RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 NEK4P51957 841 aa18.62■□□□□ 0.57
HERC2-207ENST00000564734 MCTP1Q6DN14 999 aa18.62■□□□□ 0.57
HERC2-207ENST00000564734 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
HERC2-207ENST00000564734 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
HERC2-207ENST00000564734 EPB41L2O43491 1005 aaKnown RBP18.61■□□□□ 0.57
HERC2-207ENST00000564734 CUL4AQ13619 759 aa18.61■□□□□ 0.57
HERC2-207ENST00000564734 TMX3Q96JJ7 454 aa18.61■□□□□ 0.57
HERC2-207ENST00000564734 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
HERC2-207ENST00000564734 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
HERC2-207ENST00000564734 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
HERC2-207ENST00000564734 MCM2P49736 904 aa18.61■□□□□ 0.57
HERC2-207ENST00000564734 PSME1Q06323 249 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
HERC2-207ENST00000564734 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 PI4K2BQ8TCG2 481 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 DNAAF4Q8WXU2 420 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
HERC2-207ENST00000564734 RHPN1Q8TCX5 695 aa18.6■□□□□ 0.57
HERC2-207ENST00000564734 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
HERC2-207ENST00000564734 SLIT3O75094 1523 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 MCCP23508 829 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 IL25Q9H293 177 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 ADCY9O60503 1353 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
HERC2-207ENST00000564734 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
HERC2-207ENST00000564734 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.57
HERC2-207ENST00000564734 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.57
HERC2-207ENST00000564734 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.57
HERC2-207ENST00000564734 ZNF445P59923 1031 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 PLEKHO1Q53GL0 409 aaPredicted RBP18.58■□□□□ 0.56
HERC2-207ENST00000564734 LMOD2Q6P5Q4 547 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 ZNF530Q6P9A1 599 aaPredicted RBP18.58■□□□□ 0.56
HERC2-207ENST00000564734 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 BTBD11A6QL63 1104 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 HEG1Q9ULI3 1381 aa18.58■□□□□ 0.56
HERC2-207ENST00000564734 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
HERC2-207ENST00000564734 PXDNQ92626 1479 aa18.57■□□□□ 0.56
HERC2-207ENST00000564734 SRGAP3O43295 1099 aa18.57■□□□□ 0.56
HERC2-207ENST00000564734 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
HERC2-207ENST00000564734 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
HERC2-207ENST00000564734 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
HERC2-207ENST00000564734 CLCN1P35523 988 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
HERC2-207ENST00000564734 CAMTA1Q9Y6Y1 1673 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 GCP02774 474 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 HSPA4P34932 840 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 TEFQ10587 303 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 MTX1Q13505 466 aa18.56■□□□□ 0.56
HERC2-207ENST00000564734 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
HERC2-207ENST00000564734 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
HERC2-207ENST00000564734 BRD1O95696 1058 aa18.54■□□□□ 0.56
HERC2-207ENST00000564734 ANXA1P04083 346 aa18.54■□□□□ 0.56
HERC2-207ENST00000564734 GPT2Q8TD30 523 aa18.54■□□□□ 0.56
HERC2-207ENST00000564734 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
HERC2-207ENST00000564734 DBF4Q9UBU7 674 aaPredicted RBP18.54■□□□□ 0.56
HERC2-207ENST00000564734 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
HERC2-207ENST00000564734 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
HERC2-207ENST00000564734 SGSM2O43147 1006 aa18.53■□□□□ 0.56
HERC2-207ENST00000564734 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
HERC2-207ENST00000564734 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
HERC2-207ENST00000564734 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
HERC2-207ENST00000564734 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
HERC2-207ENST00000564734 HSP90AB4PQ58FF6 505 aa18.52■□□□□ 0.56
HERC2-207ENST00000564734 CAVIN1Q6NZI2 390 aaKnown RBP18.52■□□□□ 0.56
HERC2-207ENST00000564734 ALDH1L1O75891 902 aa18.52■□□□□ 0.55
HERC2-207ENST00000564734 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.55
HERC2-207ENST00000564734 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.55
HERC2-207ENST00000564734 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 RAD50Q92878 1312 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 LSG1Q9H089 658 aaKnown RBP18.51■□□□□ 0.55
HERC2-207ENST00000564734 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
HERC2-207ENST00000564734 PIP4K2BP78356 416 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 PROSER3Q2NL68 480 aa18.51■□□□□ 0.55
HERC2-207ENST00000564734 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
HERC2-207ENST00000564734 NASPP49321 788 aaPredicted RBP18.5■□□□□ 0.55
HERC2-207ENST00000564734 C1orf141Q5JVX7 400 aa18.5■□□□□ 0.55
HERC2-207ENST00000564734 TTC41PQ6P2S7 1318 aa18.5■□□□□ 0.55
HERC2-207ENST00000564734 KSR2Q6VAB6 950 aa18.5■□□□□ 0.55
HERC2-207ENST00000564734 UPF3BQ9BZI7 483 aaKnown RBP18.5■□□□□ 0.55
HERC2-207ENST00000564734 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
HERC2-207ENST00000564734 CCDC173Q0VFZ6 552 aa18.49■□□□□ 0.55
HERC2-207ENST00000564734 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
HERC2-207ENST00000564734 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
HERC2-207ENST00000564734 ESPNB1AK53 854 aa18.49■□□□□ 0.55
HERC2-207ENST00000564734 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
HERC2-207ENST00000564734 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
HERC2-207ENST00000564734 MST1RQ04912 1400 aa18.48■□□□□ 0.55
HERC2-207ENST00000564734 PRAMEF22A3QJZ6 481 aa18.48■□□□□ 0.55
HERC2-207ENST00000564734 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
HERC2-207ENST00000564734 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
HERC2-207ENST00000564734 TTC14Q96N46 770 aa18.48■□□□□ 0.55
HERC2-207ENST00000564734 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
HERC2-207ENST00000564734 UTYO14607 1347 aa18.47■□□□□ 0.55
HERC2-207ENST00000564734 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms