RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 LGR6Q9HBX8 967 aa9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PLSCR1O15162 318 aa9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SSH1Q8WYL5 1049 aa9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 FOXD4L1Q9NU39 408 aa9.45□□□□□ -0.9
MAP1LC3B-205ENST00000564638 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ZBTB7AO95365 584 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ZNF853P0CG23 659 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 KCNQ4P56696 695 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TEFQ10587 303 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 DCTN1Q14203 1278 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 MCM10Q7L590 875 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PROM2Q8N271 834 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 NFATC2IPQ8NCF5 419 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ASAP1Q9ULH1 1129 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 LY75O60449 1722 aa9.44□□□□□ -0.9
MAP1LC3B-205ENST00000564638 RLBP1P12271 317 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ATF7IPQ6VMQ6 1270 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 IL17REQ8NFR9 667 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SLC52A2Q9HAB3 445 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 MRC1P22897 1456 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TRIM27P14373 513 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SLC39A6Q13433 755 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ATF5Q9Y2D1 282 aaPredicted RBP9.42□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SLC4A2P04920 1241 aa9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SIPA1L3O60292 1781 aaPredicted RBP9.41□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 C5P01031 1676 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 HTATSF1O43719 755 aaKnown RBP9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 VAMP4O75379 141 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PDE4AP27815 886 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SIK1P57059 783 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 TTC5Q8N0Z6 440 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 RWDD1Q9H446 243 aaPredicted RBP9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 CACNA1FO60840 1977 aa9.4□□□□□ -0.9
MAP1LC3B-205ENST00000564638 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 PAPPAQ13219 1627 aa9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 BACH2Q9BYV9 841 aa9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 API5Q9BZZ5 524 aaKnown RBP9.39□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 CHL1O00533 1208 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 IGHDP01880 384 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 RGS3P49796 1198 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ABCC4O15439 1325 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 KCNQ3O43525 872 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SLC34A2O95436 690 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ITPK1Q13572 414 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TAF7Q15545 349 aaPredicted RBP9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 SLC15A2Q16348 729 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 LINC00116Q8NCU8 138 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 AK7Q96M32 723 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 MIS18AQ9NYP9 233 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TFCP2L1Q9NZI6 479 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
MAP1LC3B-205ENST00000564638 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 TJP1Q07157 1748 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 KCPQ6ZWJ8 1503 aa9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 ELL2O00472 640 aaPredicted RBP9.36□□□□□ -0.91
MAP1LC3B-205ENST00000564638 HSPA6P17066 643 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms