RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 NFATC2IPQ8NCF5 419 aa11.59□□□□□ -0.55
PKM-212ENST00000564440 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
PKM-212ENST00000564440 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
PKM-212ENST00000564440 BECN1Q14457 450 aa11.59□□□□□ -0.55
PKM-212ENST00000564440 TJP1Q07157 1748 aa11.59□□□□□ -0.55
PKM-212ENST00000564440 PTCD1O75127 700 aaKnown RBP11.58□□□□□ -0.56
PKM-212ENST00000564440 EVA1CP58658 441 aa11.58□□□□□ -0.56
PKM-212ENST00000564440 GNAI1P63096 354 aa11.58□□□□□ -0.56
PKM-212ENST00000564440 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
PKM-212ENST00000564440 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
PKM-212ENST00000564440 PROSER3Q2NL68 480 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 MYL6BP14649 208 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 KCNQ4P56696 695 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 TEFQ10587 303 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
PKM-212ENST00000564440 IL2RBP14784 551 aa11.56□□□□□ -0.56
PKM-212ENST00000564440 L1TD1Q5T7N2 865 aaKnown RBP11.56□□□□□ -0.56
PKM-212ENST00000564440 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
PKM-212ENST00000564440 CEMIPQ8WUJ3 1361 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
PKM-212ENST00000564440 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
PKM-212ENST00000564440 IFT57Q9NWB7 429 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 FKBP5Q13451 457 aaPredicted RBP11.55□□□□□ -0.56
PKM-212ENST00000564440 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
PKM-212ENST00000564440 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
PKM-212ENST00000564440 CHL1O00533 1208 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 LNPKQ9C0E8 428 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 PCDH11XQ9BZA7 1347 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 CYP27B1O15528 508 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 MVPQ14764 893 aaKnown RBP11.54□□□□□ -0.56
PKM-212ENST00000564440 MEIS3Q99687 375 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 TSHZ3Q63HK5 1081 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
PKM-212ENST00000564440 GAS2L2Q8NHY3 880 aa11.53□□□□□ -0.56
PKM-212ENST00000564440 PCNTO95613 3336 aa11.53□□□□□ -0.56
PKM-212ENST00000564440 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
PKM-212ENST00000564440 SEC24BO95487 1268 aa11.53□□□□□ -0.56
PKM-212ENST00000564440 CACNA1FO60840 1977 aa11.53□□□□□ -0.56
PKM-212ENST00000564440 HMGB2P26583 209 aaKnown RBP11.52□□□□□ -0.56
PKM-212ENST00000564440 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.56
PKM-212ENST00000564440 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.56
PKM-212ENST00000564440 SMARCA5O60264 1052 aaPredicted RBP11.52□□□□□ -0.57
PKM-212ENST00000564440 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
PKM-212ENST00000564440 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
PKM-212ENST00000564440 UPF2Q9HAU5 1272 aaKnown RBP11.52□□□□□ -0.57
PKM-212ENST00000564440 LRP5O75197 1615 aa11.52□□□□□ -0.57
PKM-212ENST00000564440 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
PKM-212ENST00000564440 C16orf71Q8IYS4 520 aaPredicted RBP11.51□□□□□ -0.57
PKM-212ENST00000564440 BABAM1Q9NWV8 329 aa11.51□□□□□ -0.57
PKM-212ENST00000564440 PDE3AQ14432 1141 aa11.51□□□□□ -0.57
PKM-212ENST00000564440 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
PKM-212ENST00000564440 RRAGDQ9NQL2 400 aaPredicted RBP11.51□□□□□ -0.57
PKM-212ENST00000564440 N4BP2Q86UW6 1770 aaPredicted RBP11.5□□□□□ -0.57
PKM-212ENST00000564440 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 FAM196AQ6ZSG2 479 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
PKM-212ENST00000564440 RNMTO43148 476 aaKnown RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
PKM-212ENST00000564440 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
PKM-212ENST00000564440 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 TATP17735 454 aaPredicted RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
PKM-212ENST00000564440 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
PKM-212ENST00000564440 ERVV-2B6SEH9 535 aa11.48□□□□□ -0.57
PKM-212ENST00000564440 PTF1AQ7RTS3 328 aa11.48□□□□□ -0.57
PKM-212ENST00000564440 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
PKM-212ENST00000564440 ANTXR1Q9H6X2 564 aa11.48□□□□□ -0.57
PKM-212ENST00000564440 PLSCR1O15162 318 aa11.48□□□□□ -0.57
PKM-212ENST00000564440 ANKRD45Q5TZF3 282 aa11.48□□□□□ -0.57
PKM-212ENST00000564440 ZCRB1Q8TBF4 217 aaKnown RBP11.48□□□□□ -0.57
PKM-212ENST00000564440 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 FLIIQ13045 1269 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 AKAP4Q5JQC9 854 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 HEG1Q9ULI3 1381 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 PHKG2P15735 406 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 DDB1Q16531 1140 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
PKM-212ENST00000564440 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
PKM-212ENST00000564440 EXOC6BQ9Y2D4 811 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
PKM-212ENST00000564440 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
PKM-212ENST00000564440 SCN7AQ01118 1682 aa11.46□□□□□ -0.57
PKM-212ENST00000564440 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms