa		31.99	■■■□□ 2.71
PPP4C-209	ENST00000566749	KIF6	Q6ZMV9	814 aa		31.99	■■■□□ 2.71
PPP4C-209	ENST00000566749	PXDNL	A1KZ92	1463 aa		31.99	■■■□□ 2.71
PPP4C-209	ENST00000566749	DUSP27	Q5VZP5	1158 aa		31.98	■■■□□ 2.71
PPP4C-209	ENST00000566749	WWC3	Q9ULE0	1092 aa		31.98	■■■□□ 2.71
PPP4C-209	ENST00000566749	CARMIL3	Q8ND23	1372 aa		31.98	■■■□□ 2.71
PPP4C-209	ENST00000566749	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.98	■■■□□ 2.71
PPP4C-209	ENST00000566749	PDIA6	Q15084	440 aa		31.97	■■■□□ 2.71
PPP4C-209	ENST00000566749	HDGFL1	Q5TGJ6	251 aa		31.97	■■■□□ 2.71
PPP4C-209	ENST00000566749	NRXN2	Q9P2S2	1712 aa		31.97	■■■□□ 2.71
PPP4C-209	ENST00000566749		A0A0G2JLW4	131 aa		31.97	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms