RNA–Protein interactions for RNA: ENST00000564276.1

PKM-211, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-211ENST00000564276 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
PKM-211ENST00000564276 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
PKM-211ENST00000564276 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PKM-211ENST00000564276 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
PKM-211ENST00000564276 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
PKM-211ENST00000564276 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
PKM-211ENST00000564276 NFKBIEO00221 500 aa12.66□□□□□ -0.38
PKM-211ENST00000564276 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
PKM-211ENST00000564276 DDR1Q08345 913 aa12.66□□□□□ -0.38
PKM-211ENST00000564276 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
PKM-211ENST00000564276 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 CYP27B1O15528 508 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.38
PKM-211ENST00000564276 FBLN1P23142 703 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
PKM-211ENST00000564276 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
PKM-211ENST00000564276 SCN4AP35499 1836 aa12.65□□□□□ -0.39
PKM-211ENST00000564276 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 HOXC9P31274 260 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 RFC4P35249 363 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 DGKZQ13574 1117 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
PKM-211ENST00000564276 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
PKM-211ENST00000564276 GRM1Q13255 1194 aa12.63□□□□□ -0.39
PKM-211ENST00000564276 RALBP1Q15311 655 aa12.63□□□□□ -0.39
PKM-211ENST00000564276 CCDC184Q52MB2 194 aa12.63□□□□□ -0.39
PKM-211ENST00000564276 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
PKM-211ENST00000564276 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
PKM-211ENST00000564276 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
PKM-211ENST00000564276 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
PKM-211ENST00000564276 TATP17735 454 aaPredicted RBP12.62□□□□□ -0.39
PKM-211ENST00000564276 FKBP8Q14318 412 aa12.62□□□□□ -0.39
PKM-211ENST00000564276 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
PKM-211ENST00000564276 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
PKM-211ENST00000564276 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
PKM-211ENST00000564276 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
PKM-211ENST00000564276 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
PKM-211ENST00000564276 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
PKM-211ENST00000564276 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
PKM-211ENST00000564276 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
PKM-211ENST00000564276 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
PKM-211ENST00000564276 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
PKM-211ENST00000564276 AMPHP49418 695 aa12.6□□□□□ -0.39
PKM-211ENST00000564276 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
PKM-211ENST00000564276 CAPNS2Q96L46 248 aa12.6□□□□□ -0.39
PKM-211ENST00000564276 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
PKM-211ENST00000564276 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
PKM-211ENST00000564276 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
PKM-211ENST00000564276 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
PKM-211ENST00000564276 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
PKM-211ENST00000564276 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
PKM-211ENST00000564276 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
PKM-211ENST00000564276 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
PKM-211ENST00000564276 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
PKM-211ENST00000564276 KDRP35968 1356 aa12.58□□□□□ -0.4
PKM-211ENST00000564276 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
PKM-211ENST00000564276 AOC2O75106 756 aa12.58□□□□□ -0.4
PKM-211ENST00000564276 RPS6KA4O75676 772 aa12.58□□□□□ -0.4
PKM-211ENST00000564276 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
PKM-211ENST00000564276 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
PKM-211ENST00000564276 TRPM7Q96QT4 1865 aa12.58□□□□□ -0.4
PKM-211ENST00000564276 FMR1Q06787 632 aaKnown RBP eCLIP12.57□□□□□ -0.4
PKM-211ENST00000564276 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
PKM-211ENST00000564276 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
PKM-211ENST00000564276 IQCA1LA6NCM1 817 aa12.56□□□□□ -0.4
PKM-211ENST00000564276 HABP4Q5JVS0 413 aaKnown RBP12.56□□□□□ -0.4
PKM-211ENST00000564276 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
PKM-211ENST00000564276 CNTNAP4Q9C0A0 1308 aa12.56□□□□□ -0.4
PKM-211ENST00000564276 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 NRXN2Q9P2S2 1712 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
PKM-211ENST00000564276 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
PKM-211ENST00000564276 CUL9Q8IWT3 2517 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
PKM-211ENST00000564276 INSRP06213 1382 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 NPC1L1Q9UHC9 1359 aa12.55□□□□□ -0.4
PKM-211ENST00000564276 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
PKM-211ENST00000564276 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
PKM-211ENST00000564276 TM4SF1P30408 202 aa12.54□□□□□ -0.4
PKM-211ENST00000564276 ECE1P42892 770 aa12.54□□□□□ -0.4
PKM-211ENST00000564276 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
PKM-211ENST00000564276 SZT2Q5T011 3432 aa12.54□□□□□ -0.4
PKM-211ENST00000564276 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 DLL1O00548 723 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 C21orf2O43822 256 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
PKM-211ENST00000564276 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
PKM-211ENST00000564276 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
PKM-211ENST00000564276 PANK3Q9H999 370 aa12.53□□□□□ -0.4
PKM-211ENST00000564276 MKI67P46013 3256 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms