RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
HERC2-206ENST00000564519 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
HERC2-206ENST00000564519 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
HERC2-206ENST00000564519 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
HERC2-206ENST00000564519 SIPA1L3O60292 1781 aaPredicted RBP16.85■□□□□ 0.29
HERC2-206ENST00000564519 TGFB2P61812 414 aa16.85■□□□□ 0.29
HERC2-206ENST00000564519 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
HERC2-206ENST00000564519 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
HERC2-206ENST00000564519 HSPA6P17066 643 aa16.84■□□□□ 0.29
HERC2-206ENST00000564519 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
HERC2-206ENST00000564519 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
HERC2-206ENST00000564519 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
HERC2-206ENST00000564519 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
HERC2-206ENST00000564519 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
HERC2-206ENST00000564519 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
HERC2-206ENST00000564519 ADCY9O60503 1353 aa16.83■□□□□ 0.28
HERC2-206ENST00000564519 STARD3NLO95772 234 aa16.83■□□□□ 0.28
HERC2-206ENST00000564519 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
HERC2-206ENST00000564519 COL15A1P39059 1388 aa16.83■□□□□ 0.28
HERC2-206ENST00000564519 DDR1Q08345 913 aa16.83■□□□□ 0.28
HERC2-206ENST00000564519 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
HERC2-206ENST00000564519 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
HERC2-206ENST00000564519 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
HERC2-206ENST00000564519 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
HERC2-206ENST00000564519 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 A1BGP04217 495 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 NEFMP07197 916 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
HERC2-206ENST00000564519 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
HERC2-206ENST00000564519 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
HERC2-206ENST00000564519 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
HERC2-206ENST00000564519 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
HERC2-206ENST00000564519 ZPR1O75312 459 aa16.8■□□□□ 0.28
HERC2-206ENST00000564519 TM4SF1P30408 202 aa16.8■□□□□ 0.28
HERC2-206ENST00000564519 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
HERC2-206ENST00000564519 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
HERC2-206ENST00000564519 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
HERC2-206ENST00000564519 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
HERC2-206ENST00000564519 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
HERC2-206ENST00000564519 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
HERC2-206ENST00000564519 NFIXQ14938 502 aa16.78■□□□□ 0.28
HERC2-206ENST00000564519 CCDC146Q8IYE0 955 aa16.78■□□□□ 0.28
HERC2-206ENST00000564519 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
HERC2-206ENST00000564519 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
HERC2-206ENST00000564519 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
HERC2-206ENST00000564519 DPEP1P16444 411 aa16.77■□□□□ 0.28
HERC2-206ENST00000564519 KIF3CO14782 793 aa16.76■□□□□ 0.27
HERC2-206ENST00000564519 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
HERC2-206ENST00000564519 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
HERC2-206ENST00000564519 A0A087WZG4 1122 aa16.75■□□□□ 0.27
HERC2-206ENST00000564519 RIPK4P57078 832 aa16.75■□□□□ 0.27
HERC2-206ENST00000564519 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
HERC2-206ENST00000564519 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
HERC2-206ENST00000564519 KIAA1551Q9HCM1 1747 aa16.75■□□□□ 0.27
HERC2-206ENST00000564519 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 TOMM70O94826 608 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
HERC2-206ENST00000564519 APLP1P51693 650 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
HERC2-206ENST00000564519 BICDL1Q6ZP65 573 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 ADAMTS8Q9UP79 889 aa16.74■□□□□ 0.27
HERC2-206ENST00000564519 KCNA3P22001 575 aa16.73■□□□□ 0.27
HERC2-206ENST00000564519 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
HERC2-206ENST00000564519 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
HERC2-206ENST00000564519 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
HERC2-206ENST00000564519 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
HERC2-206ENST00000564519 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
HERC2-206ENST00000564519 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
HERC2-206ENST00000564519 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
HERC2-206ENST00000564519 SERPINB2P05120 415 aa16.72■□□□□ 0.27
HERC2-206ENST00000564519 CHRNA5P30532 468 aa16.72■□□□□ 0.27
HERC2-206ENST00000564519 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
HERC2-206ENST00000564519 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
HERC2-206ENST00000564519 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
HERC2-206ENST00000564519 RUNDC1Q96C34 613 aa16.71■□□□□ 0.27
HERC2-206ENST00000564519 N4BP2Q86UW6 1770 aaPredicted RBP16.7■□□□□ 0.26
HERC2-206ENST00000564519 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
HERC2-206ENST00000564519 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
HERC2-206ENST00000564519 DZIP3Q86Y13 1208 aaKnown RBP16.7■□□□□ 0.26
HERC2-206ENST00000564519 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
HERC2-206ENST00000564519 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
HERC2-206ENST00000564519 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
HERC2-206ENST00000564519 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
HERC2-206ENST00000564519 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
HERC2-206ENST00000564519 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
HERC2-206ENST00000564519 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
HERC2-206ENST00000564519 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
HERC2-206ENST00000564519 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
HERC2-206ENST00000564519 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
HERC2-206ENST00000564519 HLFQ16534 295 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms