RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 CHRNA5P30532 468 aa22■■□□□ 1.11
AC004449.1-201ENST00000564240 KIF13BQ9NQT8 1826 aa22■■□□□ 1.11
AC004449.1-201ENST00000564240 TJP1Q07157 1748 aa22■■□□□ 1.11
AC004449.1-201ENST00000564240 KCNA3P22001 575 aa21.99■■□□□ 1.11
AC004449.1-201ENST00000564240 IL17REQ8NFR9 667 aa21.99■■□□□ 1.11
AC004449.1-201ENST00000564240 A0A087WZG4 1122 aa21.98■■□□□ 1.11
AC004449.1-201ENST00000564240 NFIXQ14938 502 aa21.98■■□□□ 1.11
AC004449.1-201ENST00000564240 BICDL1Q6ZP65 573 aa21.98■■□□□ 1.11
AC004449.1-201ENST00000564240 TEX13AQ9BXU3 409 aaPredicted RBP21.98■■□□□ 1.11
AC004449.1-201ENST00000564240 COL15A1P39059 1388 aa21.98■■□□□ 1.11
AC004449.1-201ENST00000564240 PRKAR2BP31323 418 aa21.97■■□□□ 1.11
AC004449.1-201ENST00000564240 C9orf131Q5VYM1 1079 aa21.97■■□□□ 1.11
AC004449.1-201ENST00000564240 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 SERPINB2P05120 415 aa21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 U2AF1L5P0DN76 240 aaPredicted RBP21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
AC004449.1-201ENST00000564240 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
AC004449.1-201ENST00000564240 MRC1P22897 1456 aa21.95■■□□□ 1.1
AC004449.1-201ENST00000564240 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
AC004449.1-201ENST00000564240 KIF3CO14782 793 aa21.94■■□□□ 1.1
AC004449.1-201ENST00000564240 HSPA6P17066 643 aa21.94■■□□□ 1.1
AC004449.1-201ENST00000564240 PHACTR3Q96KR7 559 aa21.94■■□□□ 1.1
AC004449.1-201ENST00000564240 FMNL2Q96PY5 1086 aa21.94■■□□□ 1.1
AC004449.1-201ENST00000564240 KCPQ6ZWJ8 1503 aa21.93■■□□□ 1.1
AC004449.1-201ENST00000564240 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 NPHP1O15259 732 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 PPP2R1AP30153 589 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 BCL2L12Q9HB09 334 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 RNF181Q9P0P0 153 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
AC004449.1-201ENST00000564240 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
AC004449.1-201ENST00000564240 HEG1Q9ULI3 1381 aa21.91■■□□□ 1.1
AC004449.1-201ENST00000564240 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
AC004449.1-201ENST00000564240 C2CD5Q86YS7 1000 aa21.91■■□□□ 1.1
AC004449.1-201ENST00000564240 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
AC004449.1-201ENST00000564240 H0YIN7 160 aa21.9■■□□□ 1.1
AC004449.1-201ENST00000564240 A1BGP04217 495 aa21.89■■□□□ 1.09
AC004449.1-201ENST00000564240 NEFMP07197 916 aa21.89■■□□□ 1.09
AC004449.1-201ENST00000564240 NMRK2Q9NPI5 230 aa21.89■■□□□ 1.09
AC004449.1-201ENST00000564240 KCNQ3O43525 872 aa21.88■■□□□ 1.09
AC004449.1-201ENST00000564240 TOMM70O94826 608 aa21.88■■□□□ 1.09
AC004449.1-201ENST00000564240 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
AC004449.1-201ENST00000564240 IL6STP40189 918 aaPredicted RBP21.87■■□□□ 1.09
AC004449.1-201ENST00000564240 TBC1D9BQ66K14 1250 aa21.87■■□□□ 1.09
AC004449.1-201ENST00000564240 MCM10Q7L590 875 aa21.87■■□□□ 1.09
AC004449.1-201ENST00000564240 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.09
AC004449.1-201ENST00000564240 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
AC004449.1-201ENST00000564240 ADAMTS7Q9UKP4 1686 aa21.86■■□□□ 1.09
AC004449.1-201ENST00000564240 BRCA1P38398 1863 aaKnown RBP21.86■■□□□ 1.09
AC004449.1-201ENST00000564240 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
AC004449.1-201ENST00000564240 SETDB2Q96T68 719 aa21.85■■□□□ 1.09
AC004449.1-201ENST00000564240 PDE6BP35913 854 aa21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 RASSF7Q02833 373 aa21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 CCDC24Q8N4L8 307 aa21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 RRAGCQ9HB90 399 aa21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 USP16Q9Y5T5 823 aa21.84■■□□□ 1.09
AC004449.1-201ENST00000564240 AFDNP55196 1824 aaKnown RBP21.83■■□□□ 1.09
AC004449.1-201ENST00000564240 DCTN1Q14203 1278 aa21.83■■□□□ 1.09
AC004449.1-201ENST00000564240 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.09
AC004449.1-201ENST00000564240 CEMIPQ8WUJ3 1361 aa21.83■■□□□ 1.08
AC004449.1-201ENST00000564240 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
AC004449.1-201ENST00000564240 SNRPA1P09661 255 aaKnown RBP21.82■■□□□ 1.08
AC004449.1-201ENST00000564240 PIP4K2AP48426 406 aaPredicted RBP21.82■■□□□ 1.08
AC004449.1-201ENST00000564240 APLP1P51693 650 aa21.81■■□□□ 1.08
AC004449.1-201ENST00000564240 BRIP1Q9BX63 1249 aa21.81■■□□□ 1.08
AC004449.1-201ENST00000564240 PDZRN3Q9UPQ7 1066 aa21.81■■□□□ 1.08
AC004449.1-201ENST00000564240 HTATSF1O43719 755 aaKnown RBP21.8■■□□□ 1.08
AC004449.1-201ENST00000564240 LMNB1P20700 586 aa21.8■■□□□ 1.08
AC004449.1-201ENST00000564240 ST5P78524 1137 aa21.8■■□□□ 1.08
AC004449.1-201ENST00000564240 PRR5LQ6MZQ0 368 aa21.8■■□□□ 1.08
AC004449.1-201ENST00000564240 CARMIL3Q8ND23 1372 aa21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 CAMTA2O94983 1202 aa21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 CNBD1Q8NA66 436 aa21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 RBM46Q8TBY0 533 aaKnown RBP21.79■■□□□ 1.08
AC004449.1-201ENST00000564240 C21orf2O43822 256 aa21.77■■□□□ 1.08
AC004449.1-201ENST00000564240 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.08
AC004449.1-201ENST00000564240 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
AC004449.1-201ENST00000564240 NBPF5PQ86XG9 351 aaPredicted RBP21.76■■□□□ 1.07
AC004449.1-201ENST00000564240 SIPA1L3O60292 1781 aaPredicted RBP21.76■■□□□ 1.07
AC004449.1-201ENST00000564240 CNKSR1Q969H4 720 aa21.75■■□□□ 1.07
AC004449.1-201ENST00000564240 SBF1O95248 1867 aa21.75■■□□□ 1.07
AC004449.1-201ENST00000564240 NRXN2Q9P2S2 1712 aa21.75■■□□□ 1.07
AC004449.1-201ENST00000564240 FAM177BA6PVY3 158 aa21.74■■□□□ 1.07
AC004449.1-201ENST00000564240 CLEC4GQ6UXB4 293 aa21.74■■□□□ 1.07
AC004449.1-201ENST00000564240 NGEFQ8N5V2 710 aa21.74■■□□□ 1.07
AC004449.1-201ENST00000564240 PNNQ9H307 717 aaKnown RBP21.74■■□□□ 1.07
AC004449.1-201ENST00000564240 GLTPD2A6NH11 291 aa21.73■■□□□ 1.07
AC004449.1-201ENST00000564240 FSTL1Q12841 308 aa21.73■■□□□ 1.07
AC004449.1-201ENST00000564240 DPY19L2Q6NUT2 758 aa21.73■■□□□ 1.07
AC004449.1-201ENST00000564240 PNISRQ8TF01 805 aaKnown RBP21.73■■□□□ 1.07
AC004449.1-201ENST00000564240 GTF2E1P29083 439 aaPredicted RBP21.72■■□□□ 1.07
AC004449.1-201ENST00000564240 NIP7Q9Y221 180 aaKnown RBP eCLIP21.72■■□□□ 1.07
AC004449.1-201ENST00000564240 MAPK8IP3Q9UPT6 1336 aa21.72■■□□□ 1.07
AC004449.1-201ENST00000564240 ZC3H4Q9UPT8 1303 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms